Danio rerio (zebrafish): 101884241
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Entry
101884241 CDS
T01004
Name
(RefSeq) CLIP-associating protein 1-B isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
101884241
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
101884241
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
101884241
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
101884241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EF3_N
HEAT_EZ
Cnd1
TOR1L1_N
Sec7-like_HUS
TTI1
PDS5
RTP1_C1
ParcG
FANCI_S3
TAN
Dopey_N
HEAT_DAAF5
CTK3
Dynamin_M
HEAT_ECM29
Hemerythrin
MMS19_C
Motif
Other DBs
NCBI-GeneID:
101884241
NCBI-ProteinID:
XP_073773243
LinkDB
All DBs
Position
11:complement(46468470..46550332)
Genome browser
AA seq
1555 aa
AA seq
DB search
MESSMEYIVDQVTQKEVGRRFQVAPEIIGYILDRQKSHDLEVDQSMLERMVDSLTTSWIN
ASNFKVALLGMEIVSALVSRLQEHFKTHIGTVLPSLMDRLGDSKEQVRDQAQSLLLKMMD
QAANPQFVWDRMLSGFRHKNNRTREAVCFCLISTLNVYGAQGLTLSKIVPHICHLLGDPS
SQVRDAAMNCLVEIYRHVGERVRVDLGKKGLPQSRLNVIFSRFDDVQRSGLMIVCADKNI
DDEDSVDGGRSSSSSKGASVRRTGSTRRPSSASSRPSSASRRPSSGKESCGAGAVDEEDF
IRAFEDVPTVQIYSARELEDSINKVREILSDEKHDWEQRVAALKKVRSLLLAGAGDYDGF
CHHLRQLDAAFKLSAKDLRSQVVREACITLGHLSSVLGSKFDHGAENIMPALLNLLPNSA
KVMATSGSAAIRIIILHTHYPRLIPIMTSTCMSKSVVVRRRCFEFLDLMLQEWQTTALER
HVSVLMETIKKGVHDADSEARSLARKCYWAFHGHFSREADLLFQALEASYQRALQSQLQS
SDSIMSLPQSDRSSSSSQESLSRPTTARTPAASSLSRAKVTSAGSCSSSGSLQRSRSDVD
VNAAVCAKSRMPAVPTAAPFSSATALPPGSYASLDAAGNVEGKRSVGRVRTRRQSSETPT
GGGASVTDSRGRSRAKAASQSQPGSRSSSPRKLLSYGRVSVVPATHTHRLSKIPRSQGCS
RETSPSRAAQARGSRIPRPSVSQGCSRDTSRESSRDTSPARGFSPLASHRHCRSTGALTG
TDGLQTDRFGLLHQARISASVNAMRILNTGTEVEAAVADALLLGDSRNKRGQVRRRYESP
GVCSDDDVNSDASSVCSERSFSSRNGSAAPHHLRQTEDVAEILNRCASANCTERKEGLMS
LQNLLKNQRVLSRVELKRLCEIFTRMFADPHSKVFSMFLETLLDFISLHREDLQDWLFIL
LTQLLKKTGVDLLGSVQARVQRALDVTRESFPYDQQFNILMRFIVDQTQTPNLKVKVSIL
QYIERLCRLMDSSELLNSSETRLAVSRIITWTTEPKSFDVRRAAQMVLIALFELNTPEFS
MLLAALPKTFQDGATKLLHNHLKNSSNAAATAVSQASPEVISSVKPPKPPATRSSPLTSP
TSGTHTGLSPSRLWGWSSKSSSLLASPHPGSATPPLRAPRRAYSPSLLEYDTENMNSEDI
FRVTEAIQSFSFRSQEDIETAKRDAKREETIGVLSSAMMEGGRTALDNKTSLLNMPSPRP
WMREYNPYNYSDSISAYEKGALAGFEDTEQTREERQQDCGENKVMHPKGFSAGPRQQLEL
VGELLKELSNRSARVEERRAALLELLKVTRDDSLSVWEEHFKSMLLLLLETLGDTDHTVR
ALALRVLKEILRSQPERFKNYAELTIMKTLEAHKDCHKEVVRAAEETACTLAGSIHSEQC
IKVLCPIIQTADYPISLSAIKMQTRVIERISHDSLLQLLPDIIPGLLQGYDNTESSVRKA
SVFCLVAIYSVIGEDLKPHIQQLTGSKMKLLNLYIKRAQTINSTSSSSSDVSAHS
