Danio rerio (zebrafish): 101882236
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Entry
101882236 CDS
T01004
Symbol
rp1l1a
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dre03037
]
101882236 (rp1l1a)
04812 Cytoskeleton proteins [BR:
dre04812
]
101882236 (rp1l1a)
Cilium and associated proteins [BR:
dre03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101882236 (rp1l1a)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
101882236 (rp1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
101882236
NCBI-ProteinID:
XP_005169865
ZFIN:
ZDB-GENE-120711-1
Ensembl:
ENSDARG00000089458
UniProt:
A0A8M2BH38
LinkDB
All DBs
Position
17:5768834..5822116
Genome browser
AA seq
2394 aa
AA seq
DB search
MQRTAQGFFDADPHFHNEPYQFPHPPTSSFGSIVTASSPVKRITFYKSGDSQFKGVKMAV
HKRTFKCFDALLDDLSQKVPLPFGVRTITTPRGTHSIKHLEQFEDGGCYLCSDRRYVKPI
NMEEVGKRQAVWHHHSHPNNTRRKPSRPDEPLSGHQHHHHRHPKRIILVKNSDPAVRRSI
ILSRRTARSLRVFTEEISELMQCHVKRLYTLEGRKIDSIQSLMQCPSVLVCVGREPFRPL
LVESLKKLSDEKLPGVGTRSHSSVCSEGHESKKNVNFGLETKKSIIHPRSDSSNRSTRFS
LSSEKSYQNGLCTTPGQSGCVSTCPYVKEVVMNDDIEKRVLVNKDGSLSVEMKVRFRLFN
DETLQWSTEIKKSSMKVNESVKDTEYLQAKAEYSDPDSVCASEAEEAFATKKHLEETLCQ
NCCNHCQEYDIWKNPMHKEQGASKSPSSSGSSQKITCKKSSVDSTRTISRSSGEYVEHVV
EKASCFQETMEEGDTRVEYCSTSHCCSRSEVSSAGVTSKSKKSYEDGCGSQAKNKCSHTD
ITEAEISPTPHCELIKITGERPISAVSNSSKVLESLKEDQDDDYDDLPPSVSRASNWSQS
CHPESDYQPKCARCRGLQSSPQSYLSPRPPSKESSTAIHSLKVKKHKTSFAAPVDGECMS
TTSPVSKVSPMCNACQCGAISSVASGQEQLFEKGACRIISRQSQASCTSRGQANTPRSNA
SDALEKCDDAGKTSVTSGVPKRSGQSGGCSCCGKSKGFNGNVEEDEPEKADSILSKKSVA
CTSNVLEISDPVNNASDGEATRERSRSKISNASSTSKISKKSNCSAHERCSAGRSLKSER
NEGESVKERTKSAMSAKSDCIISQRDPTPALVLTETDNAEEESQERAVSPMSAHSNLSAA
SKTSYKSISGHSEKAKTPRMCSPNDVEEVPLKLINSQGDEPESAASPNPTLSDNHNEQDT
ELPHEVRSASAMSNKSNQSSQHPSKDSKRSVKSCELQGKSPDVLCELKTEERQCRPLSNC
SKTSVKSNESSKHSQAEAKSQERVPSAMSAKTNASKRSCRSCRANHNIPETTVTSVLNDA
TPDECATPTNKSKRATSPMSQTSEKSNACSERSIKSETQKTTLNALTVTSPLPRKKQSPS
PRSTHNSKSKKTDSRAASGMSENSNVSRRSGKCNCLGSSNGDLKEKLKEDAKDVSGFPDK
IPSDSTLINNIKSSDNQFDEPVSPTSTASVSLGLGEDQKGDDFDDLSTSGMSEDGGNRLH
EVNGVDAEERPKTEASVNSHHKSPVQALLPVSAESVMSAELKKSKSGSQLNENNIRVPST
LSLSSSRSKSPSRLSPGSAKNTAMKERDCKAVNNTNHAERSEASSKHEQSERAAGKVTPA
SEFLDSSKASECSVKSKNGQSIRETDKRSKHSSHCLEMNGLDINSNRDLDDGMVKSLKAS
TSDKRSVKNDASRPNSAGKSDISQSLPLEMPNKKKASVKHPDSSSESVLSRALSAADLLR
EIVGSARPVSRGSKSVASSKNVDKVENKSQKSSRSKPSHSSEHNTKELMPSCLPNASPTE
VVNDWLRNIPIGGYVYEMDVEHTEREAGENASQRDKSEAPESIMEVEEPNENPTGENHVQ
QETNDVEIQACDEKAQLEMCEMDHNPKTLANQDSLQKQCDSSVQVMKVLLGPKLDRSSSL
PEVSPVYGRKLSQSAQGLLDCLANLRLIDSDSKDEKHRKYNEVMMILQSLWLQKPIEDEH
IKQNAKVNQSEDEFNLRYSSGVDVNSGSTSSFKGEKIETSQGTIPPIEKQEISRNDKDDE
EDEVKFTECLDSSKIIPDPVTPDIAERTQGSPVNTRQDDDQENDVTQEDVSSSENKNESD
QTPQTTSYKSSGNESYTMKSPENTSSGTPPSVQKATLTKRVSQDPDPVWVLSLLKKLEKQ
