Danio rerio (zebrafish): 100333378
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Entry
100333378 CDS
T01004
Symbol
si:ch73-236c18.7
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dre04054
]
100333378 (si:ch73-236c18.7)
Pattern recognition receptors [BR:
dre04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100333378 (si:ch73-236c18.7)
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Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
100333378
NCBI-ProteinID:
XP_068076985
ZFIN:
ZDB-GENE-121214-3
Ensembl:
ENSDARG00000098706
UniProt:
A0AB32TNF8
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All DBs
Position
1:58470302..58476253
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AA seq
1054 aa
AA seq
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MSLSKRKGSKMSSASPGSTCVSMKSDQSKNFVSPQINDGTVTSDLSISRKQISESPEPSG
VSVKSSRSMEQRHTFSDGPTTSKRPNREIHEQTKLVSSIKFNLQTHKKQENQETVLKTQA
QETGDLQRVKDKLKTSLKKKYERLFEGNTLQENQTLLNRIYTQLYIIEGESEGVNEEHEV
LQMEKTARTKHSQHTPIYCNDIFKEEKEQIKTVLTKGIAGIGKTVSVQKFILDWAEGKAN
QDVDFMFVLPFRELNLIRDHQYSLHTLLLDFHPELEDLEPKIYEECKVVFIFDGLDESRI
TLMFSDAQKVCDVTETSSVAVLMSKLMKGELLPSALIWITSRPAAANQIPSKYIKRLTEI
QGFTEPQKEEYFRKRISEQHQASRIISHIRRARSLHIMCHIPVFCWISSTVLQKLLEEDL
SAEIPQTLTEMYIHFLLIQINMRNQKYEERDPEKLLQSNREVIVKLAEVAFRQLMKGNVM
FYEEDLIESGVDVSDASVYSGICTEIFKEESVIQQRKVYSFIHLSVQEFLAAFYVFYYHV
NTTMDGLRNFASVENLLKGAVDKTIESENGYLDLFLRFLLGVSLESNQRLFQDLLTHTEK
SSKSIRRSTQYIKEKIRDGHGLSTERSINLFLCLLEVKDQTLSREIQEFVKSDKQSEKKL
SPAHCSTIAYMLQMSEEVLDELELQKYNTSDEGRRRLIPAVSNCTRALLVFNLVKRHCXM
KFAFLVLNXXMLSIFXVKLNSRLFCSSFSLAGCNLSAQDCEIVSSVLQSSNCVLRELDLS
NNDLQDSGVKLLSDGLKSPNCQLEILRLSGCMVTEEGCGFLSSALSSNPSHLRELDLSYN
HPGQSGVQLLQHTLEDPHYTLQKLNLDYEGHFRIISGLRKYAVNITLDPNTAHNQLILSD
GNKTATHVTDPQPYPDHPDRFDQQEQVLCRETLTGRCYWEVKWSGSGHVGVAYKAIERKS
GSNCRFGRNEHSWSLYCCDEVYCSWHNNKSDDITAPSSKTNRVGVYVDVPAGSLSFYSVS
DTLTLIHTFNTTFTEDIYAGFVVYPASSVSLLDI
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcagcaagagaaagggctctaaaatgagttctgcatctcctggatcaacctgc
gtgtctatgaagagtgatcaatccaagaattttgtttctccacaaatcaatgatggaaca
gtgacctctgacctcagcatcagtagaaagcaaatttcagagtctccagaacccagtggt
gtgtctgtgaagagtagcagatccatggagcaacgtcatacattcagtgatggaccaaca
acctcaaaacgacccaacagagaaatccatgaacagaccaaattggtgtcgtcaattaaa
ttcaacttacaaactcacaaaaaacaggagaatcaagaaacagttcttaagacacaagca
caggaaactggagacctgcagagagtcaaagacaaactcaaaaccagtttgaagaaaaaa
tatgagagattatttgagggaaacacactccaagagaaccaaaccctcctgaaccggatc
tacacccagctgtacatcatagagggagagagtgaaggagtgaatgaagaacatgaggtt
ttacagatggagaaaacagccagaacaaaacactcccaacacactccaatctactgcaat
gacatctttaaagaggagaaagagcaaatcaagactgttcttactaaaggcatcgctgga
