Danio rerio (zebrafish): 100334190
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Entry
100334190 CDS
T01004
Symbol
ttf1.2
Name
(RefSeq) transcription termination factor 1.2
KO
K15225
transcription termination factor 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
100334190 (ttf1.2)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
100334190 (ttf1.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
100334190
NCBI-ProteinID:
NP_001353684
ZFIN:
ZDB-GENE-100921-87
Ensembl:
ENSDARG00000091967
ENSDARG00000093999
LinkDB
All DBs
Position
5:63359574..63387137
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AA seq
567 aa
AA seq
DB search
MDEMQSDSPNNVDGEKMKKKKISKTTEQHELTESPQEQTEKRRKKKKKKRRDSTTECDDD
LQTDTGKKKKRRKLDNEGETSVMDDGVSDQHEAQTQELPGSSEEKTSRRLKARVSATQTS
HAEMTEEEQTDTETEHEEEPNTSDDEESGPPDVVIGTGWRKSRKIPVDLKLLAELKEFCP
NTAIESQSDTEINKMIKYDLPRFREFKKQGIAMRHGRFSKAENEKLRQNVSDLLALTQLK
DAVMLFHPKRFLNEEMKLAELKRMYGFYQKIAEGIPRPCHDVYTRGKKMFDHRHYKGNFT
EEEDKRLLKYYNLYGPNWKKISEKTGRSSFSLRKRFPQISSVKRKGPWTPEEVQRLLRAV
REHVLSVLKSANPNKKKPKRVRREILYENLPWTTIADKVETRCYRQCREKWMSILFTRMS
SGTTFRGKAGLLAKIRLIKAMYEMQVEDVADIDWESLTAAFGNVPPAHVQKMWRKIKNYY
LPDWNSRSFKDNVSHLHKNILPCLVSSCKGFDVNAVKVEQKELFRLSKIFKDIEEDGQDI
EEDGQDIEEDGRDGDEETGEQENNSFN
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggatgagatgcagtcagattcaccaaacaacgttgatggggaaaagatgaagaagaaa
aagataagtaaaactactgagcagcatgaactcactgagagtccacaggaacagactgag
aaacgccgtaaaaagaagaagaagaagaggagagacagtacaactgaatgtgatgatgat
ctgcaaacagacacaggcaaaaagaagaaaaggagaaagctggataatgaaggcgagact
tcagtgatggatgatggagtctcagatcagcatgaagcacaaacacaagagctcccgggt
tcaagtgaagagaagacttctaggagattgaaagcgagagtaagtgcaacacagacaagc
catgcagagatgacagaagaagaacagactgacaccgagacagagcatgaggaagagcca
aacacgagtgatgatgaggaaagcggcccgcctgatgtggtgatcggcactggatggcgc
aaatctcgcaagattccagtagatttgaagctcctggctgaactgaaagagttttgcccg
aatacggcgatagaatctcaaagcgatactgagataaataaaatgatcaagtatgacctg
ccaagattcagagaattcaagaaacaaggcatcgcaatgagacatggaagattttctaaa
gcagaaaatgagaagttaagacagaacgtaagcgaccttctggctctcacacaactgaaa
gatgcggtcatgctctttcatcccaaacggttcctaaatgaggaaatgaaattggcagag
ttgaaaaggatgtacgggttttatcaaaagattgcggaaggaattcccagaccatgtcat
gatgtttacactcgtggaaagaagatgtttgatcacagacattataagggaaattttact
gaagaagaagacaaaagattgctgaaatactataatctgtatggcccgaattggaaaaaa
atttctgaaaagacaggtcgaagttctttctcccttaggaaacgatttccacaaattagt
tcggttaaaagaaagggaccgtggactcctgaggaggtgcagaggcttttaagggctgtg
cgtgagcatgttttgtctgtcctgaaatctgcaaaccctaataaaaagaaaccaaaaaga
gtcagaagagaaatactgtacgaaaatttgccctggaccacaattgctgataaagttgaa
actcgttgttataggcaatgcagagaaaaatggatgtccatactctttacccgaatgtcc
tcagggactacatttagaggaaaagcaggtctgctggccaaaattagactcattaaagcg
atgtatgaaatgcaagtggaggatgttgcagatattgactgggaaagtctcacagctgct
ttcggaaatgtccctccagcacatgttcaaaaaatgtggcgcaaaattaaaaactactat
ctgccagattggaacagcaggagttttaaagacaatgtctcacatctccataagaacatt
ttgccgtgcctggtgagtagttgcaaaggctttgatgtcaatgcggtcaaggtagagcag
aaggaactattccggctatcaaaaatttttaaggacattgaggaagatggccaggacatt
gaggaagatggccaggacattgaagaagatggccgtgatggagatgaagagactggcgag
caggagaacaacagctttaattaa
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