FMLHYTDAMAEFKVRWDLDDNEMLNTMISELKEEVHKRIQSSINRELQKIQSRTGRGPRP
PGNALSRESTAQTEQRRKRLRVMRNKSILTRSDEDYTASGTENSDQRSDDEYCPCDACIK
KKLASRAAQRAQALSFAPVIMEFDLRKILQMKKDPVEPSQSKPEEQCTACQVENNLEVVH
EEVEEVNDDTRGRDVKMADQEETDDADNAIDATLDSEKKDQNDEEANDKSDDVDDGQNEK
EAEPAKEEMGVNDTGDDENEEEGNLVEEDMEKEACTEHAPNIENSDSTAQKMTESAEETE
AVDKQTTEDQSTEEVEESNKDDTPETTKGETPTIEKNADGTSDTGQDDETGKMPKVKIEM
EVRESVEHEDKSSSVEEQNETDDALAKQATKTSTESQQGSMENCTAQAKLKDLQSFMESL
ESHGDSVVITKQPPYKEPHEAANQKDMCNGLTEWQVSPKMNIRANKQKNQKNGH
NT seq
7185 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggacggctcaaggctttttcgacgctgatccccatttccacaatgaaccctat
cagtttcctcatcctccaacatcatctttcggctccatcgtgactgcatcgagtccagtc
aagagaattactttctacaagagcggcgactcccagttcaaaggcgtcaagatggccgtc
cataaacgcaccttcaaatgctttgatgccttactggatgacctttctcaaaaggttccc
ctgcctttcggtgtacgtaccatcacaacgcccagaggaacccacagcattaaacattta
gagcagttcgaggatggagggtgttatctctgctccgaccgccgatatgtaaaaccaatc
aacatggaagaagtaggaaaaaggcaggcggtctggcaccaccatagccatccaaataac
acccgccgaaagccgtcccgacctgatgaacccctatcaggacaccaacaccaccatcat
cggcaccccaaaaggattattctcgtgaaaaacagtgaccccgctgttcgccgatctatt
attctgagtcgacgaaccgctcgcagtcttcgagtctttacggaggagatttcagagctc
atgcagtgtcacgtcaagagactgtacaccctggaggggcgcaagatcgacagtattcag
agtctgatgcagtgtcccagtgtgctggtctgtgtgggtcgagaaccattcaggccgttg
ctcgttgaaagcttgaagaaactctcagatgaaaagcttcctggagtgggcacgaggtca
cactccagcgtctgcagtgaaggccatgaaagcaaaaagaatgtcaactttgggctggag
accaagaaaagcattatccatccaagatccgactccagtaatcgatctacaagattctct
ctttcttcagaaaagtcctaccagaatggattatgcacgacaccaggacagtctggttgc
gtcagcacctgtccttatgttaaagaagtcgtcatgaacgatgacatcgagaagagagtg
cttgttaacaaagacggcagcctttctgtggagatgaaagttcgctttcggcttttcaat
gatgagaccctccaatggtccaccgagatcaagaaatcatcaatgaaagtgaacgaatct
gtaaaagacactgaatatcttcaagctaaagccgagtattcagacccagactctgtttgt
gcatctgaggctgaggaagctttcgcaacgaagaagcatcttgaggaaacactttgtcag
aactgttgcaaccattgccaagaatatgacatttggaaaaacccaatgcataaagagcag
ggtgccagcaagtcccccagttccagtggatcatctcagaaaattacatgcaaaaagtca
tctgtggatagcacacgcacaatttcccgctccagcggggagtacgtggagcatgtggtt
gagaaggcctcatgctttcaggagacgatggaggaaggggacactagagtggaatactgt
tcaacaagtcattgctgcagccgaagtgaagtatcctcagctggcgtcacgtcaaagagc
aagaaatcatacgaggacggctgcgggagtcaagctaaaaataaatgctctcatacggac
atcacagaagcagaaatctctccaacgccacattgtgagctaattaagatcacgggagag
cgtccgatttctgcggtcagcaactcctccaaagtgcttgagtctttgaaggaagatcag
gatgatgattatgatgaccttccaccgagtgtctccagagcttcaaactggtctcaaagt
tgccacccggagagtgattatcaaccaaaatgtgctcgttgtcgtggtctccaaagttca
ccgcaatcttatttgtctcccagacctccaagtaaagaatcgagcactgcaattcattca
ctgaaggttaaaaagcataaaactagttttgcagctccagttgatggagaatgcatgagc
acgacatctccagtttcaaaagtgtcccctatgtgcaatgcatgtcagtgtggagccata
