Danio rerio (zebrafish): 100333974
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Entry
100333974 CDS
T01004
Symbol
tmc4
Name
(RefSeq) voltage-gated chloride channel TMC4
KO
K21988
transmembrane channel-like protein
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
100333974 (tmc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dre02000
]
100333974 (tmc4)
03037 Cilium and associated proteins [BR:
dre03037
]
100333974 (tmc4)
Transporters [BR:
dre02000
]
Other transporters
Pores ion channels [TC:
1
]
100333974 (tmc4)
Cilium and associated proteins [BR:
dre03037
]
Other cilia and associated proteins
Stereociliary proteins
100333974 (tmc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
100333974
NCBI-ProteinID:
XP_002664983
ZFIN:
ZDB-GENE-030131-7489
Ensembl:
ENSDARG00000031757
UniProt:
A0ACD6B5K0
E7F4Y3
LinkDB
All DBs
Position
16:35224376..35244504
Genome browser
AA seq
732 aa
AA seq
DB search
MELREFNDVVHPPPDYPSPDVSQHSLRLRTVAAPAPAQQSSGVQFDWASPPPEDAEDSSE
TRNLRELPLHMSLKRAVRQVQQMRVPVVSSSWNIKHSQTFRRFCEVAKNILSYFVLWKRG
IQRIGGHFGGGVQSYFLFLRFLVILNFLSSLLIAAFVLIPSIVFRSLNFNSTSNITIVNT
TGLETCMQYDPKPDALMVFFNYFLDLVSGTGFMEYSYLFYGYYNNTMIESDGFSYNIPLA
YLLTAAFYFLFCFFCIIIRMGGTARVVVETGAGAAGGYCMLVFTGWDHGLQGDRAVKLKQ
NNVRYRLQVDLEEERLKKKAASLTLGQTVSLYALRIFLNLIVLTLIVATFFGIAKATQFS
QSMKTTGFTGLLLQYLPSMVITASNFVVPLLCDKIALLEKYSPSTTVILALLRAVFLRLV
SLGVLLYTLWEQITCKGEIGSDDCKLCGYYYNQYKCWETRVGQEMYKLTLFDFLITVATL
ILVEFPRRIVVDHCSCKLSQLVGRQEFLVAPNVLALVYSQTVVWTGALFCPLLPFINTLK
FVIFYYCKKITLFQNCQPATRNFRSTTSNFFFLLVLLFGWMLASVVLLYSVAKIHPSYGC
GPFRLDPTMWDAVPQAVNMLSTTSRAFLFYIGSQKCSIPLFIFSCILLCYVSALTSVHGK
SVALLKSQCALEQRDKQFLIRQIEELNATMQKAEHEPKLLNTENEPFQHTAATQWNQHNN
YAFDPDEDPRPY
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggagctaagagaattcaacgatgtagtccatccacctccagactaccctagtcccgat
gtctcccagcattccctgaggttacggacagttgcggctccggctcctgctcagcagagc
agcggggttcagtttgactgggcttctcctcctcctgaagatgctgaagactccagtgaa
acacgtaaccttcgcgagctgccgctgcacatgagtctgaagagagcagtaaggcaggtg
cagcagatgagagttccagttgtgtccagctcttggaatattaaacattcacagacattt
cggcgtttctgtgaggtggccaaaaatattctcagctattttgttttgtggaagaggggg
atccaaagaataggaggtcactttggtggaggagtccagtcctactttctattcctgaga
tttctggtgattctcaactttctgtcctctttgttaatcgcagcgtttgtgctcattccc
agcattgtgtttcgctccttgaacttcaactccacctccaacatcactatagtcaacaca
acaggtttagagacctgcatgcagtatgatccaaaacctgatgctcttatggtgttcttc
aactactttctggacctggtttcaggcacgggttttatggaatattcataccttttttat
ggctattataataatacaatgattgaaagcgatggcttctcttacaacatccctctggcc
tacctgttgactgcagctttctacttcctcttctgcttcttttgtataattattagaatg
ggtggtacggctcgtgttgttgtagagacgggtgcaggagcagccgggggttactgtatg
ctggtgtttacaggatgggatcacggtcttcaaggagaccgcgctgtaaagcttaaacaa
aacaacgttcgctacaggttacaggtggatttagaagaggagaggcttaaaaagaaggct
gcctcgctgactttgggccaaacagtctctctctatgctcttcgaattttccttaatcta
atagtcttaacactcatcgttgcaaccttctttggcattgctaaggcaacacagttcagc
cagtctatgaaaacaacaggatttacggggctactgctgcagtacttaccctccatggtc
ataacagcaagcaattttgtggtgcctttactctgtgacaagattgcattactggaaaag
tattcccccagtaccacggtcatcctagccttgctcagggcagtgttcttgcgtttggtc
agtttgggtgttttgctgtacacactatgggagcagataacctgtaaaggagagattggc
agtgatgactgtaaactctgcggttattattataaccaatacaagtgctgggagacgcga
gttggccaggaaatgtataaattaactctatttgacttcctgattaccgttgctacactg
attctggtagagtttccacgcaggatcgtggtggatcattgctcatgcaaactgagccag
ctggtgggacggcaagagtttctggttgccccaaatgttcttgctctcgtttacagtcaa
acggtggtttggactggagctcttttctgtccattgctgccattcatcaacaccctcaaa
ttcgtcatcttttattactgcaaaaagattactctcttccaaaactgtcaaccggcaaca
agaaacttcagatccaccacctccaacttcttctttctgttggttctgctctttggatgg
atgttggccagtgtggttctgctttacagtgttgctaagatccatccatcatatggctgc
ggccctttccgtcttgacccaactatgtgggatgctgtaccacaagctgttaacatgcta
agcaccactagtagagctttcctgttttacatcggctcccagaaatgctctattccactc
ttcatcttctcttgcatccttctgtgctatgtgagcgcattaacgtcagtccatgggaaa
agtgtagcgctgctgaaatctcagtgtgcactggaacagcgtgataagcaattcctgatc
agacaaattgaggagctgaatgccacaatgcagaaagcagaacatgaacccaagctgcta
aatacagagaacgagccttttcaacacacagcagctacacagtggaatcaacacaacaat
tacgcttttgaccccgatgaagatccaaggccgtattaa
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