Danio rerio (zebrafish): 100333625
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Entry
100333625 CDS
T01004
Name
(RefSeq) dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100333625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100333625
Membrane trafficking [BR:
dre04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100333625
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
100333625
RAVE complex
100333625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
NBCH_WD40
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
100333625
NCBI-ProteinID:
XP_021326743
Ensembl:
ENSDARG00000098599
UniProt:
A0A8M9PIH9
LinkDB
All DBs
Position
Unknown
AA seq
2905 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGRIHNQPFTAYASGCDIVILGSDFERIQIIPGANHGNVQV
GCVDCSPQGGQIAASYGNIVCVFEPLEVSPEGKAQKKLNYQWQKSGQFALPSTAHILTWH
PSGSCLLTGSVCVQLWCDVCFSTHTEDEAAAELHSWRCVWQCRSAAPTHFIKFSPDGEFF
ATAGQDDCLVKVWYSTRKWQTDVTKLFSPPELPSAAESNFSFIYLAHPRSVTGFSWRKTS
RYMPSGTMCNVLLTCCKDSVCRLWAETLLPSDCLLSGHNHSSTDPMKNNNRKKSSASTTR
TLNQNHSPLELNLKQAWRDEVRSLSQLSYSDPLPQQQNKHYTHRPKILHANALCHFHIAA
SINPATDIPLLPSISSMIGCDEDDACGSFTVHWLNNKELHLTLSMEVFLQQLRSSAEPNT
QHCDADASAAVGSSSSPPGAAAGGAAVDHHLDLLLSDWNRAADMLFCIHPMDGSLLVWNV
DWLDEYQPGMFRQAQVSFVSRIPVAFPTGDANSLSGSVVMYACNRNVDLALQQGRQRPAG
LHSSSALITQNKPSCSSLRLSIFTPSVLMISKHTDGSLNQWAVSFAEDSAFSTVLSVSHK
SRYCGHRFHLNDLACHSVLPLLLTTSHHNTQNQTQSPSPTQTASRRSRVASGGVGQDPNA
VYSELILWRVDPVGPLSFSGGVSELARVNSLHTSAFSNVAWLPTLIPSNCLGVYGNSPSA
CFIASDGHSLRLYQAIIEAKKLLSELSNPDISKYVGEVFNIISQQSTARPGCIIELDAIT
EFQGKETQMLHVFEEQLILGNHNTEEVEEESVSRQTLFSARFFLVVVEITQSRRSLLHMW
HLQLHAEPVSMEQTQPPAEKQTVSPSAQCNFESVSSSRSKLSTSNLQSACRLSLTSSRVY
SQEMQLPQGVEVLRVTPAAGHLSSSSLQPAGQAPYLLATSCSDGSVRFWRCSTACAEHTY
VWEEWPLLVEAGVANSSALNVCGAIAGLSCCHTSRIAVAHRSAHTHLSADTHLSADTHLS
ADTLMHISIFQCESTGGSQWILEQKLTVSGDAEKLSESFINNNNNNITSKGIKRQVHLDW
VSREDGAHILTVGLGSKLYMYGLLSGKPPDLGSSDCSRELRFCRLVLLRVVDLVSSVEGS
PPIPVSLSWVRDGILVVGMDCEMHVYSQWQPASLHRHALSSSSGSAASLKQDGLSPNPSK
KTLSRSMRSLAQKLSGKRTVLDLPQEMQDCGLFEAAHQLFPTLPQYHPVQLLELMDLGKM
RRAKAILAHLVKSIAGEVVSLKGQERRVRSLTISTSGSTTRDPREMFSRTESADYTEIDS
IPPLPLYALLAADEETATNANERTDALTDSVSAHGVLTSSHKDAYDELFVGGGGAVEDLD
PFDDDDDDENDASAKVIDLSKYSPVFFGPEQAQVLSGHLLHSSLPGLSRIEQMSLMALAD
TIASTSTAIGDSTGGETLDECGLKFLLAVRLHTFLLTSLPPAHRAPLLCQGLSTCHYAWA
FHSEAEEELLNLLPALQRGEPSWPELRAMGVGWWLRSNNKLRRCIEKVAKAAYQRNNDPL
DAALFYLAMKKKAVVWGLYRSQQNVKMTAFFSNSFSEERWRRAALKNAFSLLGKQRFQHS
AAFFLLAGSLKDAVEVCIEKLQDLQLALVICRLYECDFEMSCSYKRILQRHVLGQEQLSA
NQDPFLRSMAFWVLEDYSGALDTLLEEPQADGSSLSSSCNPEVFNFYLYLRTHPLLLRRH
LGSAGAAGVGLQGESRPLDSISLTERRLFFTAAYAHLQAGCPMLALEVLSKMPAVVKSSG