agttcggtggcatctggtcaggagcagttgtttgagaaaggagcttgtcgtatcatttcc
agacaaagccaagcatcttgtacgtctagaggccaagcaaacacccctagatccaatgca
tcagatgctcttgagaaatgtgatgatgctggaaaaacaagtgtcacatcaggtgtccca
aaaagatctggtcagtctggtggatgttcatgctgtggtaagagtaaaggattcaatggg
aatgtagaagaagatgaaccagagaaagccgattccatattgtcaaaaaaatctgttgca
tgcacttcaaatgtgcttgaaatctctgaccctgttaataatgcatcagacggggaagcc
acacgggaacgctctcggtctaaaatttcaaatgcatcttctacttcaaaaatctcaaag
aaatccaactgctctgctcatgaaaggtgttctgctgggagatcattaaaatctgaacgt
aatgaaggagagagtgtcaaagaaagaaccaaaagtgccatgtcagcaaagtcagactgc
attatttcacagagagaccccacgccagccttggtcctgacagaaacggataatgctgaa
gaagaaagccaagaaagagctgtcagcccaatgtctgcccattcaaatctctcagctgca
tcgaagacatcctacaaatcaatatctggacattcagagaaagctaaaacacctagaatg
tgtagtccaaacgatgtagaggaagtgccattgaagttgattaattctcagggtgatgaa
ccagaaagtgctgcaagtccaaatccgaccttgtcagataatcataatgagcaagacaca
gagcttcctcatgaagtgagatcagctagtgccatgtctaataagtcaaaccaatcttca
cagcatccatcaaaagactcaaagaggtctgtcaaatcttgtgagttacaaggcaaaagt
cccgatgttctgtgtgagttgaaaactgaggaaaggcaatgccgtccactgtcaaactgc
tcaaaaacatcagtaaagtcgaatgaatcttcaaaacattcccaagcagaggctaaatcc
caggaaagagttcccagcgcaatgtctgctaaaacaaatgcttctaaaagatcttgtagg
tcctgcagagcaaaccacaacattccagaaaccacagttacctcagtattaaatgatgca
acacccgatgaatgtgcaactccaacaaacaagtcaaaaagagccaccagcccgatgtct
cagacctcagaaaagtctaatgcttgttctgaaagatccatcaaatctgagacacagaaa
acaacactgaatgccttaactgtgacctcaccattgcctaggaaaaagcagtctccttct
cctaggtcaacccacaatagtaaaagcaagaagactgatagcagagcagcaagtggcatg
tcagaaaactcgaatgtgtcccgaagatctggcaaatgtaattgtcttggctcctcaaat
ggtgatttgaaagagaaattaaaggaagatgccaaagatgtatctggttttcctgacaag
atcccttcggattcaactcttataaataatattaaatcctcagataatcagtttgatgag
cctgtaagccctacatccacagcttcggtctctcttgggttaggagaggatcagaaaggt
gatgactttgatgacctatcaacaagtggcatgtcagaggatggtgggaataggttgcat
gaagtaaatggagtcgatgcagaggaaaggcctaagacagaagcgtctgtgaactcccat
cataagtctcccgttcaagccctcttgcctgtctcagctgaaagcgtcatgtcagcagaa
ttgaagaagagcaagtcggggagccagttaaatgaaaacaatatcagagtgccctccact
ttgtcactgtcatcttcacgaagtaagtcaccctcgagactttctccaggaagtgctaaa
aatacagctatgaaagagagagactgcaaagctgtcaacaacaccaaccatgcagaaagg
agtgaagcgtcttcaaaacatgagcaaagcgaaagagctgctggaaaagtcacaccagca
agtgagtttttagactcttcaaaagcctctgaatgttcagtgaagtccaaaaatgggcaa
agtattagagagactgataaaagatccaaacattcttcccattgtttggaaatgaacgga
ctagatatcaattctaacagagaccttgatgatggtatggttaaatctcttaaagcatcc
acatcagacaaaagatctgtgaaaaatgatgcatccaggccaaattcagcagggaagtct
gacatttcccaaagtctaccactggagatgccaaacaagaaaaaagcatcagtcaagcat
cctgattcctcaagcgaaagtgttttatctcgagcactctcagctgcagatctgttgaga
gagatcgttggcagtgcgagaccagtcagtagaggatcaaagtctgttgcctccagcaaa
aatgtcgacaaggttgaaaataaaagccaaaaaagcagcagaagcaaacccagccactct
