Danio rerio (zebrafish): 100332340
Help
Entry
100332340 CDS
T01004
Symbol
sorcs1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100332340 (sorcs1)
Membrane trafficking [BR:
dre04131
]
Protein recycling
Others
Others
100332340 (sorcs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
100332340
NCBI-ProteinID:
XP_021332867
ZFIN:
ZDB-GENE-101220-3
UniProt:
A0A8M9PN08
LinkDB
All DBs
Position
1:complement(48583611..48922780)
Genome browser
AA seq
1241 aa
AA seq
DB search
MEREIRYCRVHVRAFCTLLLILFAWVPVAETVITCRSCHLLDKWSGRELLVKMDSGVDSG
KVSDQDGDGSLFNLAGAETGQPDCGASDSGEHAHSVRKRNTESLRSGKTPPDEKWKSMRS
HDKVYHLKRAALRASAPGDPHHRVRRGTQEPGSPQGARFQPLGFGNVTARAARRVPRSEL
RWNRDERRTAASRQEELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLYDFNLGS
VTESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDE
GATYQKYRLNFYILSLLFHPEQEDWILAYSHEQKLYSSVEFGRRWQLVHERVAPNRFYWS
KTGLDKEPGLIHLETSISESQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQ
VSTGGRPIYYVSSRRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVS
ESGGIYYTLALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKLNNEVKTYITYNKGRDW
RLLQAPSADLRGNRIHCMLPYCSLHLHLHVSANPYTSGNIASRESAPGIILASGSIGAEL
TSSNVSMFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWLSFDEGRVWN
KYSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCVESDYVPW
DLHDQGERCLMGVKRVYRKLKATARCVMGKTYSVTMISEPCHCTESDFECDYGFERRTDG
KCTPAFWFPPSSMSRTCTTEHTFLNSTGYRKVVSNNCTGGVIERYTARRQLCPSQAPRGL
HLVTSEGKLTATLASNVTFLVFLEEGDGSKTSITVDFGDGNAFTYSNVSSIEDGIKHIYK
TVGIYRVSATAENSLGSETVLLFLHVTCQLDSIHLSAPFVAVKNKEVNLTVVLYPSQVGT
VTYIWWFGNNSEPVITLDGSVSFTFSREGISIVTVQVSAGNNILQDRKTIAVHEYFRSHL
LAFSSNLDDHNPDVAEWRLDVSRVIKASMMQATGVSPDLLLVTVLPGLPTAAEFFLLPDK
QLTEGKPDKTATHLDQLSEVVLSALNQNLVQFTLRPGVQITVYAAHLSAAPLVDTSENHS
GSAMLMLLSVVVLGLAIFLIYKFKRKIPGLHVYAAMQDETEQEMIQSPVSPTDSTPSSSS
QRELLTSLEPLDTEPNTQTIECIKPHPRVKFSSDLPTYIDV
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggagagggagatcagatattgccgggttcatgtgagggctttttgcaccctgcttttg
attttgttcgcgtgggttccagtggccgaaacagtgataacttgcaggtcatgtcacctg
ctggataagtggagcggtcgggaattactggtcaagatggatagcggtgtcgattctggt
aaagttagtgaccaagatggagacgggtcgctgtttaatttggctggtgctgaaactggt
cagcccgactgcggcgcgagcgacagcggcgaacacgctcactccgtgcgtaaaaggaat
acagagagcctccgctccgggaaaacgccgcccgatgagaaatggaagtcaatgcgcagt
catgacaaagtttatcatctcaagcgggcagctttgcgagcctcagccccaggagatccc
catcaccgagtgcgtagaggcacccaggaacccggctcaccccaaggtgcgcgctttcag
ccgctgggttttggcaacgtgacggcgcgggctgcgcgcagagtcccccggtcggagctc
cgctggaacagggacgaacggagaacggccgcgtcccgacaggaggagctcaaactcacc
agctctacatttgctctgacaggggattccgctcacaaccaagccatggtgcactggtcc
ggccaaaacagcagcgtgatccttatgctgaccaaactgtatgacttcaaccttggaagt
gtgacagagagttccttatggaggtcaaccgattacgggaccacttacgagaagctcaat
gaaaaggtgggcgtaaagaccatcctcagctatctgtacgtcagccccaacaacaagcgc
aagatcatgctgctgacggatccagaggtagagagcagtttgctcatcagctcagacgaa
ggagccacctatcagaaataccgcctcaacttctacatcctcagcctgctgtttcacccc
