Danio rerio (zebrafish): 100333101
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Entry
100333101 CDS
T01004
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04020
Calcium signaling pathway
dre04080
Neuroactive ligand-receptor interaction
dre04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100333101 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100333101 (grin3bb)
04082 Neuroactive ligand signaling
100333101 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
100333101 (grin3bb)
Ion channels [BR:
dre04040
]
Ligand-gated channels
Glutamate (ionotropic)
100333101 (grin3bb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Uds1
GT4-conflict
Mis12
Motif
Other DBs
NCBI-GeneID:
100333101
NCBI-ProteinID:
XP_017213803
ZFIN:
ZDB-GENE-131122-77
Ensembl:
ENSDARG00000098667
UniProt:
A0AB32TX86
A0A8M6Z151
LinkDB
All DBs
Position
11:14366186..14562129
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AA seq
1114 aa
AA seq
DB search
MNFIFYTFLAYFYLGSQIFLLHTLLLLQPAHSHPQPCHILARIGHTVRLGALLPPRQSVR
VRAALHRALSGLAESGNNFLPYNLSLDVVAREAQSGDPESLFRCVCQDIVVQGVSAVLAF
PQTQEEIVQMEFMSSFLEIPFISIIEHGEPLKTQNRFHLQMTTRIPPSGLVELLLAVLQR
SGWEESMAVLCHGWEDAGLLDLLKLQGRFGWGPSQWHLRAALNLSHSTARMANISDFLSE
HFNLDHSPPASVLLFGADPECASSVLRSAHDLGLTLPTVHWIMGHPLSPDALHSIGLPLG
LLAYGEVDHKPLDFYISDALQLINRAVTAATVVRPDLALIQNMVNCFDKPNKHELPSSGQ
YIARFLSNTSFVGLTGPVIVQRNLSRVHTSHKVHIWSLRRDAVGQPTWVTVGSWEGGRLN
VEEQGLWQGSSPRQRTEGQMGREGRRWRAGFPVSGSRLRVVTLVEHPFVFTREVDEDGNC
PAGQYCLDAGTNSSETLDHLYAERAQGNKSFLPPDYSKCCYGYCIDLLEKLSEDMNFEFD
LYIVGDGKYGAVKGGQWTGLVGDLLSGVADMAVTSFSINSARSKVIDFTSPFFSTSLGIL
VRSKDTAAPIGAFMWPLHWSMWMGIFVALHITALFLTLYEWKSPFGMTPHGRNRVKVFSY
SSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEE
VSGIHDAKLHHPSQGFRFGTVRESSAEDYMKKSFPEMHEYMRKFNEPTTPDGVATLKTDP
PQLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTSNISEFVSRYKS
DGYMDMLHDKWYKVVPCGKRVFAVTETLQMGIRHFSGLFVLLCVGVTGALLTLAGEHAFY
RLVLPHIRRKQKFKYWLHTSQKIHRALNMTYEDVKRQRANTEKSCNIQKAQPHPPPQPAP
LGSFARWNNESAKVAQEPKDNKRVHFNLETLNTRRLLPRVVSDGGQTSSASTLSSGAGSL
LARVCENGGPVQRATSSVRSSSPSGQDELEELQTKIEEIRGHLKAALARRAELQTTLAKE
RAAAALTTATTTAPPTVTATICPALTKEPTDLKR
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcatcttctacacatttctggcatacttttatttgggatcgcaaatcttcctt
ctccatactctccttcttctccagcccgctcattctcacccgcagccctgtcacatccta
gcgcggataggacacaccgtgcgcctgggtgcgctcctgcctccccgccagtcggtccgg
gtgcgggcggctctccaccgcgccctcagcggtctcgccgaaagcggcaacaactttctt
ccgtacaacttgagcctggacgtggtggctcgagaagcccagagcggagaccccgagtcg
ctcttcaggtgtgtgtgtcaggatattgtggtccagggggtctcggctgtgctcgccttc
cctcagacgcaagaggaaatagtacaaatggaatttatgtcttcttttttggaaatccct
tttataagcatcattgagcacggagaacccctcaaaactcagaatcgtttccacttgcag
atgacgactcgtattcctccatcgggattagtggagctacttctggccgttttgcagcgc
agtggctgggaagagagcatggcagttctttgccatggttgggaggatgctggtcttctg
gatctcctaaaactccaaggccgctttggctggggaccttcacaatggcacctgcgggcc