tcagagcacaacactaaggaattgatgccatcatgtttgccaaatgcttcccctacagaa
gtcgtgaacgactggcttagaaacattcccattggtggctatgtttatgaaatggacgtt
gaacatactgaacgtgaagctggtgagaacgcctcccaaagggacaaaagtgaggcacca
gaaagcataatggaggttgaggaacctaatgagaatcccacaggagagaatcatgttcag
caggagaccaatgatgttgagatacaagcatgcgatgaaaaagcacaactggaaatgtgt
gaaatggatcacaatcctaaaacattagccaaccaagacagtttacaaaagcagtgtgat
tcttcagttcaggtcatgaaggttttactcggtccaaaactagaccgatccagtagttta
cctgaagtttccccagtgtatggcagaaaattaagccagtctgctcaagggcttttggac
tgcctagcaaacttaagattgattgattcagactctaaagatgaaaagcatcgtaaatac
aatgaagttatgatgatcctacagtcgctctggctccaaaagcccatcgaggatgaacat
ataaaacaaaatgcaaaggtaaaccaatctgaggatgagtttaacctgcggtattcatca
ggcgttgatgtaaatagtggttccaccagctcatttaaaggtgaaaaaatagagacctca
cagggcacaataccaccaattgaaaagcaagagatttcaaggaatgataaagatgatgaa
gaagatgaggttaagtttacagaatgtttagattcatccaaaatcatcccagatccggta
actccagacatcgcagaacgaacacagggaagtccagtaaacacacgacaggatgatgac
caggaaaatgatgtaactcaagaagatgtttcaagttccgagaataagaatgaatccgat
caaacgccacaaacgacttcttacaagagctctgggaatgagagttacacgatgaaatct
ccagaaaacacaagctcaggaactccgccgtctgttcagaaagctacgctcactaaaaga
gtttcacaagacccagatcctgtttgggtcctgagcttgttaaaaaagctagaaaagcag
ttcatgctgcattacaccgacgccatggcggagtttaaagtgaggtgggatttagatgac
aatgagatgcttaatacaatgataagcgaactgaaagaggaagtacacaaacgtattcaa
tcaagtattaaccgagagctgcaaaaaatccaaagccgcactggcagaggtccgagacct
ccaggaaatgcactttcgagagagtctactgctcaaaccgagcaacgacgcaagcgtctt
cgggtcatgcgcaataagtccatcttgacaaggagtgatgaagattacactgcatcagga
actgaaaacagcgatcagcgcagtgatgatgaatactgcccatgcgatgcatgcataaaa
aagaaattggcatccagagcagcccagcgagctcaagctttgagttttgctccagttata
atggagtttgatctgcggaaaattttgcaaatgaaaaaggaccctgtcgaaccctcgcaa
tcaaagcctgaagaacaatgcacggcttgccaagttgaaaataacttggaagttgttcat
gaagaggtagaggaggtcaatgatgatactagaggacgtgatgttaaaatggcagatcaa
gaagagacagatgatgctgacaatgcaatcgacgcaactttagactctgagaaaaaagat
cagaacgacgaggaagcaaatgataagtctgacgatgtagatgatggtcaaaatgagaaa
gaagctgagcccgcaaaagaagaaatgggtgtgaatgatacgggagatgacgaaaatgag
gaagaaggcaacttagttgaagaagacatggaaaaagaagcatgtacagaacatgcacca
aatattgaaaatagtgattcgactgcacagaaaatgacagaaagtgctgaggaaaccgaa
gcagttgacaaacagactacagaagaccaatctacagaagaagtagaagagtcaaataaa
gatgatacacctgaaaccactaaaggtgaaacaccaaccattgagaagaacgcagatggg
acgtcagacacaggacaagatgatgaaaccggcaagatgccaaaggtaaagatcgagatg
gaggtcagagaaagtgtagaacatgaagacaaatctagctccgttgaggaacagaatgaa
accgatgacgcactagcaaaacaggcgacgaaaacgtcaacagaatctcaacaaggatct
atggagaactgcacagcgcaagctaaactgaaagatcttcagagtttcatggaaagtctt
gaaagtcatggagacagtgtggtgattactaaacaaccaccatacaaagagccacacgaa
gcagcaaaccaaaaggacatgtgcaacggcttgactgagtggcaagtgtctcctaaaatg
aacatccgggccaataaacaaaagaatcagaagaatggacactaa
DBGET
integrated database retrieval system