VHSASAGLEKNSSQRQQTSAVDWSPAVQNGLDSVSSLSSPREDSQSDSVLSFDWSQPSVT
LQDEPLELHWEDEEEDDEEESGLAMKSIHPDREHSLTPEQGAAASPSSPCADSSSSSGVV
LPLSSDMLAAQLKFSSCLKMLTAELRTLSTGCELDGGKLRHQLSVWLEREVAALQKSCGY
NPLLEPQPQHRRRHWLQKNQPLLRIFLSYCSLHGSHGGGLASVRMELILLLQESQQDGGL
QVSVPAPQHLSVPLFLAWTASSKTVVANPIMHLTNLTHDVLHTITALDTPPHPDLINNEI
YVMHTLAASLSACIYQCLCDGHNYSHVNPFTGSSYQSVLLTHQPSVRSGSVEDSVLPDTI
PSQWPGVSVLMRLLSASGEENQPGVSVLLCEILTAVFLSLFVHGLATHSTHQLYRTVAHP
LNSRLWVSVFGGGARNPAPQKPGSPSVEDAERRQRRFRLPSSRSNSRETPDSPLSPRPSA
TEPETSVIKERFVPPELSIWDYFIAKPFVPPSGSVVEYDSDDSQGSEEEEDEEEEEGDAL
DSNSPMTEHSNNNSYSWCLMRLAMVQMIQINLKAFYPMAGHDLLDLPVCSPLCHAALKTL
QRWEQLLLKRMEVFGGPPSELISTQMLEQSVSPGPALLRHKALIEPANTPFRSRRRSALP
VRRLWQYLVKQEEIQETFIRNIFTKKRDQNEETDSVKVPLESTHTQIEADLGYPGGKARI
IHKESDIITAFAINKANRNCLVIASTHDIQELDVSSILATQILTWIDDEAEAEVKGTDDF
LVVHARDDFNTLHGTTPYTHSSPGTPINMPWLGGLQTGRGAAVLIKRNINNVRRMTSHPT
LPYYLTGAQDGSVRMFEWGHSQQITCYRSPGNSRVTRIRFNYQGNKFGIVDGDGALSLWQ
TSTSGNAPKPYLTLQCHNKTANDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTPAYSLVH
GFVCHDSGSTALALACKQQLLLSGGRRGFITLLDLSVKLQRQSFQAHDSPVKALAVDSSE
SCFISGSAEGNIKVWSMNTQSLLHSFINEHSRQSLFRNLGTGVMQIEAAPANQLFSCGAD
GTMKMRVLPDALSGSGGRNDVRFIM
NT seq
8718 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcatcaggtgctcacgggcgccgtcaaccctggagacaactgcttctctgtg
ggacgcatacacaaccagcccttcacggcgtacgcctctggctgtgacatcgtgattctg
ggcagtgactttgaaaggattcagatcatcccaggagccaatcatggcaacgttcaggtg
ggctgcgtggactgttcaccacagggcggacagatcgcagcgtcgtacgggaacatcgtg
tgtgtgtttgagccgctggaggtcagtccggaagggaaagcacagaaaaagctgaattat
cagtggcagaagagtgggcagtttgcacttccgtccaccgcacacatcctgacctggcat
cccagcgggtcgtgtctgctgacgggctcggtgtgtgtgcagttgtggtgtgatgtgtgt
ttcagcacacacactgaagatgaagctgctgctgagctgcactcctggagatgtgtgtgg
cagtgcaggtctgccgctcccacacacttcatcaagttttcccctgatggagagtttttc
gccactgcaggacaggacgactgtttggtgaaggtgtggtacagcaccaggaaatggcag
acggacgtcaccaaactcttcagcccgccagagctgccgtctgcagccgagagcaacttc
tccttcatctatctggcacatccacgctccgttacaggcttctcctggaggaagaccagc
agatacatgcccagtggcaccatgtgtaacgtgctgctgacctgctgtaaggacagtgtg
tgtcgactgtgggctgaaactctgctgcccagcgactgcctgctgtcaggacacaatcac
agcagcaccgacccgatgaagaacaacaacaggaagaagagcagcgccagcaccacccgc
acgctcaaccagaaccacagcccgctggagctgaacctgaagcaggcgtggagagatgag
gtgcgctctctctctcagctctcctactcggaccctctgccacagcagcagaacaaacac
tacacacaccgacccaagatcctgcacgccaacgcactctgccacttccacatcgcggcc
agcataaacccagccacagatatccctcttctaccctccatctcctccatgattggctgt
gatgaggatgatgcgtgcggatccttcactgttcattggctgaataataaagagctgcac
ctgacgctgagcatggaggtgtttctgcagcagctgaggagcagtgcagagcccaacaca
cagcactgcgatgcggatgcgagtgcagctgtgggctcctccagttctcctccaggcgca
