Danio rerio (zebrafish): 100535608
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Entry
100535608 CDS
T01004
Symbol
sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100535608 (sh3tc1)
Membrane trafficking [BR:
dre04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
100535608 (sh3tc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
TPR_8
TPR_7
TPR_NPHP3
SH3_1
TPR_10
SH3_9
ARM_TT21_4th
SH3_2
Motif
Other DBs
NCBI-GeneID:
100535608
NCBI-ProteinID:
XP_005166551
Ensembl:
ENSDARG00000077330
UniProt:
F1QHY2
LinkDB
All DBs
Position
7:complement(61843723..61901750)
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AA seq
1322 aa
AA seq
DB search
MSAAARRNSSKTGNGVEPDPDRVRTLRRELSNEYTRNELDNIMESSSRDYRISRGSFKGT
PGASDDNVPTVLAMQLTMVEGPDRLPADENTQEVLCRKLCVLEADLSGVVTLISELSAHF
VSIYSEERTIFITFKTIDDIWRFSTYYRMGFLGQCMENLLMDQEFWLTSLDHHSGIEISI
KEETLNLMYKGFLMQEGSFFGCCTANQMFDSSTSGKDLYLEKGDIALFEPPFLGSGWTVL
SLAEGSRGTKAKPALEPVTPFHEWFLKSCPETVLVGGGKDTIDLPFQIAVGVCETIEDYD
ADGPDELSFQTGERIIIQGLLVACFEWFMGQSEKTGDTGLVKTRLVKATGSFCESSDMFL
KDEDRQIVTLDHEQIKEETLSLLKKTCQCDVGTNYKLDVAKEISGSVQSKSHQTEVSNLK
QKVSHVLSEAQETQRNEVSALIINHQKEKQRNDTEVSQDTPRFSVCSDKEGSSPDEHHAL
LSFLSSREHQPEFTLLYRAYPEFLMTHFEGHSDEEDIVTYLGIARELARKKRVSWAQSRI
CFLLGQLCAGRSKFSQARVYYEEALNVPRDSFSDMLLLSALYSNLALIYLTQKNHEKFFA
LSERFSALLMAVPDCLFGCEDPEVLKYVLKKAVLAKSQLAEARACFLLAKLHLKIKDAVS
VVPFIERLLILADELPEVCDEAMCHVSLVLARLYSEQGLPRLAESCARRASLQVGVTVSH
CLCGVSLLLENAPELHGVSIPTQVAPFLTRAAALAPLHNDPTLVHIHALCLSWLFHRHNM
PERAVRYMCAILEHSSMSSIGKSDATTAFIWLAWLYICNQQPGTALEVLDAVLASLPEHC
TTHLEGVVYNMRAISYRHSADIRQAAESYQAAIEICEEFEDRHNWAVALANFGFMCLQVK
AKRLAEENLCQSMELFSGLEDEGHELSFILVLLQLGRHFISQGNSESGKIYYEWALLIAT
YIDNIESQLHTTRHLCELYEDVCPDEAQCIIYNEHQLNLLQRIGDKSSEAEILEKISQLY
LNLATEKANRAALDYTKRSLAIFIDLGKKRKEAHAWLRAGKIYHILQQTELVDLYVQVAQ
DMALNTGDTLFTLEMLEAAGDVFFNSSQDRDKAICFYRDRALPIAVKTSSVGSQLRLCNK
LSELLLQLGQSSEALEFAQTALDISVSLADRLNERVAFHRLATLYHCLGQFEMAEHHFLK
ALSLCPSPLQYDEEALYYVRVYQTLGDIIFYDVKDPFDAAGYYHLALAAAMDLGNKRSQL
QLCTRLATIYHNFLMDRELSLFFYQRARVFANDLHIRRINLAPDYSFRSTSQYKHTITGA
AR
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgctgctcgcagaaactcgtccaaaacaggcaacggcgtggagcccgatcca
gatagggttcggaccctacggagagaactgtcgaatgagtacacgcgcaatgaactggat
aatatcatggagtcttcatctagagattataggatctccagaggaagttttaaaggtact
ccaggagcctcggatgataatgtacctacagtgctggctatgcagctgactatggtggag
gggccggatcgacttcctgccgatgagaacacacaggaagtgctctgcaggaagctctgt
gtgctggaagctgacctctcaggggttgtcaccttgatatctgaactgtctgctcatttt
gtatccatttacagtgaggaaaggactatatttatcacttttaaaaccattgatgatata
tggaggttcagcacctactacagaatgggcttcttgggtcagtgtatggaaaatctcctc
atggaccaggagttttggttaacctcccttgaccaccattcaggaattgagatctcaatt
aaagaggagacactaaatttaatgtacaaaggttttctaatgcaagaagggtctttcttt
ggatgctgcacagccaatcagatgtttgacagctcaacatcaggaaaggacctttatcta
gagaagggggacatcgctctgtttgagcctccctttttagggtcaggctggactgtcctg
tcactagcagaggggtctagaggaaccaaagcaaagccagctctggagccagtcaccccc
tttcatgagtggtttttaaagtcctgcccagagactgtgttagtgggtggaggaaaggac
actattgacctcccattccagattgcggtaggagtgtgtgagaccatagaggactatgac
gctgatgggcctgatgaactgagcttccagactggtgaacgcatcatcatccagggcctg
ctggtggcctgttttgaatggtttatggggcaatcagagaaaactggggatactggactt
