Danio rerio (zebrafish): 100537961
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Entry
100537961 CDS
T01004
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100537961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
100537961
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100537961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
DUF3124
AAA_lid_5
Motif
Other DBs
NCBI-GeneID:
100537961
NCBI-ProteinID:
XP_017213324
ZFIN:
ZDB-GENE-070912-267
Ensembl:
ENSDARG00000074225
UniProt:
B0S5T4
LinkDB
All DBs
Position
9:36124655..36175080
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AA seq
1174 aa
AA seq
DB search
MIAEPTLLSRSVQKENSVVDVSSCGSVHHTSSERNENRQKTVRGKRKARECSENAKRKHS
KSSNGSLGRAENEQLKNGDVEAVTLFEVVSMGRNAMQAVVDDWIDAYTVDRDTALLDLIS
FFIQCSGCKGMVTAEMFQSKQGTDVMSKMVEDLDEDAGFQYKKFLAFPWILTVTWPLDMD
SGEYPLIMSGLYWKRFRSHFCEFISVLVAQCQSCVIFDGYLLNTLISLLTELSDSRVRAF
RHTCTLAAVKLLSALVNVALNLSVSVDNSQRLYEVELAKMASKRASPRLDRIQRKISELQ
DRKLEIENMMDAIFKGVFLKRYRDVIPEIRSICMEELTVWMKLYSSVFLNDSYLKYVGWM
MHDKQPDVRLKCVLGLQGLYQDQNSSKMDLFTVRFKERMISMTLDKDHEVAIQAVRLLMV
ISQSCEDVLSPDDHKNVLQFVYCSHRPLATTAGQFLYNRLLSNPELSTTRNGGSNQDRHR
ELVLAKVRALINFHTESKLHQHVLYLVDSLWDSGGALLKDWTGLTSLLLPHTSCQDQALS
SAEEAFVIELMVASVRQAAEGPPLSGRGAGKKVISTKEKKLQTDDCAKLTEHFIKALPGL
LSKYSEDAEKLTSFLRIPRYFQMDTCDPENSQCVLALLAELETAVNRHTDVVLLETSARS
YQSLCAQDSAFHSLARPAFDQLIQHWTNTLGTRLAESLSDDCFTYNEDNVLEILSTLKKL
AAFNIAQDLSKWSLYELVTKLLEGELKHGGLPVEVTIEALRCMCSCILWKLNTFGEGLTS
RESALQQRNQLRAFCEKCHRCLSHAEQLVREHAFMCLSDVLIAHNYQLQMWDSSAGTPLL
YTPDPKLQKALLSFILEHIFISPDPDSHSSKVSESESGEGRLEDLHRRRNLLSAYCKLIV
HSVLEMSMAAEVFKQYVKYYNDFGDIIKETLNRTRQMDKMESARTLVQCLQQLYLRLKQE
QDRGNTCSSRIQTYSSIKELARRFSLTFGWDQIKSRESLAMIHRDGIEFVFQGFVQQSEK
QSPPYVSYLTILSEFSSKLLKPDKKTIYGYLQKFAGEQVISNREESWMPLIYYRASLMGT
AEGEDAVSFISSDTNKQPSLTNRSRSPSIRLVQSEGEQRFLSPSTELRGSKLLRSFNDSK
VQQTPLSREHLYLQSDKGLRSSEEVDVDTVEIDV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaaccaactttactgtccagatcggtgcaaaaagagaattcagtagttgat
gtttcttcctgtggatcggtgcatcacacctcaagtgagagaaatgaaaaccgccaaaag
actgtgagaggaaaaaggaaagcccgggaatgctctgagaatgccaaaagaaagcattca
aagagcagtaatggcagcttgggcagagcagagaacgaacagctcaaaaatggagatgtg
gaagccgtcaccctgtttgaagtggtcagcatgggcagaaacgccatgcaggctgtggtg
gacgactggattgatgcatatactgtagacagagacacagcactgcttgatctcatcagc
ttctttattcagtgttcagggtgcaaaggaatggttacagcagagatgtttcagagcaaa
cagggaaccgacgtcatgagtaaaatggtggaggatctggatgaggacgctggttttcaa
tacaagaagttccttgcttttccgtggattttaactgtcacatggccacttgatatggac
agtggcgagtatcccctcatcatgtctggcctgtactggaagagatttcgttcacacttc
tgtgagttcatatcagtgctagtggcccagtgtcagagctgtgtaatcttcgacggctac
ctcttgaacacactcatttcactgctgactgagctctccgattccagagttcgggctttc
aggcacacctgtacgctggcagcagtgaagctgctcagcgctttggtgaacgtggctcta
aacctcagtgtcagtgttgataacagtcagcggttgtatgaagtcgagctggccaagatg
gcaagcaaacgggcttctccgagacttgacaggattcagagaaagatcagtgagttacag
