Danio rerio (zebrafish): 100535018
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Entry
100535018 CDS
T01004
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80
KO
K20775
BRCA1-A complex subunit RAP80
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100535018 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
100535018 (uimc1)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
100535018 (uimc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
UIM_2
Motif
Other DBs
NCBI-GeneID:
100535018
NCBI-ProteinID:
XP_003200939
ZFIN:
ZDB-GENE-101006-1
UniProt:
A0A8M1RMY1
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Position
21:complement(40712645..40752848)
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AA seq
914 aa
AA seq
DB search
MPRRKRTGDEGGRRAKVSRVELNEEPLVISDSDHEEEENANKRSSRSVRWKRRENESHLR
DMTEEEMLALAMRLSAQEANSAANREELEDSNIQKAIAESLNESVVKPSDGLENEAGSSS
DQPLENEAETFTNMRRKLCYPSQDQTHNEIERETSPLPEMPDLSQTTSSHISSMSPAHIS
RPSADTQDKTSDKQTTISNTPEFEIFKSLSESQLSPVLTRQSSSSRRPVVCVEKLSQELI
SASADSLNIHTQNSIVTPSRANGSQFPEQVDSPFPKCPVFTQNNFRRGIDSIEDKSFNGK
EDETQIPDEDTHLPTESSQGLSTDSDTCLSPSRKSQLSSPKFVPKIKEDATLTHRTPDQK
PVEDQTTPREKESVTESASKTQSWEGFTSHMVLLLPDDDDEDEGSEEILSPSPILHKEKI
IRPLKIEISPTQSHVSSSTINPSTQDTEMSRSVLEQDSKASRGAEFKPSYCKASRSSEEN
GERTVTYYWGVPFCPMGQNPDEYTSVIMCQMEVYEKSLKEAQRELLRKADWGKPVCPESP
ERSFGARRWKRHRATRLSEEEEENEVEAEKQSNTIIEEEEEEEARGESEVGTLNNADGGQ
SETYVVLSSPETKDEQVDKTPFLSQEEPETRAVDKHIRNSVSRDTSDETGTQCPAEQHVD
ETPNMEACEEDPTVCPETQMSESSTPELMMTSPAQAQSRADSEVMEVEDGGDAPAADEEI
IMMMEQDADPAEPAAPHSEQMECPMCSRLFPISKIEMHAAYCDGEADQQSQVVRRTRNRR
QLMEDTHQSEKSANLEKCSVCHDLFPLQEYIQHVPLCIERSSTANQENGLLSALERTEQR
STVSASDEPGPSDVPTKSNCGFSDIVVMGTSESVSEAMVSSPSSTFTPPSENTQCLTESA
RNSLRLSRKRKFKK
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccggaagcgcacaggggatgaaggcggaagaagagccaaagtcagccgagtg
gagctcaatgaggagcccctggtcatttctgattctgatcatgaagaggaagaaaatgcc
aataaacgctcctctcgttcagtgcggtggaagcgaagagagaatgagtctcatttacga
gacatgacagaagaggagatgctggctcttgccatgagactgagcgctcaagaagcaaac
tctgcagccaatagagaagagctggaagacagcaacattcagaaagccatcgcagagagt
ctgaatgagagcgttgtaaaaccatctgatggtctggagaatgaagctggtagctcttct
gatcaaccactagagaatgaagcagaaacctttacaaacatgagacgaaaactgtgctac
cccagccaagatcagacacacaatgagatagaaagggaaactagtccacttccagaaatg
ccagatctatcacagacgacctcctcacatatttcatccatgagtccagctcacatatcc
aggccttcagctgacactcaggacaaaacttcagataaacagacaaccatcagcaacact
ccagagtttgagatcttcaaatctctctcagagtcccagttgtctcctgtcttgaccaga
caaagctcttccagtcgccggcctgtagtctgtgtggagaaactgagtcaggagctcatc
tcagcgagcgctgattcattaaacatccacacgcagaacagcattgtcactccctcccgt
gccaatggatctcagttccccgagcaggtagattcacccttccccaaatgcccggtcttc
actcaaaataactttagacgaggaatcgattcaatagaggacaaaagtttcaatgggaaa
gaagatgaaactcaaataccagacgaagatacgcatttaccaacagagtcaagccaaggt
ttgagcacagattcagatacgtgcctttcgccatcgaggaaatcccagctgtcaagtcca
aaatttgtgcctaaaatcaaggaagatgccactttaacacatagaacccctgaccaaaag
ccagtggaggatcagaccactccaagagagaaagaatctgtcactgagtcggcttcaaag
acacagtcttgggagggatttactagtcacatggtcttgcttttaccagatgatgatgat
gaagatgaaggcagtgaagagatcctctcaccgagtcccatccttcacaaagagaagata
atccgacccctcaagattgagatttctccaacgcagtcccacgtgtcttcatccaccatc
aatccttccacacaagacacggagatgtcccggtctgtcctggagcaggactcaaaagca
tccagaggcgctgaattcaaaccctcatactgtaaagcttcacgttcttcagaggaaaat
ggagaacgcactgtcacttactactggggagtgcctttctgccccatgggccaaaaccca
gacgagtacacaagtgtgatcatgtgtcagatggaggtgtatgagaagagcctgaaggag
gcccagcgagagctgctgcgcaaagcagactggggaaaaccggtttgtcctgaatcacca
gaaaggtcatttggtgcgaggagatggaaacgacacagagctactcgactgtctgaggaa
gaggaggagaatgaagtagaggctgagaaacaaagtaacacaataatagaagaagaagag
gaggaggaagccaggggagagtctgaggtcgggacacttaataatgctgacggtggacag
agtgaaacctatgtcgttttatcttctccagagactaaagatgagcaagtggacaaaacc
cctttcttgagccaagaagagcctgaaactagagctgtggataaacatatcaggaacagt
gtttcacgggacacttcagatgaaactggaacacagtgtccagctgagcagcatgtagac
gagactcccaatatggaggcttgtgaagaggatccgacagtttgtccagagacacagatg
agtgaaagcagcacacctgagctgatgatgaccagtcctgcacaggcccagtctcgcgct
gacagcgaggtgatggaggtggaggatggaggagacgctccggccgcagatgaggagata
atcatgatgatggagcaggacgctgatcccgcagagcccgctgctcctcacagtgagcag
atggagtgtcccatgtgctccagactcttccccatcagcaagattgagatgcacgcagct
tactgtgatggagaagcggaccagcagtcacaagttgtccggcggacgaggaacagaaga
cagttgatggaggacactcatcaatctgagaaatcagcaaatcttgagaagtgctccgtg
tgtcatgatttgtttccactacaggagtatatacaacatgtccctttgtgcatagagaga
agctcaacagctaatcaggaaaacggcctgctttctgctctggagcggacagaacagaga
agcactgtttctgccagtgatgagcctggcccgtcggatgttcctaccaagagcaactgc
ggcttttctgatattgtggtgatggggacgtctgaaagtgtcagtgaagcaatggtttct
tctcccagcagcaccttcactcctccttcagagaatacacaatgccttactgagtctgcc
aggaacagcctaagactctcaagaaagaggaaattcaaaaagtag
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