Danio rerio (zebrafish): 101885257
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Entry
101885257 CDS
T01004
Symbol
rai1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
101885257 (rai1)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
101885257 (rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
101885257
NCBI-ProteinID:
XP_073801300
ZFIN:
ZDB-GENE-101203-2
Ensembl:
ENSDARG00000076679
LinkDB
All DBs
Position
3:66926738..67034830
Genome browser
AA seq
1935 aa
AA seq
DB search
MQSFRERSGFHSNQHCYQQEPQELPRLESYRHHYSQSRQGYEPHALASAGMSTAGSKDCY
GQQNYPVYTSATQTKKPYRGGKTPNQHLQAGYSNHMGTGYTAQYMSEGHLQQKWDESAQM
TQFEQDMVGRLESGSSQYLEQNMLAISQSQCHLPAQSSAPVYTSPHQQGIPPNPAPSPLM
YPQGHMHFPQHSQTSSSPSSAYMDKCNTVSHGYKGYGIPPNAQYGRQLSNHSSLKQSGYR
PQNNYGYQQTPSRSGFEQGSLQGMSGTQESLQKFQHYNQTQQNYCITDISVRSPEQYYQT
CSPSSSHSPARSVGRSPSYNSTPSPLMANADSFQYGQPPINPGASSSTGLQNEQNMLMPP
HTHSSSSVNQTQSFSGSMKERFSEKLLTNPSLWSLNALTSQVENISNNVQQLLLSEALMA
SKKTSKRNHPKKGEDYRGQLKGMDESCPENQHGPSPSDAYSIPRSMTAELQEGGYSSSTE
DQMERNYYYFGQEKGQGHTQTHSRLSLDTVSTCSLNSADDVSVRSGDSVRSLQSVASEDN
LNCDPRVQRALSEEEPNSSLCCIRDERSPIGVTAPSPMKQESDSPPDIKRSESTQKENFE
ESAWTERMADEDKTEQSKPSAEHDCKGEVTEKQEKWLEDEKGPALFQKINKTVLEEGYSY
ETEENIYQGLQNKYDSEKENTTEIDCFAELNHKCDEDTEIKTEHFKSEPQTSVEMPTEDS
PSNSATELCLPEKEEHSSSENSVETPTCTLEGPADTLEEQTSVLSHTSTEVGDEKDSILT
SSEEVINNKTESQESFPDVCGTYEEAENMQQVNTETAESIAQDTPHRDSERRSVICDIAP
QTHTAKSDFSALNEKTTPLAQARDHHIDCSDAKVLEPDSPQLPGKSILHSAPSWADTPPS
PKKADEDMEPGISCPSAVTPSAKPEAFTPSSHTRMFGKKHVRGRRRPMSSTAGIRRQLSI
EGDTQTPNIPSSKTTDIVDQMETAHQNVSSQTPKLVTESLPSRMCTRSYGSQGSPKVSPQ
DRRKPGAKPAPKPSSKIAVKPGPKSNPKPAPKHSPKSITKPGSKSVPKSEVMPSVKPGPK
PGLKSTGSKESPKPCPKSGPKSATKSGPKTASKPASKPGSVPGEILAPKSNQNTAESKPI
VASVAKGPGRPKGISKNKQMKMKQDENVQTTTEHTKDTHCTQELNLQDVTTELALDTIVG
VVDTTKGETVAPTLECTLDSSCLKSLGREQKSMVLRSRKQTKEKLTEEKEQNDDKSTKTP
SAMVMQDVTVDQSCKTEPSNLELPKQKDVSTDSLQQPDEEVVSTKRKCSLPTSETKKRKK
GRQDEVKAQDSPLDIVHIPKGKRKRGQRLLVESVSTTLTTDTLPTDDISDVPSVPPQCPT
KTKYLPPRKGRGLKYEAMVQKITSPGSKKQPVSNQADIALEESTLKPVPQVPDQKETTNA
PEMPQKEGESTISTQEPENTEIQTPRKKRRKWATVESSDAPDVSLDGGSLIINTPRLAKQ
RAIKNNHEMHLKQRKKRRKGTEPQENIPIVEQPESTQTEVLPTSPPPPETLEQTECKEPP
NEVCVPLMKPKRGRRPSLKKKQEELSKSQKEDENAIEKKKKTGPKKKCVDAVKVVVKRPK
IKTNELSPTVQGTLSDLRPDLSDGKSSFRPYVHIDSSMDIASSCTIVNRPEEEQMLAQAK
TKSVPNIKNQAAKTGSNSSVMLQGPLVNKSLSDRCLTCCLCGKPANYRELGDLCGPYYPE
DCIPRKTLSLTHRSEFRQNSNCANETESSSIVKNTQSVCEEGIHQEKANEGHSRRSKRAI
RELSRTRPSSRMRFKRLLILQSRLSGASPPAGVEGIETSLQRLQMEAEEKEHWAHEACAV
WTTGIVLVADKLFGLTEAVQKAAHAKCSGCQGEGASVCCGWKSCTQSYHYICAKESGCTF
EEETFSIRCPKHKEM
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttcagagagcggagtggtttccatagcaaccagcactgctaccagcaggaa
ccccaagaattaccgcgcctcgagagctacagacatcattacagccagtccagacagggc
tacgagccacacgctttagcttctgccgggatgtcaacagcgggatctaaagactgttac
ggacagcagaactatcctgtctacaccagcgccacacagactaagaaaccatacagagga
ggcaaaactccaaaccagcatctacaggcgggctacagtaaccacatgggcaccggatac
