Danio rerio (zebrafish): 100333959
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Entry
100333959 CDS
T01004
Symbol
si:ch211-233g6.2
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03250
Viral life cycle - HIV-1
dre04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100333959 (si:ch211-233g6.2)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100333959 (si:ch211-233g6.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
100333959 (si:ch211-233g6.2)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100333959 (si:ch211-233g6.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
PDEase_I
AlkZ-like
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
100333959
NCBI-ProteinID:
XP_009294109
ZFIN:
ZDB-GENE-121214-114
Ensembl:
ENSDARG00000104626
UniProt:
A0A0R4II71
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All DBs
Position
1:complement(58491720..58505641)
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AA seq
538 aa
AA seq
DB search
MPQAEQSRKHLFEHRKSLQDLKKSYDASEEPDKQQLWEMITDELQDILKKYTLDFSKEQM
KIFNDPIHGHIALHPLLVKITDTPQFQRLRHLKQLGGTYLVYPGASHNRFEHSIGVAYLA
GRLVKSLHDNQPELKITKQDFLCVQIAGLCHDLGHGPLSHVFDVLVIPEVKKIKKLKGLP
DDIPESWKHEQMSVLMFDSIVKSLNEEVLREHGLTDNDVIFIKELIEGAKASDNEWPYQG
RNVEKSFLYEIVANKQNGIDVDKWDYFARDCHHLGIRNSFDHLRLLKFARVCVVNGRKHI
CFRDKEADNVYDMFRTRYTLHRQAYQHKIANIIEDMFAEALLLADRDLHEKKPADMLKIS
EAIKSVEDYSKLTDEIFEQILSSTSPNLKESKDILDKIMRRKLPKFIREVRLTVKNMSKE
ELKNSWKAAVKTYKPTDPTVTLTAEELPVYVVDLDHGMKDKNPIERVYFYSKRKPNEAST
IEDYQLSSFLPKKFNEELVRVYYRGSGPVKEEEKKKMEEAEKCFQTWCRSSLNLQAAQ
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgccccaagcagaacaaagcagaaaacatctctttgagcacaggaaaagtcttcaggac
ctgaaaaagtcttatgatgcaagtgaagagccagataaacagcagttatgggaaatgatc
acggatgaactgcaagacatcctgaagaaatacaccttagacttctcaaaagaacaaatg
aagatcttcaatgaccctattcatggccacattgctctgcaccccctgctggtgaaaatc
acagacactcctcagtttcagagactcagacacctcaaacagctcggaggaacatatctg
gtgtatcccggagcttcacacaaccgattcgagcactccattggtgtggcgtatttagcc
ggacgcctggtcaagagtcttcatgacaatcagccggagctcaaaatcaccaaacaggat
tttctgtgtgttcagatcgctggtctgtgccatgatttgggtcatggcccactttcacat
gtatttgatgtcctggttattcctgaagtcaaaaaaataaagaaattaaaaggtttgcct
gatgatatccctgaaagctggaagcatgagcagatgtcagtgctgatgtttgacagcatt
gtgaagagtctaaatgaggaggtgttgagggaacatggactcactgataacgacgtcatc
ttcattaaagagttaatcgaaggggcaaaagcctcagataatgagtggccgtaccagggc
agaaatgtcgagaaatccttcctctacgagattgtggcaaataaacaaaacggcattgat
gtggacaaatgggactattttgcacgagactgtcatcaccttggcattcgaaacagcttc
gaccatctccgactgctgaaatttgctcgagtttgtgtagtgaatggaagaaagcacatc
tgcttcagagacaaggaggctgataatgtctatgacatgtttcgcactcgatacacactc
catcgccaggcctatcaacacaagattgcaaatatcattgaagacatgtttgctgaagca
cttctacttgctgatcgtgaccttcatgaaaaaaaacctgcagatatgctgaaaatctct
gaagccataaagtcagtggaggattacagcaaacttacagatgagatctttgagcagatc
ttgtcctccacctctcctaatctaaaggaatccaaagacatcctggacaagatcatgaga
agaaaactgccaaagtttatcagagaagttcgtctgactgtgaaaaacatgtcaaaggaa
gagcttaaaaatagctggaaggcagcagtaaagacatacaaaccaacagacccaactgtt
accctgacggctgaagagctgccggtttatgtggttgatctggatcatggcatgaaggac
aaaaacccaattgaacgtgtttatttctacagcaagagaaaacccaatgaagcttcaacc
attgaggattatcagctgtccagtttcctgccaaagaagtttaatgaagagctggtcaga
gtttattacagaggatctggtcctgtcaaagaggaggagaagaagaagatggaggaggcc
gagaagtgcttccagacctggtgtagatcaagtctaaacctccaggcagcgcagtaa
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