Danio rerio (zebrafish): 100537263
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Entry
100537263 CDS
T01004
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
100537263
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100537263
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100537263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
100537263
NCBI-ProteinID:
XP_017210000
UniProt:
A0A8M6YXF5
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MGCNLCSLQKREEHYKLLYEIAQVNGRDLSRASHEEALEAFRSAKEPVVVQVLRRTPVPR
GQRSQLVDVCTQTEITFEHIMALAKLRPLTPPVPDICPFLLSDSGHSLHTLDQEYLEGSE
FLSSLPADAERTDDFEYEEVELCRVCRQDKLGLTLCYRTDDEDEFSIYVTEVEPNSIAGR
DGRIREGDRILQINGRDIQDRQEAVGVLSNEESRNIVLLVARPELQEEPWLEDEHSEFLE
ELKMEMLEEQRREEEEEEEKARVAEEESITASCSYSPEQILQTDPSEMSVLSQIQKRLSR
CLRPDQISPSETPEAERFQQLLELKCQIRNSGEYDLLYRRSVQCSGAENELRLLNQELRS
IQIQCQNIMQRHKTDSKLPEIQEHPERSDKDSSSAYNTAESSRSTPLATERSPEHRTLSR
RPESSIRSASPDHSNPSESPDEISSRSLHSRIPVHQYRSYMQMIQEQTALEFGMINMSVP
QEDNKMEWKVKVRSDGTRYITKRPVRDRLLRERALKIKEERSGGMTTDDDAMSEMKMGRY
WSKEERKQQLLRAKEQRRRREMMQRGRTDTHNTSIMEISQRRSTKRRNRRILDSWITIQE
LLSHGHTAAAEGAREHSAFLSVTTV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgtagccttcagaagagagaagagcattacaaactcctgtacgag
atcgcacaggtgaatgggcgggatctgtccagagcgagtcatgaggaagcgctcgaagcc
ttcagatctgctaaagagccagtggtggtgcaggtgctccggcggacccctgttccccgg
ggtcagaggtcacagctggtggacgtttgcacacagacggagatcaccttcgagcacatc
atggctctggccaagctgcggccgctgacgccaccggtgcccgacatctgcccattcctg
ctgtccgacagtggtcactctctgcacactctggatcaggaatatctggagggcagtgag
tttctctccagtctgccggcggatgcggagcgcaccgatgacttcgagtatgaggaggtg
gagctgtgcagagtgtgtcgtcaggataagctgggcctgacactgtgctacaggactgat
gatgaggacgagttctccatctacgtcactgaggtggagccgaacagcatcgcgggccga
gacggaagaatccgagaaggagaccgaatattacagataaatgggcgggacattcaggac
agacaggaagcagtgggcgttctctctaatgaagagagcaggaatattgtgctgctcgtc
gccaggccagaattacaggaggagccgtggctggaggacgagcacagtgagtttctggag
gagctgaagatggagatgctggaggagcagaggagagaagaagaagaggaggaggagaag
gcgagagtggctgaagaagagtccatcacagcctcctgctcctacagccctgagcagatc
ctccagacggacccatcagagatgagcgtcctctcccagatccagaagcgtctgtctcgg
tgtctgcgtccggatcagatcagcccatctgagactccagaagcggagcgtttccagcag
ctgctggagctcaagtgccagatccgaaacagcggcgagtacgacctgctgtaccgcaga
tccgtccagtgcagcggcgccgagaacgagctgcgcttgctgaaccaggagctgcgcagc
atccagatccagtgccagaacatcatgcagcgccacaagacggactccaaactcccagag
atccaggagcatcccgagcggtcggataaggacagctccagtgcgtataacacggcggag
agctcccgcagtacacccctcgccacagagagatctccagaacacagaacgctcagccgc
cgtcccgaatcatccatcaggagcgccagtccggatcacagcaacccgtcagagtctcca
gacgagatctccagcaggtccctgcactccaggatcccggtgcatcagtaccggagctac
atgcagatgatccaggagcagacggcgctggagttcgggatgatcaacatgagcgtcccg
caggaggacaataagatggagtggaaggtgaaggtgcggagcgacgggaccaggtacatc
accaagcgtccggtgcgggaccgtctgctgcgcgagcgagcgctgaagattaaagaggag
cgcagcggaggaatgaccaccgacgacgacgccatgagcgagatgaagatggggagatac
tggagcaaagaggagagaaagcagcagctcctgcgggcgaaggagcagcggcggaggaga
gaaatgatgcagcgcggccggacggacacccacaacacctccatcatggagatcagccag
cgcaggagcaccaagaggaggaacagaaggatcctggacagctggatcaccattcaggag
ctgctgagccacggacacacagcagcagcagagggcgccagagagcacagcgccttcctc
tccgtcaccaccgtatga
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integrated database retrieval system
