Danio rerio (zebrafish): 100536545 Help Entry 100536545         CDS       T01004                                  Symbol synpo Name (RefSeq) synaptopodin isoform X1   KO K21112   synaptopodin Organism dre  Danio rerio (zebrafish) Pathway dre04530   Tight junction Brite KEGG Orthology (KO) [BR:dre00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     100536545 (synpo) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Calsarcin Motif Other DBs NCBI-GeneID:  100536545 NCBI-ProteinID:  XP_017210011 Ensembl:  ENSDARG00000106873 UniProt:  A0A2R8QMT1 LinkDB All DBs Position 14:49604880..49666464 Genome browser AA seq 873 aa AA seqDB search MEYKHASTRRGDSWSGTSCTRENSSLETLRSDILEKDELRGLTSCRMERKTNLSRSASLS EKELKEARTKSQIIAAQLQANSSSKGVQLFNRRRQRVNAFTLVSVGGGGSEALENVINPS NECPQTWDKPQPTDNQHRELNNRNIKTALARSAGGISNNNNIMEEAGEFTHEDEESRHFL PVNEKDEELSEEHVKDEDTISTAMQRSSQDGVRYEEVQNGYSKQCNGKSTTTKQQTIVNR TARPFFSPTTVGSPKATSPEIPSSMTPQNFSSMHTRPVFSPPPPPPPSYPTPPLPSHPET HSPSPRASSFYIRPSVPRPTFVPEHLKSESRPVTPIKTGILDEGRVRRGTRKSMFTFQEK PTVAPSPELLSLVQGTDVKKKAKPQPDAAQEEELLALGAEASNFLAKNEEEDIHEEAVVP EWASSLKSSRTRARTEHKPEQALTNASGKGAQLFAKRQSRMEKFVHDSKDLRSPSPTMSL PPSWVYPSNMPGRVKAIVNSSNISAQISKTLQAQQATQKKTIPAKTPAPAPPPEVPLENG CTKIEMELSRHQPYQLSSSLFIFNPTKDPYSTLPRSPKPVSQSYSRQTSLPTSPSPYTSS SSYRSAHCFSPPLTPQTAGSISSPERVASPRSNVQAPRPVFSAKKAGIAPQIKQEILAPS PVPSPGSTTPTSSRTPNLSRRFTSPEVLSSGVWSPSGSLVSSSPIYKPTPIHKPVPKYEP TDTSSPGVYKPTISSSPVSPPWENRCQSPAVIPDTKANHRILAKNIINAAKRKNSPSPGR NNLPISPGTLPYEYKPISPFQPRMLGARSPTLTSPSPTRMMQSPVRLYNTRSLTDSDASL ESEDSPAPRSYNTCPRGWSAGLQVKRGGISEDL NT seq 2622 nt NT seq  +upstreamnt  +downstreamnt atggagtacaaacatgcgtctactagaagaggcgacagctggagcgggacgtcctgcaca cgagagaactcatccctggagacgctcagatctgacatcttggagaaagacgagctgaga ggattgacgtcttgcaggatggagaggaaaacaaacctcagccgcagtgccagtttgtct gaaaaggagctaaaggaggctcgaaccaagagtcagatcatcgccgctcagctccaagcc aactccagctcaaaaggcgtccagcttttcaaccgtcgcagacagagagtcaacgctttc acgctcgtgagcgttggaggaggcggatccgaggcgctcgagaatgtaattaatccatct aatgaatgtccacagacatgggacaaaccacagccaactgacaaccagcacagagagttg aataacaggaacatcaaaacagctctcgcccggtcagccggtggaatcagcaataataat aacatcatggaagaggccggggagtttactcacgaggatgaggaaagcagacactttcta ccggtcaacgagaaagatgaagagctctcagaagagcatgtgaaagatgaggatactatt tctacagccatgcaaagatctagccaagatggagttcgctatgaggaagtccagaatggt tacagcaaacagtgcaatggaaaatcaacaacaacaaaacagcagactatcgtaaacaga acagctcgaccgttcttctctccgacaacagtaggatctccaaaagctacaagtccagaa atcccatcctcaatgacaccacaaaacttctcaagcatgcacacaagaccagttttctct ccaccacctccacctccaccttcatatccaactcctcctcttccaagccatcctgaaact cattctccatcaccccgagcttcttccttctacatccggccttcagttccgaggcctacg tttgttcctgaacacttaaaaagcgagtcaagacccgtaacacccatcaaaacaggcatt ttggatgagggacgggtgcgcagaggaacccgcaaatcgatgttcacctttcaggagaag ccgacggtggctccgagtcctgagctgctttctttggttcagggaacggatgtgaagaag aaagcgaagccgcagccagacgcggcgcaggaggaggagctgctggcgctcggagccgaa gcctcaaactttctagcaaaaaacgaggaggaggatattcacgaagaagctgtggtgccg gagtgggcctccagtttgaagagctccaggacacgtgccaggacggaacacaagcccgag caggccctgaccaacgcttcaggaaaaggagctcaactttttgccaaacgccaatcgagg atggaaaaattcgtccatgacagcaaggatctcagatctccgtctcctacaatgtcttta cctccctcatgggtgtatccgtctaacatgcccgggcgagtgaaggccatagtgaactct tccaatataagtgcacagatttctaaaactctccaagctcaacaagccactcagaaaaag accatccctgccaaaacgccagctcctgcaccacctccagaggttcccttagagaacggc tgcactaaaatcgaaatggagctgtctagacatcagccttatcagctcagctcatcgctt tttatcttcaacccgacgaaagacccatacagcactcttcctagatctccaaaacccgtc agtcagtcatactccagacaaacctccctccctacaagcccatcaccgtacacttcatcc tcctcctatcgctcagctcattgtttttctcctcccctgacgcctcaaactgcaggatcc atcagttctcctgaacgcgtggcttcacctcggtctaatgttcaagctccacgtcctgta ttctccgctaaaaaagctggcatcgccccacagattaagcaggagatcctagcacccagt ccggttcccagtcctggctccaccacccccacctccagcaggacccccaacctcagccga cgcttcaccagcccagaggtgctctctagcggggtctggtcccccagcggctccctagtg tcctccagcccaatctacaaaccaacaccaatccataaacccgtcccgaaatatgagccc accgacacttcatctccaggagtctacaagccaacaatcagcagctctccagtgtctccg ccatgggaaaacagatgccagtcgcccgccgtcatcccggacaccaaagccaaccaccgc attttagccaaaaacatcatcaacgccgccaagcgtaaaaacagtccgtctcccggccgc aataatctccccatttcccccgggactttgccttacgaatataaaccaatcagtccattt cagccgcggatgcttggtgcacgctcgcccacactaaccagcccgtctccgacccggatg atgcagtcgccagtgcgtttgtacaacacgcgctcgctgaccgactctgacgcatcgctg gagtctgaggattcgccagcgcctcgcagctacaatacctgccctcgtggatggagcgca ggtctgcaggtcaaaagaggaggcatttctgaagacctgtag

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