gcagcaggcggtgcagcagtggatcatcatctggatctgctgctgtcggactggaacaga
gctgctgatatgctcttctgcattcaccccatggacggatctctgctggtgtggaacgtg
gactggctggacgagtaccagcccggcatgttccgacaggcgcaggtgtcgttcgtgtcc
aggatcccggtggcgttccccacgggcgacgctaactctctgagcggcagtgtggtgatg
tacgcctgcaacaggaatgtggatctggcgctccagcaggggcgtcagcggcccgccggc
ctgcactcgtcctccgccctgatcacccagaacaagccctcgtgcagcagtctgcgcctc
agcatcttcaccccgagtgtcctgatgatctccaaacacactgacggatccctcaaccag
tgggcggtgagcttcgccgaggactctgccttctccacggtgctcagcgtgtcccataaa
tcccggtactgcggacaccgcttccacctcaatgacctggcctgccactcggtgctgccg
ctgctgctgaccacctcacaccacaacacccagaaccaaacccagagcccatccccgacc
cagactgcgtcccgcaggagcagagtggcgtcgggtggagtgggccaggatcccaatgcg
gtgtacagtgagctgatcctgtggcgagtggatcccgtcgggccgctctccttctctggt
ggcgtctcggagctggcgcgggtcaactctctgcacacctctgcattctccaatgtggcc
tggctgcccacgctcatccccagcaactgcctcggtgtgtatggaaactcacccagcgca
tgcttcatcgccagcgacggacactcgctcagactctaccaggctattattgaggccaaa
aaactgctgagcgaactctccaaccctgacatctctaaatatgtaggagaggtgttcaac
atcatcagccagcagtccacggcccgacccggctgcatcatcgagctggacgccatcaca
gagtttcaggggaaggagacgcagatgctgcatgtgtttgaggagcagctgatcctagga
aaccacaacacagaggaggtggaagaggagtctgtttccaggcagacgctgttctcggcg
cggttcttcctggtggtggtggagatcacacagagccgcaggtcactcctgcacatgtgg
catctacagctccacgcagagcccgtcagcatggagcaaactcagcctcctgcagaaaag
cagacggtctctccatcagcccagtgtaactttgagtcggtcagttcctccagatctaaa
ctgagcacctccaacctgcagagcgcctgccggctcagcctgaccagcagcagagtctac
agccaggagatgcagctcccgcagggggtggaggttctacgggtcacgcctgctgcaggt
cacctgagctcctcgtccctgcagccggccggtcaggctccgtatctgctggccacctcc
tgctcagacggcagcgtgcgcttctggcggtgcagcaccgcgtgtgcagagcacacatac
gtgtgggaggagtggcctctgctggtggaggcaggcgtggccaacagcagcgcgctgaac
gtgtgcggagcgatcgcaggcctcagctgctgccacaccagcagaatcgccgtcgcacac
cgcagcgcgcacacacacctcagcgcagacacacacctcagcgcagacacacacctcagc
gcagacacactcatgcacatcagcatcttccagtgcgagtccaccggcggctcccagtgg
atcctggagcagaagctgacggtcagcggagacgcagagaaactcagcgagagtttcatc
aataataataataataacatcacgtctaaaggcatcaagaggcaggtgcacctggactgg
gtgtccagagaggacggcgctcacatattaactgtaggtttaggatcgaagctctacatg
tacgggctgctctccggaaagcctccagatctgggctcctcagactgcagcagggagctc
cgcttctgccggctggtgctgctcagggttgtggatctggtgtcgtccgtcgagggatct
ccacctattcctgtctctctgtcctgggtgcgggatgggatcctggtggtggggatggac
tgcgagatgcatgtgtattctcagtggcagccggcctcattgcacagacacgctctcagc
agcagctccggcagcgctgcttcgttgaagcaagacggactgagcccgaaccccagtaag
aagactctatccaggtccatgaggagtctggcgcagaagctgagcgggaagaggacggtg
ctggacctgccgcaggagatgcaggactgtgggctgttcgaggcggctcatcagctgttc
cccacgctgccgcagtaccaccccgtgcagctgctggagctcatggacctgggaaagatg