gacagaaaacttgaaattgagaacatgatggatgccattttcaaaggagtctttctgaag
agatacagagacgtgattcccgaaatcagatccatctgtatggaggagctgacggtgtgg
atgaagttgtatagttcagtgtttctgaacgacagctacctgaagtatgtgggatggatg
atgcatgacaagcaacctgatgttcgtctaaagtgtgttctgggtctacagggactttat
caggatcaaaatagctccaaaatggacctttttacagtacggtttaaggagaggatgatc
tccatgacgctggataaagaccatgaagtggccatccaggccgtgagattgctcatggtc
atctctcaatcctgtgaggatgttctgagtcctgatgaccacaagaacgtcctccaattt
gtctattgctcccacagacctctagccaccactgctggccagttcctctacaataggctg
ctcagtaaccctgaattatcaacaaccagaaacggaggttccaatcaggacagacacaga
gagttggtcttagctaaggttcgagcccttatcaacttccacactgagagcaagctgcac
caacatgtgctatacctggttgatagcctgtgggacagtggaggagctctgctgaaggac
tggactggtcttacctcactactcttacctcacacgtcctgtcaggatcaagctctgagc
agtgctgaggaggcctttgtgattgagctcatggtggcgtcagtaaggcaggctgcagag
ggtcctccgttatcagggagaggagcaggaaaaaaggtgataagcactaaagagaaaaaa
ttacaaactgatgactgcgccaaactcactgaacacttcattaaagcgctacctgggctg
ttatccaagtactcagaggatgctgaaaaactgacctcctttctaagaatacctcggtat
ttccaaatggacacctgtgatcctgaaaactcacagtgtgtgctggcattgctggcagag
ttggagactgctgtgaacagacacacggatgtggtactactggaaacatctgctcgctct
tatcagagcctctgtgctcaagattcagcatttcactctctggcccgtccagcctttgac
cagctcatccagcactggacaaacacactggggacacgattagcagaatcactgagtgat
gactgtttcacttataacgaagacaacgttttggaaattctgtccacactgaagaaactt
gctgcattcaacattgctcaggatctgtctaaatggagtctgtatgagctggtgaccaaa
cttctggagggggagttaaaacacggcggtcttccagtagaggtgactattgaggctctg
cgctgtatgtgtagctgcatcctatggaagctcaacacttttggagaaggactaacgtcc
agggagtctgccctccagcagagaaaccagctccgtgccttctgtgagaaatgccaccgc
tgtctgtcgcatgctgagcagcttgttcgagagcatgccttcatgtgtctgagtgacgtt
ctcatagctcataattaccagcttcagatgtgggactcgtctgcaggaactccactgctc
tacacccctgatcccaaactccagaaagctcttctgtcctttatcctggagcacatcttc
atcagccctgacccggactctcacagcagtaaagtcagtgagagtgagagtggagaagga
cggctggaggatttgcaccggcgcaggaatcttctgtcggcgtactgtaagctcatagtg
cacagtgtgttagagatgagcatggctgcagaggttttcaagcagtacgtgaagtactac
aatgactttggtgatatcatcaaagagaccctgaacaggacccggcagatggacaagatg
gagagcgccaggacgctggtgcagtgccttcagcagctgtatctgcggctgaaacaggag
caggacagaggaaacacatgcagctccaggatccagacgtacagcagtatcaaagaactg
gccagacgcttctctctcaccttcggctgggaccagatcaaatcccgagagtctctggcc
atgatccacagggacggcattgaatttgttttccaagggtttgttcagcagtccgagaaa
cagtctccaccgtacgtctcgtacctcaccatcctcagcgaattctccagcaaactgctc
aaacctgacaagaagaccatttatggttatctgcagaagtttgcaggcgagcaggtcatc
agtaaccgagaagagagctggatgccgctgatttactacagggcatctctgatgggcaca
gctgagggagaggatgctgtttccttcatcagctccgacaccaacaaacagccctctctc
actaaccgctccaggtctccctctattagactcgtccagtctgaaggagagcaacgcttt
ctttctccctctacagaactgaggggaagcaagcttttgagaagttttaatgactcaaag
gtccagcaaactccactgagccgagaacatctttatctccagtctgataaaggcctgagg
agcagtgaggaggtggatgttgatactgtagagatcgacgtctaa
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integrated database retrieval system