atcggaaaaaccgtctctgtgcagaagttcattctggactgggccgagggaaaagccaat
caggatgtagatttcatgtttgtgcttccatttcgagagctgaacttgatcagagatcat
cagtacagtcttcacacacttctgctggactttcatcctgaacttgaagatctggagccc
aagatttatgaggagtgtaaagttgtgttcatctttgatggtctggatgaaagcagaatc
acactgatgttttcagacgctcagaaagtttgtgatgtgactgagacttcatcagtggct
gtgttgatgtcaaagctgatgaaaggagagctgcttccctctgctctcatctggatcacc
tccagaccagcagcagccaatcagatcccctccaaatacatcaagcgtctgacagaaatt
cagggattcactgagcctcagaaggaggaatatttcaggaagagaatcagtgagcagcat
caagccagcagaatcatctcacacatcagaagagcaagaagcctccacatcatgtgccac
atacccgtcttctgctggatctcatccactgtgcttcagaagctcctggaagaagatctg
agtgcagaaatccctcaaactctgactgaaatgtacatccacttcctgctgattcagatc
aacatgaggaatcagaagtatgaagagagagatccagagaaactcctgcagtccaacaga
gaagtgattgtcaaacttgctgaagtggctttcagacagctgatgaagggcaatgtgatg
ttctatgaggaggacctgattgagagcggcgtagacgtctctgacgcctcagtgtattct
gggatttgcactgagatctttaaggaggaatctgtgattcagcagaggaaagtctacagc
ttcatccatctgagtgttcaggagttcctcgctgctttctatgtgttttactaccatgtg
aacacaactatggatggactgaggaattttgcctcggtcgaaaacctgcttaaaggtgct
gtagataaaaccattgagagtgagaatggttatctggatctgttcctgcggttcctgctg
ggcgtctcactggagtccaatcagagactcttccaggatctactgacacacacagagaag
agctcaaagagcatcaggagaagcacacagtacattaaagagaagatcagagatggacat
ggactctccactgaaagatccatcaatctgttcctctgtctgctggaagtgaaagatcag
actctgtccagagagattcaggagtttgtgaaatcagacaaacagtcagagaagaaactc
tctcctgctcactgctcaacaatcgcctacatgcttcagatgtcagaggaggtgctggat
gagctggagctccagaaatacaacacatcagatgagggcaggagaagactgataccagcc
gtcagcaactgcacaagagctctgttagtgtttaatctggtgaagagacattgctgaatg
aaatttgcatttctggtattgaattaataaatgttgagtattttttaggtaaaactgaat
tctcgtttgttctgctcttctttcagtcttgctggctgtaatctctctgctcaggattgt
gaaattgtgtcgtcagttcttcaatcctcaaactgtgtgctgagagagctggacctgagt
aacaatgacctgcaggattcaggagtgaagctgctctctgatggactgaagagtccaaac
tgtcagctggagatactgaggttgtctggctgtatggtgacagaggaaggctgtggtttt
ctatcttcagctctaagttcaaacccctcacacctgagagagctggatctgagctacaat
cacccaggacaatcaggagtccagctgctccaacacacactggaggatccacactacaca
ctgcagaaactcaatttggattatgaaggacatttcaggatcatatctggactgaggaaa
tatgcagttaatatcacactggatccaaacacagcacacaatcaactcatcctgtctgat
ggaaacaaaacagcaacacatgtgacagatcctcagccgtatcctgatcatccagacaga
tttgatcaacaggagcaggttctgtgtagagagactctgactggacgctgttactgggag
gtgaaatggagcggctctggtcatgtaggtgttgcttataaagcgatcgagagaaaaagt
gggagtaattgtcgatttggacgcaatgaacactcttggagtctgtactgctgtgatgag
gtttactgttcctggcacaataacaagagtgatgatattactgctccttcatctaagact
aatagagtaggagtgtatgtggatgtgccggccggttctctgtccttctacagtgtctct
gacacactcacactcatacacacattcaacaccacattcactgaagacatctatgctgga
tttgtggtttatcctgcatcttcagtgtctcttttggatatttaa
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