Danio rerio (zebrafish): 101886077
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Entry
101886077 CDS
T01004
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101886077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
101886077
03036 Chromosome and associated proteins [BR:
dre03036
]
101886077
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101886077
Coactivators
SAGA/TFTC/STAGA complex
101886077
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
101886077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
101886077
NCBI-ProteinID:
XP_073786234
LinkDB
All DBs
Position
18:complement(2429784..2615692)
Genome browser
AA seq
869 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLGGQTDPSAGQPENTRGKQQQAGARAQLP
AHDSPSQPQQQAQQQQQNARKATRNPDPDPKDVSPEKHAKAPEKESALKSHGSIIIITAA
AASDAPAPGNKGADTRKKHPTRSLRSAASHSLNGNGAAASASVSSTTFTVSSNPQAIALD
RGTPTIALHRLPRHIIASIAQKGNGTSVSALVQQGARVNHSKAPAEANAKPALSCSPPPP
VKPAVAPVIRPAQTQTQRLVAPQLIVRPPPPQQQPQQQTTIQLPPGFTIPPGMVLVRTEM
GQLVMVPQQALAQAQAQNSISPRPSTPTSVATFRVTTPQSPVSAPAIRPAPAAQTKLVQS
SSPSPAAQTSTTPGPTKAPVAAAVAVTAAPQQLQPALGPQGPLTQMPLAPQSAAAAAPGA
PVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIDPEEFTSRLQ
SELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPPQPNKSSVTPVQSSVSVRPHQPNS
TTVLPQGMKRAVGPGGQIRMPVVITQTVRTTGTLGKPAALQTGRCPAGVTIQLSANQKNK
LNDPGGGTFRDDDDINDVASMAGVNLNEESARILATNSDLVGTQIRSCKDEAFLPIGLLH
RRILETAKRFGVTDVPLEAVNFISHATQSRLRTVLEKVSSIAQHRMDSCKEDEWCEPSSD
VRAQLKFFEQLERMEKQRKDEREREILLRAAKSRSRQEDPEQARLKQKAKEMQQQELAQM
RQRDANLTALAAIGPRKKRKVDSPGATTTSTEVLGSSAGSPAGSSSSSSSSRQFPRQRIT
RVNLRDFIFFMEQERESSRSLLLYRALLK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagacatgctcttctccgaggtggacgagaaagcc
gtgagcgatctggtgggctctctggagtctcagcttgggggccagaccgacccgtccgcc
gggcagcccgaaaacactcgcggcaagcagcagcaggcaggagcaagagcgcagctgccc
gctcatgactctccatcacaaccacaacaacaagcacagcagcagcagcagaacgcgcgc
aaagcaacgcgcaacccggatccagacccgaaagatgtcagcccggaaaaacacgcgaaa
gctccggagaaggagagcgcgctcaaatcacatggcagcatcattatcatcaccgcggct
gcagcatccgacgctcctgcgccgggcaacaaaggtgcggacacccgcaagaaacacccg
acgcgctccctgcgctcagcggcatcacacagtctcaatggcaacggcgcggcagcatca
gcatccgtctccagcaccaccttcactgtgtccagcaacccgcaggcgatcgcgctggac
cgcgggacgcccaccatcgccctgcaccgactcccgcgtcacatcatcgccagcatcgcg
cagaagggcaacggcacgtccgtgtccgcgctggtccagcagggcgcgcgggtcaaccac
agcaaagcgcccgcggaggccaacgcgaagcccgcgctgagctgctctccgcctccgcct
gtcaaacccgcggtggctccggtcatcagacccgcgcagacgcagacgcagaggctcgtg
gcgccgcagctgattgtcagacctccgccgccacagcagcagccgcagcagcagaccacc
atccagctgccacccgggttcaccatcccaccaggaatggttctggtgcgcacagagatg
ggtcagctggtgatggttcctcagcaggctctggctcaagctcaggctcagaacagcatc
tcaccgcggccctccacacccacgagcgtggccacattcagagtcacgaccccacagtct
cctgttagcgctccggctattcgtcctgctcctgcggctcaaacgaaactagtccagtcc
agctccccgagccccgcagcccagaccagcaccacacccggacccactaaggcccccgtg
gcagccgccgtggcagtgacagcagctccccagcagcttcagccggccctcggcccccag
gggcccctcactcagatgccactggccccgcagagtgcagccgccgcagcccccggagct
ccggtcgtctcccaggagatgcaggagaacgtcaagaagtgcaagaacttcttagccacg
ctgatcaagctggcatcccataattccccttcaccagagacgtcgcggaatgtgaaggcg
ctggtgcaggatttactggatgcaaagatcgacccggaggagttcaccagccgactgcag
tctgagctcaagtcgtctccgcagccttacctggtcccgttcctgaagaagagtctccct
gcactgcgtctatctctcctgaacagccagcagtctctcactcagcctccgcagcccaat
aagagcagtgtgacgccggtgcagagcagtgtcagtgtccgtccacaccagcccaacagc
accactgtcctgccacaggggatgaagagggcagtgggtcctggagggcagatccggatg
cctgtggtcattacacagacagtcagaaccacaggtactttagggaagcctgcggccctc
cagacaggcagatgccccgcgggcgtcaccatccagctctcggcaaaccagaagaacaag
ctgaatgaccctggaggaggaacattcagagatgacgatgacattaatgacgtggcatcg
atggctggtgtgaatctaaatgaagaaagcgctcgtatacttgccactaactctgacctg
gtgggaacgcagatccgctcctgtaaagacgaggcgtttctccccataggcctgttacac
cggcggatactggagacagctaagaggtttggagtgacggacgtgccgctggaggcagtg
aactttatttctcacgccacgcagtccagattacgcacggtgctggagaaagtttcctcc
attgcacagcacagaatggactcgtgtaaggaagacgagtggtgtgagccatcgtctgat
gtgcgtgcgcagctgaagttctttgagcagctggagcggatggagaagcagaggaaagac
gagcgtgagcgggagattctcctcagagcagccaagagtcgctcgcggcaagaagatcca
gaacaagcccgtctgaagcagaaagcaaaggagatgcagcaacaggaactcgctcaaatg
agacaacgagacgcaaacttgacggccctcgccgccatcggccctcggaagaaacgcaaa
gtcgactctccaggagccacaaccacaagcactgaggtgttgggcagttcagcaggttct
ccagccggctcctcgtcttcgtccagctcgtcgcgtcagtttccccgtcagagaatcacg
cgggtgaacctcagggacttcatcttcttcatggagcaggagcgagagagcagtcggtcc
ctgcttctgtaccgcgcactgctcaagtag
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