gtcaaaacaagactagtcaaagccaccggttctttttgtgaatcatctgacatgttcttg
aaggatgaggacagacaaattgttactttggatcatgagcaaattaaagaggagactctt
tctttattgaagaaaacatgccagtgtgatgttggcacaaactacaaacttgatgtggca
aaagaaatttcaggttcagttcaaagcaagagtcatcaaacagaagtcagcaatttaaaa
cagaaagtcagccacgtattgagtgaggcacaagagactcaaagaaatgaggtttcagcg
ctgatcatcaatcaccagaaggagaaacaaagaaatgacacagaagtgtcccaggacacc
cctcgtttttctgtctgctcagataaggaaggcagcagtccagatgaacatcacgctctc
ctctccttcttgagcagtcgtgagcaccagccagagttcaccctcttatacagagcttac
ccagaattcctcatgacacattttgagggtcactctgatgaagaggatatagtaacgtat
ttaggcatagctcgagaactggcacggaagaagcgtgtctcatgggcacagagccgtatc
tgttttcttctcggacagctttgtgcagggagatcaaagttctctcaagctcgtgtttat
tatgaagaagccttaaatgtacctcgggatagtttctcagacatgcttctgctctctgcc
ctttattccaacctggcgctcatttacttgacacagaagaaccacgagaagttcttcgct
ttgtcagaacgcttttctgctttgttaatggctgtccctgattgtttgtttggctgtgag
gatcctgaggtgttgaagtatgtgctgaaaaaagccgtcctggccaaaagtcagctcgct
gaggcccgagcctgttttcttctggcaaagctccacctgaagattaaagatgctgtgagt
gttgtcccgttcattgaaaggcttttaatccttgccgatgagcttcctgaagtatgtgat
gaggctatgtgccatgtttccctggtgttagcgagactctacagtgagcagggtttacct
cgcctggctgaaagctgtgcacgccgggcatcacttcaggtaggagtcaccgtgtcccac
tgtctctgtggtgtttctttattactggaaaatgctccagagctacatggagtgtccatc
ccaacacaagtggctccattcctgacccgtgctgctgctttagcccccctgcacaatgat
cccacactggttcacatccacgctctgtgtttgtcctggctcttccacagacacaacatg
cctgaaagagctgttcgctacatgtgcgccatcctggaacactctagcatgtccagcatt
ggcaaatcagacgccaccactgcgttcatctggctggcatggctgtacatctgtaaccag
cagcctggcacagctctagaagtgctggatgctgtgctggcatcactgcccgaacactgc
actactcatctggaaggtgtggtttacaacatgcgggctatttcatacagacattcagca
gatatccgtcaggccgctgagagctatcaagccgcgattgagatttgtgaggagtttgag
gatagacataactgggctgtggcgctggccaattttggattcatgtgcttgcaagtcaaa
gctaaaaggctggcagaggagaacctgtgtcagtcaatggagcttttctctgggcttgag
gacgaagggcatgaactcagctttattctggtgcttctccagttggggagacactttatt
tctcagggaaacagcgagagtgggaagatctactatgaatgggccctgttgatcgccact
tatatcgataacattgagagccaactgcacaccactcgtcacctgtgtgagctttatgaa
gatgtgtgtccagatgaagcccagtgcatcatctataatgagcaccagctcaacctcctc
cagcggattggagacaaaagttcagaagcagagatccttgagaagatcagccagctctac
ctcaacctggctactgagaaagctaacagagctgctttagattacaccaaacgaagtctg
gccatcttcattgacttgggcaagaaacgcaaagaggctcatgcctggttacgagcgggg
aagatttaccacatcctccaacagacagaactggtggacctctatgttcaggtagctcag
gacatggctttgaacacgggagacacacttttcacactggagatgctggaggcagctgga
gacgtgttcttcaacagttcacaggaccgagacaaagccatctgcttttacagggaccga
gctcttccaattgcagtgaagacgagcagtgttggctctcagctccggctgtgtaataaa
ctctcagagcttctgctgcagctgggacagagttcagaggcccttgagtttgctcagact
gcattagacatcagcgtgagtctcgctgaccgtttgaatgagagagtggctttccatcga
cttgccacactttaccattgtctgggtcagtttgaaatggcggagcaccactttctgaaa
gccctgtctctgtgcccatctcccctgcagtatgacgaggaagccctgtattatgtcagg
gtttaccagacccttggagacatcatcttttatgacgtaaaggacccttttgatgctgct
ggctattatcacctggctttggctgctgcgatggatctgggcaataagaggtctcagctg
cagctctgcacccgactggccaccatctatcacaacttcctcatggaccgtgagctctca
ctcttcttctaccagcgagcacgagttttcgctaatgatctacacattcgcagaatcaac
ctggctccagactacagcttcaggtccacatcccagtacaaacacacgataactggggca
gcaagatag
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