Danio rerio (zebrafish): 101886904
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Entry
101886904 CDS
T01004
Symbol
csgalnact1b
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
dre01100
Metabolic pathways
Module
dre_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
101886904 (csgalnact1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dre01003
]
101886904 (csgalnact1b)
Enzymes [BR:
dre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
101886904 (csgalnact1b)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
101886904 (csgalnact1b)
Glycosyltransferases [BR:
dre01003
]
Glycan extension
O-Glycan
101886904 (csgalnact1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Motif
Other DBs
NCBI-GeneID:
101886904
NCBI-ProteinID:
XP_005166733
ZFIN:
ZDB-GENE-130530-957
Ensembl:
ENSDARG00000089233
UniProt:
F1RD96
LinkDB
All DBs
Position
8:635379..648898
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AA seq
488 aa
AA seq
DB search
MRCSLRCVFWALLFLCVLLLYRQSCRIHMQSGIPKDGDLEQDLLELQDQHFLQLSTNLSR
LIQELRGELRRSAFALPEDQQELQDFLHQQILRAESRSADRLEDEFMVLPFQSFSLRSVC
QLETGLSRRPEEAELRPDRRNELNEALEAALHLLNQPEPGDSQTRRIYSPKHFSEGIFRT
ERDTGTIYDLAFREDNVPDFRRLVFFRPFAPLVKVREDLLDASQLLINIIVPLTNTVDTF
RRFMQQFSEVCIGQDGLTHLTVVFFGSEKMEEVKGILDVISRRMKYRNMTLIHLNEDFSR
SRALDVGARAWKHDNVLLFFCDVNVHFTAEFLNSCRINAQPGQKVFYPVMFSLYNPELLY
GQHVPPAQQQMVVRKDYGFWKDDDFSTACLYRSDFMNAGGFGAFSARGSDTADLHLYRKL
LHSGMMVVRAPSRGLFLMWHQTVCSSTEAFQQCVQNKALNEASHAQLGLRVFQKQIQEHL
SRRQHMQT
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagatgctccctccgctgtgtgttttgggctctgctctttctctgtgttcttctgctg
tatcgtcagtcctgcaggattcacatgcaatctggcatcccaaaagatggagatctggag
caggatttgctggagctccaggaccagcactttctgcagctctccaccaacctcagcaga
ctcatacaagagctgcggggcgagctgcgccggtctgcgtttgctcttccagaggatcag
caggagctgcaggatttcctccatcagcagatcctccgggccgagagcagatctgcagac
cggctggaggacgagtttatggttctgcccttccagagcttcagtctccgcagcgtctgt
cagctggagaccggcctcagcagacgaccagaggaggcagagctcagacctgaccgcagg
aatgagctgaacgaggctctagaggcggcgctacacctgctgaaccagccggagcctgga
gactcacagaccaggaggatttactctcccaaacacttctctgaaggaatctttcgcaca
gagagggacacaggaactatatatgatcttgcgttcagagaagacaatgttccagacttc
aggagactggttttcttccgtccgttcgcaccgctggtcaaagtcagagaggatctgctg
gacgcctcacagttactcatcaatataatcgtaccgttgaccaacacggtggacacgttc
agacgattcatgcaacaattcagcgaggtctgcattggtcaggatggactgacgcatctc
accgtggtgttctttgggtctgaaaagatggaagaagtgaagggaattttggacgtaata
tcgaggaggatgaagtacaggaacatgactctgatccatctgaatgaagatttctccaga
agtcgagcgttggatgttggagctcgagcctggaaacacgacaacgtgctcctgttcttc
tgtgatgtaaatgttcacttcactgcagaattcctcaactcctgccgcatcaacgcgcaa
ccaggtcagaaggttttctatccagtgatgttcagtctgtataatccagaactcctctac
ggccagcacgttcctcctgctcaacagcagatggtggtcaggaaggactatggattttgg
aaggatgatgatttcagcactgcgtgtctgtacagatcagatttcatgaacgcaggtgga
tttggtgcgttttcagcgagaggaagtgacacagcagacctgcatctctacaggaagtta
ctgcacagtggtatgatggtggtccgggctccgtctcgaggcctgttcctcatgtggcat
cagactgtgtgttcctccactgaggcgtttcagcagtgtgtgcagaataaagctctgaat
gaagcgtctcatgctcaactgggactgagagtcttccagaagcagattcaagaacatctg
agcagacgacaacacatgcagacctga
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