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggagtccagcatggagtatatcgtggatcaggtcacgcagaaagaggtcggacgtcgt
tttcaagttgctccagaaatcataggctacattctggacagacaaaagtcacatgacctg
gaagtggaccagagcatgctggagcggatggtggacagtctgactacctcatggatcaat
gcgagcaatttcaaggtggcgctgctgggaatggagattgtgtctgctttagtgagcaga
ctacaggaacactttaaaacacacataggaacagttctgcccagtttaatggaccgttta
ggtgattctaaagagcaagttcgagatcaggcgcagtcacttctgctgaaaatgatggat
caagcagcaaatccacagtttgtgtgggaccgaatgctgtccggcttcagacataaaaac
aacaggactagagaagccgtctgcttttgccttatttccactcttaatgtatatggagca
cagggtttaaccctcagcaagattgttcctcatatttgtcatctgttaggagacccgagc
agtcaggttcgagacgctgctatgaactgtctggtggagatttacagacatgttggagaa
agagtgagggtggatctgggcaagaagggactcccacagtcacggttgaatgtgattttc
agcaggtttgatgacgttcagcggtctggactcatgattgtgtgtgccgataagaacatt
gatgatgaagactcagtggatggaggtcgatcctcatcatcctctaaaggagcttcagta
cggagaacaggatccacacgcagacccagctccgcctccagcagaccaagctccgcctcc
aggagaccaagctctggtaaagagagctgtggtgccggagctgtggatgaagaagacttc
attcgtgcctttgaagatgtgccgactgtacagatatactcagcccgagagctggaagac
tccatcaataaggtccgggagattctgtctgatgaaaaacacgactgggagcagagagtg
gccgctctgaagaaggttcgctctctgctgttggccggcgcgggcgattatgatggtttt
tgtcatcatttgcggcagctggacgcagctttcaagctgtcggctaaagatctgcgctct
caggtggtgcgcgaggcctgcataacactcgggcatctgtcgtccgtgttgggcagtaag
tttgatcatggagctgaaaacatcatgccggcgctactgaacctgctgccgaacagcgct
aaagtcatggccacatccggcagcgcagccatacgcatcatcatactgcacactcattat
cctcgtctgattcccatcatgaccagcacctgcatgtctaaatcagtggtcgtcagacga
cgctgctttgagtttctggatctaatgcttcaggagtggcaaactactgctttggagaga
catgtctctgtcctgatggagacgataaagaaaggtgttcatgatgccgactctgaggct
cgctctctcgccagaaagtgctattgggcttttcatgggcacttcagcagagaggcggat
ctgctgtttcaggctctggaagcgagttatcagagagcgcttcagtctcagctgcagagt
tcagacagcatcatgtcactgccacagtctgaccgctcgtcatccagctcacaggagagc
ctcagccgcccgacgactgctagaacacccgccgccagcagcctgagcagggctaaagtt
acgagtgccggctcgtgctcctcatctggaagtcttcagcgttctcgcagtgatgtggat
gtgaacgctgcagtctgtgccaaatcccggatgcctgccgtgcccactgctgcccccttc
agctccgccactgcactgccgcccggatcctacgcctcgctggacgctgccggtaatgtg
gagggtaagcgaagtgtgggtcgagtgcgcaccagacgccagagttcagagacgccgact
ggaggcggagcgtctgtgactgacagcagggggcggagtcgagccaaagctgcctcccaa
tcacagccgggcagtcgctccagttctccacgaaagctcttgtcgtatggaagagtgtct
gtggttcctgcaacacacactcacagactcagtaaaatccctcgcagtcaaggctgcagt
cgagagaccagccccagcagagcagcacaggcacggggcagtcgtatcccgaggcccagt
gtgagtcagggttgtagtcgcgacacgagtcgagagagcagtcgagacaccagtcctgcc
cgcggcttcagtcctctggcatcacacagacactgtcgctccacgggtgcactgacgggc