acggcccagtacatgagcgaaggtcacctgcagcagaaatgggatgagtcagctcagatg
acccagttcgagcaggacatggtgggtcgtctggagtctgggtcatcgcagtacctagag
cagaacatgctagctatctctcaaagtcagtgccatctccccgcccagtcctccgcccca
gtctacaccagtccccatcagcagggaatcccacccaacccggcgccatctcctttaatg
tacccacaaggccacatgcatttccctcagcactcgcaaacctcttcttcaccttcatcg
gcctatatggacaaatgtaatacagtgtcacatggctacaaaggctatgggataccacct
aacgcccagtatggaaggcagctgagcaatcacagcagtctaaaacagagtggatacaga
cctcagaataattacggttaccagcaaactccctcgaggtctgggtttgagcagggctcc
ctgcagggcatgtctggtacacaggagagccttcagaaattccagcactacaatcagacc
cagcaaaactactgcataactgatatttcagtaaggtcgccggaacaatactaccagacc
tgcagtcctagttccagtcattcaccggcgaggtctgtgggaagatctccctcgtacaac
tccacaccatcacccttgatggcgaatgctgattccttccagtatggccagcctcccatc
aaccctggggcttcatcatccacaggtttgcagaatgaacaaaatatgctgatgccccct
cacacccactcatcgtccagtgtgaaccagacccagagcttctctggatcaatgaaagaa
cgattctcagagaagctcctgaccaaccctagtttgtggagtctcaatgccctaacttct
caggttgaaaacatctccaacaatgtccagcagctgctgctgtctgaagctctcatggcg
agcaaaaagaccagtaaacgaaaccatcctaaaaagggagaagattacagaggtcaactg
aaaggtatggatgagtcttgtcctgaaaatcaacatggtccttctccgtctgatgcttac
agcattcccaggtccatgacagcagaactgcaggagggaggatactccagcagcaccgag
gaccagatggaaaggaactattattattttggtcaggaaaagggtcaaggacatacccag
acacactcccgtctcagccttgacacagtgtccacatgctccttaaactcggctgacgat
gtctccgttaggtcaggagactcagttcgaagtctccagagtgtagcctcggaggataat
cttaactgtgaccccagagtacaaagggcactgtctgaagaggagcccaatagctctctc
tgctgcattagagatgagaggtctcccatcggcgtaacagctccaagtcctatgaaacaa
gagagtgattcaccaccagacataaaacgttcagagagcactcaaaaggagaactttgag
gagtcagcatggaccgagaggatggctgatgaggacaaaaccgaacaaagcaagccgtct
gctgagcatgattgcaaaggagaggtcactgaaaaacaagagaagtggctggaggatgag
aaaggtcctgctctttttcagaaaataaataaaaccgtgctggaggaaggttactcctat
gaaacggaagagaatatctaccaagggctacaaaacaaatatgattcggagaaagaaaac
acgacggagatagactgctttgctgaactcaatcacaaatgtgacgaagacacagagata
aagacagagcattttaaatcagagccacaaaccagtgttgaaatgccaacggaagactct
cccagcaattcagccactgaactgtgtttgccagagaaagaagaacactcaagcagtgag
aattcagtagagaccccaacatgcacccttgagggacctgcggacacccttgaggagcag
acttctgtcctctctcatacgtccactgaggtaggagatgaaaaggattcaattctgaca
agctcagaggaggtcatcaataataaaacagagtcacaggagtcttttccagacgtctgt
ggcacatatgaggaggcggaaaacatgcaacaagtaaacacagaaactgcagaaagcatt
gcccaggacacaccacacagagacagcgaaaggaggtcagtcatatgtgacattgcacct
cagactcacactgccaagagtgacttctcagctctcaatgagaaaacaacacctttggct
caggcaagggatcatcacatcgattgtagtgatgcaaaggtgctggagcctgactctcct
cagttgccaggcaagtcgatactgcactctgcaccatcttgggctgacactccaccctct
cccaagaaagcggacgaggatatggagccaggaataagctgtcccagtgcagtgactccc
tcagccaaaccagaggcttttacgccatcttcacatacaagaatgttcggtaagaaacat
gtacgaggcaggaggagaccaatgagctcaactgcaggaataagaaggcagctaagtata
gaaggagacactcaaactcccaatataccttcaagcaaaaccaccgatattgtcgatcag
atggaaactgcccatcagaatgttagtagtcaaacaccaaaacttgttacagagagttta
ccatcacggatgtgcactcgctcctacggttcacaaggtagcccaaaggtctcccctcaa
gacagaaggaaaccaggtgcaaaacctgctccaaaaccaagctcaaaaatagctgtcaag