gagcaggaggactggatcctcgcttatagccacgagcagaagctctacagctctgttgag
tttggccgtcgctggcagcttgttcacgagcgggtggcgcccaatcgattctactggtcc
aaaacgggccttgataaagagccaggcctgattcaccttgagaccagcatctctgaaagc
caggctctttatgtcacatgtaagcttcagaactgcactgatgccaacaagggaaaacct
ttccccggatacattgacccaaactcactggtggtccaggatgagtatgtgtttgtccag
gtgtcaaccggtggtcggccaatctattacgtgtcatccagacgagacgtgtttacaccc
atgaagcttcccaaatacacccttccaaaggatctacatgtgatcagtacagacgagaac
cgggtggtggcagcggtccaggagtggaaccagaatgacacttacaacctgtacgtgtcc
gagtccggaggcatttactacacgctggctctggagaacgtcatgagcagtatgggccca
gagggaaacgtcatgatagatctctatgaggtggccgggataaaaggcatgttcctagcc
aataagaagctaaataatgaggtaaagacatatataacctataacaaaggacgggactgg
aggctcctgcaggctccgtcggcggatctcagaggaaaccgcattcactgcatgttgccg
tactgttctctgcatcttcacctgcacgtgtctgcaaacccatacacatctggaaacatt
gccagccgagagtcagcacctggaatcatactggcgtcaggttcgataggcgcggagtta
acaagcagcaacgttagcatgttcatcacatccgacgctggaaacacgtggcggcagatc
ttcgacgaggagtacagcgttctgtatctggatcagggcggagctttagtggccatcaga
cacacccctctccccataaggcacctctggttgagttttgatgaaggcagagtgtggaat
aagtacagcttcacctcctctcctctgtttgtggatggagttttgggtgaaccgggtgag
gagacgctcatcatgacgatctttggtcacgtcagtcaccgctctgaatggcagctggtg
aagattgacttcaggtccatctttaacaggagatgtgtagaatctgactatgtgccgtgg
gacttacacgaccagggcgagcgatgccttatgggagttaaaagagtctacaggaagctg
aaggccacagccaggtgtgttatgggtaaaacctactccgtcaccatgatctctgagccc
tgtcactgcaccgagtcggactttgagtgtgattatggttttgagagaaggactgatggg
aaatgtactccagcgttctggtttccaccgtcctccatgtctcgaacctgcactacagag
cacacattcctcaacagcactgggtacaggaaggttgtgtctaataactgcacaggcggt
gtgatagagcgatacacggcccgcagacagctgtgccccagtcaggctcctcgtggcctt
catttagtgaccagcgaagggaagctcacagccactctggccagcaacgtcacattcctt
gtcttcttggaggagggtgacggatcgaaaaccagcatcactgtggatttcggcgatgga
aacgccttcacttactccaacgtgagctccatcgaggatggcattaaacacatttacaag
actgtgggcatctaccgagtgtcagccacggcggagaacagtctgggctcagaaacggtg
ctcctcttcctacacgttacatgtcagttggactctatccatctctccgctccttttgta
gctgtgaaaaataaagaagtcaatctgacggtggttctctaccccagccaagtaggaaca
gtcacctacatctggtggtttgggaacaattccgagcctgtgatcacgctggatgggagt
gtgtccttcaccttctccagagagggaatcagcatcgtcaccgtacaggtttctgctggg
aacaacatcctgcaggacaggaaaaccatcgccgtccacgaatacttcaggtctcatctt
cttgccttttcgtccaatctggatgatcataaccctgatgtggccgaatggagactcgat
gtgagtcgagtcattaaagcctccatgatgcaggccacaggagtgagtccagatctgctg
ctggtgactgttctgcctggactgcccacagcagccgagttctttctgctaccagacaaa
cagctcacagagggaaaaccagacaaaactgccacgcatttagaccagctttcagaagtg
gtgctcagcgctctcaatcagaacctggtacagttcacactcagaccaggagtccagata
actgtttacgctgctcatttatcagcagcgcctctagtggacaccagtgagaatcacagc
ggctcagcgatgctcatgctcctctctgtggtggtgctgggtttagccattttcctcatc
tataaatttaaaaggaagatcccaggcctccacgtctatgcagcgatgcaggacgaaaca
gagcaagaaatgatccagagtccagtttctcctactgacagcacacccagcagcagctcg
cagagagaactgctcacttcactggagcctctggacacagagcccaacacacagaccatc
gaatgcatcaaacctcatccacgcgtcaaattctcatcagatcttcctacatacattgac
gtttga
DBGET
integrated database retrieval system