cggcgtgccaaagccatcctggcacacctggtgaagagcatcgccggagaggtggtgtcc
ttgaagggtcaggagcggcgtgttcgttctctcaccatcagcaccagcggcagcaccacc
cgcgacccacgagagatgttcagccggacggagagcgcagactacactgagatcgactcc
atcccgccgctgccgctgtacgcactgctagctgctgacgaggagacggccaccaatgct
aacgagcgcactgacgccctgacggacagtgtatcagcccatggtgtgctcacctccagc
cacaaggatgcatatgacgagctctttgtgggcggcgggggcgctgtggaggatctggac
ccttttgatgatgacgacgatgatgagaatgatgctagcgctaaagtgatcgacctgtcc
aaatacagccctgtgttcttcgggccggagcaggctcaggtgctgtcgggtcacctgctg
cactccagcctgccggggctctcgaggatagagcagatgtctctgatggcgctcgctgac
accatcgcctccaccagcaccgccatcggggacagcacaggtggagagacgctggatgaa
tgtgggctgaagttcctgttagctgttcgtctgcacacattcctgctgacgtctctgcct
ccggctcaccgcgctccgctcctctgtcagggtctgtccacctgtcattacgcctgggcg
tttcactcagaggcagaggaggagctgctgaacctgctgccggcgctgcagagaggagag
ccgtcctggccggagctcagggcgatgggtgtgggctggtggctccgcagcaacaacaaa
ctgcgcagatgcatcgagaaggtggccaaagctgcttatcagaggaacaacgacccgctg
gacgctgcgctgttctacctggccatgaagaagaaagcagtggtgtggggactgtacagg
tctcagcagaatgtgaagatgacggcgttcttcagtaacagtttcagtgaggagcgctgg
aggagagcggcgctgaagaacgccttctctctgctggggaaacagcgcttccagcactcc
gctgccttcttcctgctcgccggatcactcaaagacgccgtcgaggtgtgtatagagaag
ctgcaggatctccagctggctctggtcatctgtcggctgtacgagtgtgacttcgagatg
tcctgctcctataagcggatcctgcagaggcatgtgttgggtcaggagcagctttctgcc
aatcaggacccgttcctgcgcagcatggccttctgggtactggaggactacagcggagct
ctggacacgctgctggaggagccgcaagccgacggaagcagcctgtcttcttcctgtaac
cctgaggtgttcaacttctacctgtacttgcgcacacaccctctgctgctgcgccggcac
ctgggctccgcgggggcagccggtgtgggtctgcagggcgagagtcggccgctggactcc
atcagtctgactgagcgcaggctcttcttcacggctgcgtacgctcacctgcaggccgga
tgccccatgctggctctggaagtgctctccaagatgcccgcagtggtgaagagctctgga
gtgcacagcgcctctgcaggcctggagaagaacagcagccagagacagcagacgtcagct
gtggactggtctccggcggtgcagaacgggctggactcagtgtcgtcactgtcgtctcca
cgtgaggacagtcagtcagactcggtgctcagtttcgactggagtcagccctccgtcacg
ctgcaggacgagccgctggagctccactgggaggatgaagaggaagatgatgaggaggag
tcggggctggccatgaagagcatccacccagacagagagcacagcctcacaccagaacaa
ggtgcagcggcgtccccctcgtccccgtgtgcagacagcagcagcagcagtggtgttgtt
ctcccgctgagctccgacatgctggcagcacagctgaagttcagctcctgcctgaagatg
ctgacggcggagctgcggacgctctccacgggctgcgagctggacggagggaagctgcgg
caccagctgagtgtgtggctggagcgtgaggtggcggcgctgcagaagagctgcgggtac
aaccctctgctggagccgcagccgcagcaccggcgcagacactggctgcagaagaaccag
ccgctcctgcgcatcttcctcagctactgcagcctgcacggctcacacggaggaggactg
gcttctgtacgcatggagctcatactgctgctgcaggagtcacagcaggatggcggtctg
caggtgtcagtccccgctccgcagcatctctccgttcctcttttcctggcctggaccgcc
agctctaaaacagtggtggccaatcccataatgcacctcaccaacctgacccacgacgtc
ctgcacaccatcacggcgctggacacccctccacacccggacctcatcaacaatgagatc