ccaggtccaaaatcaaatccaaaacctgcaccaaagcatagtccaaaatcaattacaaaa
cctggttcaaaatcagttcctaaatccgaggtcatgcctagtgtaaaacctggccccaag
ccaggtttaaaatccacagggtccaaagaaagtccaaagccttgtcctaaatctggccca
aaatctgccactaaatctggtccaaaaactgcttctaaacccgcctcaaagcctgggtca
gtaccaggagagatacttgctccaaagtcaaatcaaaacacagcagagtcaaagccaatt
gtggcatcagtagctaaaggccccggtcgaccgaaaggaatcagtaagaacaaacagatg
aagatgaaacaagatgaaaatgttcaaacaactacagaacataccaaggacacacactgt
actcaagaacttaatttgcaagatgtgaccacagaattagctttggacacaattgttggt
gttgtggataccactaaaggtgaaaccgtggctcccactttggagtgtacgctagacagc
agctgcttaaaatcattagggagagagcagaagtctatggtgttaagatcacggaagcaa
acaaaagagaaactgactgaagaaaaagaacaaaacgatgataaatctactaagacacct
tcagcaatggtcatgcaggatgttactgtggatcagtcgtgtaagactgaaccttcaaat
ctcgaattgcccaagcagaaggatgtctccacagattcacttcaacagccagatgaagag
gtggtttccaccaagagaaaatgcagtttaccaacctcagaaaccaaaaagaggaagaaa
ggaaggcaagatgaagtgaaggcacaggattctccattagacatagtccacattccaaag
ggaaagagaaagagaggacaacgtttgcttgtggaatcagtaagcactactttaactact
gatacccttcccactgatgacatcagtgacgtgccatctgtacctcctcagtgtcccact
aaaaccaaatatttgcctcctcggaaaggcaggggacttaaatatgaggcaatggttcag
aaaataacatccccagggtccaaaaagcaacctgtaagtaaccaagcagacattgcacta
gaagaatccacgttaaaaccagtgccgcaggtaccagatcaaaaggagacaacgaacgcc
cctgagatgcctcagaaggagggcgaaagcacaatcagtacacaagaacccgaaaacaca
gaaattcaaactccaaggaagaaaaggagaaagtgggccactgtggagagcagcgatgct
ccagatgtaagcctggatggtggaagtctgattatcaacacaccgagactagctaaacag
agagccattaaaaacaaccacgagatgcatctgaagcagcgaaagaagagaagaaaaggc
actgaacctcaagaaaacatccccatagtggagcaaccggagtctacacagaccgaagtc
ttgcctacatctccacctccgccagaaactcttgaacagacagagtgcaaggagccacca
aatgaagtatgcgtaccactaatgaaacccaaacgcggcaggcggccatcacttaaaaag
aaacaagaggaactctcgaagagtcaaaaagaagacgaaaacgcaatcgagaagaaaaaa
aagactgggcccaaaaaaaagtgtgtggatgccgttaaagttgtggtgaagagacctaag
atcaagacaaatgaactgtctccaacagtacaagggacattatcagacttgcgcccagat
ctaagtgacggaaaatcctccttcagaccatacgtacacatcgacagctctatggacatc
gcatcttcatgcactatcgtcaacaggccagaagaagagcagatgctcgctcaggctaag
acaaagagtgtacctaatatcaaaaatcaagctgcaaagacagggtccaactcttcagta
atgctccagggccccttagttaacaaaagcctatctgacagatgtctaacgtgctgttta
tgtggaaagccagctaattacagagagctcggggacttgtgtggcccctattatcctgag
gactgcataccacgaaaaacgctgtcattaacacacaggagtgaattcaggcaaaacagc
aactgtgccaacgagacggagagtagtagcattgtgaaaaacacacagagtgtgtgtgag
gagggcatccatcaggaaaaggcaaacgaagggcactccaggaggagcaaaagggcaatt
cgggaactgtcgagaaccaggcccagttcgcgaatgaggtttaaaaggctgctgattttg
cagagcagacttagtggagcgtctccccctgctggtgtggagggcattgaaacaagtctg
cagagattacagatggaggccgaggaaaaagagcactgggctcatgaagcgtgtgctgtc
tggaccactggcatagtcctggtggcggataaactctttggactgaccgaggctgttcag
aaagctgcacatgcaaaatgctccggatgccaaggtgaaggagcctcggtctgctgcggc
tggaagagctgtactcaaagctaccattatatctgcgccaaagagtcgggctgcacgttt
gaagaagaaaccttctctattcggtgtccgaaacacaaggagatgtaa
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integrated database retrieval system