actgatggtctgcagacagatcggttcgggctcctccatcaggctcgtatctctgcgtcg
gtgaacgccatgcggatcctgaacaccggcacagaggtggaggcggcggttgcagacgct
ctgcttctgggagactcgaggaataagcgtggtcaggtgcggcggcggtatgagtctcca
ggtgtgtgttcagatgatgatgtgaacagtgatgcgtcgagtgtgtgctctgagcgatcc
ttcagttctcgtaacgggagtgcggccccacatcacctgcgccagacagaggacgtggcg
gaaatcctgaaccgctgcgccagcgctaactgcactgagaggaaagagggactgatgagc
cttcagaacctgctgaagaaccagagagtgctcagtcgtgtggagctgaagcgcctgtgt
gaaatcttcaccaggatgtttgctgatccacacagcaaggtgttcagcatgtttctggag
actctgctggacttcatctctctgcacagagaggatctgcaggactggctcttcatcctc
ctcacacagctgctgaagaagacgggggtcgacctgctggggtctgtacaggccagagta
cagcgcgccctcgacgtcacacgagagtcgtttccatacgatcagcagttcaacatcctg
atgcgcttcattgttgatcaaacacaaacgccaaacctgaaggtgaaggtgtcgattctg
cagtatatcgagcgtctgtgcagactgatggactcgtctgagctgctgaactccagtgag
actcgtctggccgtctctcgcatcatcacctggaccactgaacccaagagcttcgacgtc
aggagggctgctcagatggtcttgatcgccctgtttgagctcaacactccagagttcagc
atgctattagcagctctgcccaaaaccttccaggacggagccaccaaactcctgcacaac
cacctgaagaacagcagcaatgcagcagccactgcagtgtctcaggcgtctcctgaggtc
atcagcagtgtgaaacctccgaaaccccctgcgacccgcagcagcccactgacttcaccc
accagtggcacacacaccggactctcacccagtcgtttgtggggctggagctcaaagtct
tcttctcttctcgcctcccctcaccccggctccgctacaccccctctgcgggccccacgg
cgggcgtattcgcccagtctgctggagtacgacacagagaacatgaactcagaggacatc
ttcagagtgactgaagccatccagagcttcagtttccgcagtcaggaggacatcgagacc
gccaaacgagacgcaaagcgggaggaaacaattggtgtgttgtcatctgctatgatggag
ggcggccggacggcgctggacaacaagacgtctttattaaacatgccgtctcctcgaccg
tggatgagagaatacaacccgtacaactacagtgactccatcagcgcgtatgagaaagga
gcgctcgcagggtttgaggacacagagcagacacgagaggagcgtcagcaggactgtgga
gaaaacaaagtcatgcatcccaaaggcttctctgcagggccacggcagcagctggagctg
gttggtgagctgctgaaggagctgtccaatcgcagcgctcgtgtggaggagagacgggcc
gctctgttagagctgctgaaggtcacgcgggacgacagtctgagcgtctgggaggagcac
ttcaaaagcatgttactgctgctcctggagacgctgggagatacagaccacaccgtccga
gcgctggctctgcgtgtgctgaaggagattctgcgcagtcagcctgaacgcttcaagaac
tacgcagaactgaccatcatgaagaccctggaggcgcataaagactgccataaagaggtg
gtccgggctgctgaggaaacagcctgtactctggcgggctccattcactcagagcagtgc
attaaagtgctgtgccccatcatccagaccgcagactatcccatcagcctctctgccatc
aagatgcagaccagagtcatcgagcgcatctcccatgattccctgctgcagctgctgccc
gacatcatcccgggactcttacagggctatgataacaccgagagcagtgtacggaaggcc
agtgtgttttgtttggtggccatttattcagtgattggtgaagatctgaagcctcatata
cagcagctgaccggcagcaagatgaagttactgaatctgtacatcaagcgagctcaaacc
attaacagcaccagcagcagctcttcagacgtgtcggcgcacagctga
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