gctcttaatctctctcacagcacagctcgcatggctaacatttctgacttcctgtctgag
cactttaatctggaccattctcctcctgcctcagtcctgctttttggggctgacccggag
tgtgcctcatcagttctgcgcagcgcgcatgacctggggttgacattgcccactgtacat
tggattatgggacatcctttaagcccagatgctcttcattccattggcctgcctttagga
ctgctggcctatggagaggtcgaccacaaaccactggatttctacattagtgatgccctg
cagttgatcaacagagctgttacagctgcaactgttgtacggcctgatctagctcttatc
caaaatatggtcaactgttttgacaaacccaacaaacacgaactaccctcatcaggacaa
tacattgccaggttcctctctaatacatcctttgtagggttgacaggccctgtcatcgtt
caacgcaacctttctcgtgtacacacgtctcataaggtccacatttggagtcttcgacgg
gatgccgtcggtcagcctacgtgggtaactgtaggtagctgggaaggtggtaggttgaat
gtggaggaacagggcttatggcaaggctcatcacctcggcagcgcacggagggccagatg
ggcagggaaggacgtagatggcgagctggctttcctgtgtctgggagtcgtctacgtgtg
gtcactctggtggagcacccgttcgtgttcactcgagaggtagatgaggatggaaactgt
cctgctgggcaatattgtctggatgcaggaacaaacagttcagaaaccttagatcatttg
tacgctgagcgggctcaaggcaacaaaagcttcttgccaccggattacagcaagtgttgc
tacggatactgtattgatttattggagaagctgtcagaagacatgaactttgagtttgac
ctgtacatagttggagatgggaaatatggggctgtcaagggagggcagtggacaggtctg
gtgggtgacctcttaagtggagtagctgatatggctgttaccagttttagcatcaactcg
gctcgcagtaaggtgattgatttcactagtccattcttttcaacaagtttgggaatactg
gtgcgcagtaaagacacagcagcacctattggagcattcatgtggcctttacactggtcc
atgtggatgggaatttttgtggcgctgcacattacagcactgttcctcactctctacgaa
tggaagagtccctttggcatgacgcctcatggacgaaaccgtgtaaaggtcttttcctat
tcttcagccctcaacctctgctacgccatcctctttggccgaacagtctctagtaagaca
ccaaagtgttggactggacgtttcctaatgaatctatgggccatattttgcctgctggtt
ttgtccagttacacagcaaacctagctgcagtgatggttggggaaaagacctttgaagaa
gtgtcaggaatacatgatgccaagcttcatcacccctctcagggattccgatttggcaca
gttcgggaaagcagtgcagaggattatatgaaaaagagttttcctgagatgcacgaatat
atgcggaaattcaatgaacctaccacacctgatggagtcgccactctaaagacagatccg
cctcaacttgatgcgtttatcatggacaaagccctgctggactatgaggtgtccattgat
gctgactgcaagttactgacagttggtaaaccctttgcaattgaaggctacgggatcggt
cttccccagaactcacctctaacctccaacatatctgaattcgtcagccgttacaagtca
gacggctacatggacatgctgcatgacaagtggtacaaggtggtgccgtgcggaaagaga
gtttttgctgttaccgagacactgcagatggggattcgtcacttctcagggttatttgtg
ttgctgtgtgttggtgtgactggggccttacttactctggcaggagagcatgccttctat
cgcctggttcttccacatatacgccgcaaacagaagttcaaatactggcttcatactagt
cagaaaatccacagagcactgaacatgacttacgaggatgtgaaacggcagcgggcaaac
acagagaaaagctgtaacattcagaaagcccagccgcatcctccacctcaacctgctccg
cttggatcatttgccaggtggaacaacgagagtgccaaggtagcacaggagcctaaagac
aacaagagggtccatttcaacctggagaccctcaacacccgtcgactcctcccccgagtt
gtgtcagacgggggccaaaccagctccgcctccacgttgagttctggggctgggagttta
ttggcgagagtgtgtgaaaatggggggcctgttcagcgggccacctcgtcagtgagatcc
tcgagcccctccggacaggacgagctggaggagctccagacgaagattgaggaaatccgt
ggacatttgaaagctgctctggctcgcagggctgaacttcagacaacactggctaaagag
agagcggctgctgctctcaccacggcaacaacgactgctccgcccacagtcacagctacc
atttgccccgccctcaccaaagagccgacagatttaaaaaggtag
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