tacgtgatgcacacactggcggcctcactctccgcctgcatctaccagtgtctctgtgac
ggacacaactacagccatgtgaacccattcacgggcagctcgtaccagagtgtcctgctt
acccatcagccctcagtgcggagcggcagtgtggaggactcagtgctgcccgacaccatt
ccctcacagtggcctggtgtgagtgtcctgatgcgtctgctcagtgcgtctggagaggag
aatcagccgggtgtgtctgtgctgctgtgtgagatcctcactgcagtcttcctcagtctg
ttcgttcacggtttggccacacactccacacaccagctctaccgcaccgttgcgcacccg
ctcaacagcagactctgggtgtctgtgttcggcggcggcgctcgcaatcctgcaccccaa
aaaccaggatcgccatcagtggaggatgcagagcgtagacagcggcgtttccgtctgcct
tcatcgcgcagtaactccagagagactcctgacagcccgctcagccccagaccctccgcg
acggagccggaaacatccgtgattaaagagagattcgttcccccggagctcagcatctgg
gattacttcatcgcaaagccgttcgtgcctccgtccggcagtgtagtggagtatgactct
gatgacagccagggcagcgaggaggaggaggatgaagaggaagaggaaggagatgcactt
gattcaaactctccaatgactgaacattccaacaacaactcttacagctggtgtttgatg
cggttggcgatggtgcagatgatccagatcaacctcaaggccttctacccaatggcagga
cacgatctcttagacctgccagtgtgttctccgctctgtcatgccgctctgaagactctc
cagcgatgggagcagctgctgctgaagcggatggaggtttttgggggtcctccatcagag
ctgatctccacacagatgctggagcagagtgtgtccccggggcccgcactcctgcggcac
aaggccctgattgagcccgcaaacacaccctttaggtcccgccggcgctccgctctgccc
gtcagacggctgtggcagtacctggtgaagcaggaggagattcaggagaccttcatcaga
aacatcttcactaagaaacgagatcagaatgaggagactgacagtgtgaaagtgccgctg
gagtccacacacacacagattgaggctgatctgggttatcctggaggaaaagcacggatc
atccacaaggagtcggacatcatcaccgccttcgccatcaataaggctaatcgtaactgt
ctggtgatcgcctccacacacgacatacaggagctggacgtgtcctccatactcgccacg
cagatcctgacctggatagatgacgaggcggaggcagaggtcaaagggactgatgatttc
ctggtggttcacgctcgtgacgacttcaacactctgcacggcaccacgccgtacacacac
agcagtcccgggacccccatcaacatgccctggctgggcggcctgcagacgggcagagga
gccgctgtgctcatcaagcgcaacatcaacaacgtgaggaggatgacgtcacaccccaca
ctgccctactatctgacgggtgcgcaggatggcagcgtgcgcatgtttgagtggggtcac
tctcagcagatcacctgctacaggagtcccgggaactcccgcgtcacccgcatacgcttc
aactatcagggcaacaagtttgggattgtggatggagatggagcgctcagtctctggcag
accagcacctcaggaaacgcacccaaaccctatctgacgcttcagtgtcataataagacg
gccaatgactttgtgtttgtgggctcatcatctctcatcgccaccgcaggcctgtccact
gacaacaggaacgtgtgtttgtgggacacgctggtcactccagcctacagcctggtccat
ggcttcgtgtgtcatgactcgggctccacggctctggctctggcctgtaagcagcagctg
ttgttgagcgggggccggcggggcttcatcactctgctggatctcagtgtgaagctgcag
cggcagagtttccaggcgcacgattctccagtcaaagctctggcggtggactccagcgag
agctgcttcatcagtgggtcagcagagggcaacatcaaggtgtggagcatgaacacacag
agtctcctgcacagcttcatcaatgaacactcgcgtcagtcgctcttccggaacctgggc
acgggcgtgatgcagatcgaagcggctccagccaatcagctgttctcttgcggcgccgac
gggaccatgaagatgcgtgtgcttccagacgctctgagcggcagcggcggcaggaacgac
gtcaggttcatcatgtag
DBGET
integrated database retrieval system
