Danio rerio (zebrafish): 108191643
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Entry
108191643 CDS
T01004
Symbol
lima1b
Name
(RefSeq) LIM domain and actin-binding protein 1
KO
K23026
LIM domain and actin-binding protein 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
108191643 (lima1b)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108191643 (lima1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Mit_KHE1
Motif
Other DBs
NCBI-GeneID:
108191643
NCBI-ProteinID:
XP_021335365
ZFIN:
ZDB-GENE-030131-4116
UniProt:
A0A8M9QLS4
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All DBs
Position
11:2329648..2377644
Genome browser
AA seq
1151 aa
AA seq
DB search
MDAAPFSRKQWASQSLRITAKELSLVGTRGKSNAISERFSKYQRAAEEASADKKKPPVDS
LPLSVRSGNLSVLRKRWEQEKPPAHLSVAPGSLRAPSVSSKPNGPTQPPALSAKPSVPPQ
PTSSKPSSLSKPSTSSSSPPETLTSSIKPNSPPQPLSLSSKPIDSSKPPTSSIKPIDSPE
LSTSSKKPIDSPEHPTSSKKPIDSPELSTSSKKPIDSPELTSSKQPVDSPKPPTSSRSPP
ETLTSSSKPFDSSKPPTSSIKPIDSPEPTSSKKPIDSSKPPTSSTKPIDSPELPTLSKKP
IDSPKPPTSSSTPPEILTSSSKPIESPELTLSKKPIDSPKPPTSSSTPPEILTSSSKPIE
SPELTLSKKPIDSPKPSTSSRSPPETLTSSSKPIDSSKPPTSSTKPIDSPELPTLSKKPL
DSPKPPTSSTKPSSLSEHPFSSSNPPEPSSSSTKPKNPPQAPSPTKPMPQASVSVEATAH
ERPENTRVEMETKHKRQVEERKDMESSSEPMSPLEKPAVPLNNLKMMFEKGNSKVHTDAN
GSSEDGDTLKASKGTSPLKRTGSIKDRLTRYQLAVCKQASVSRSASQSEADDSVFCADSK
EMAPSAGHGRTLSKVPGTNIANINGEYVNASSPGTETLLSENKEFHKVTKPFQVAVPDRC
VSCQQTVYQLERLVANQQIYHKKCFRCAVCSTKLSLAAFASLHGSIYCKPHFNQLFKSKG
NYDEGFGHKQHKEMWSPRTSQEEPEENSNSVSVKPVEKAEESHRGAKFTEQTPIIESRSQ
TERPQSTSAETRKLRVAWPPPADSDGGAKVSSPAEVSKGPSRFFRAKWPPEDESPSSQQS
TERAELKTLRRSTSLRERSRPFSLAPSLSSNPSKQDAQSAPKAVRRGSLEDLRSRSTAKT
EEKIPDAKTKEDDGQSKIEKKEKMPTSILKHTNIEGEQQTENEAGRQFNRKEAEPQPTNK
QSQIQLNQKEEELVTKKEAELQTPNKESRLQLNRNEAELQLPNKEPQTQVTKKEAELPPA
NKQSQLQFNRREEELVNKKEVELQTPNKESRMQLNRKEEELQLAKQEIKVQQTKKEPEIE
EHGAAEDKGRLQRKPELQFSASVEEKALRTSQDVGFWEGEEAEESLTVEEMIKRNRYYED
EDDDEEEVAIV
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggcgccgttcagccggaaacagtgggcttcacagtctttacgcatcacagcc
aaagagctctcgttggttgggacccgcggaaagagcaatgccatcagcgaacgcttttcc
aaatatcagagagctgctgaggaggcaagtgcagacaagaaaaaacctcctgttgacagt
ttgcctctgtcggtgcgttcggggaacctgagtgtgctgaggaaacgctgggaacaggag
aaacccccagcgcacctgagcgtggcacctggaagtctgagggctccgtctgtgtccagt
aaacccaatggtcctacacaaccacctgctttatcagccaaacccagcgttcctccacaa
ccaacatccagcaaacccagcagtctttcaaaaccttccacttcatccagcagtcctcca
gaaacattaacatcatccattaaacccaacagtcctccacaacctctcagtttatccagc
aagcccattgattcttcaaaacctcctacttcatctatcaaacccattgattctccagaa
ctttctacttcgtccaagaaacccattgattctccagaacatcctacttcatccaagaaa
cccattgattctccagaactttctacttcatccaagaaacccattgattctccagaacta
acttcatcgaagcaacccgttgattctccaaaacctccaacttcatccagaagtcctcca
gaaacattaacttcatccagcaaaccctttgattcttcaaaacctcctacttcatctatc
aaacccattgattctccagaacctacttcatccaagaaacccattgattcttcaaaacct
cctacttcatccacaaaacccattgattctccagaacttcctactttatccaagaaaccc
attgattctccaaaacctcctacttcatccagcactcctccagaaatattaacttcatcc
agcaaacccattgaatctcctgaacttactttatccaagaaacccattgattctccaaaa
cctcctacttcatccagcactcctccagaaatattaacttcatccagcaaacccattgaa
tctcctgaacttactttatccaagaaacccattgattctccaaaaccttcaacttcatcc
agaagtcctccagaaacattaacttcatccagcaaacccattgattcttcaaaacctcct
acctcatccaccaaacccatcgattctccagaacttcctactttatccaagaaacccctt
gattctccaaaaccacctacttcatccaccaaacccagcagtctttcagaacatcctttt
tcatccagcaatcctccagaaccttcatcttcatccaccaaacccaagaatcctccacaa
gcaccgtctcccaccaaacccatgccacaggccagcgtgagcgtggaggcgacggctcac
gagagaccagaaaacacaagggtggaaatggagactaaacacaagaggcaggtagaagag
aggaaagacatggagagttcatcagagccgatgtctcctctggagaaaccagccgtgccg
ctcaacaacctcaagatgatgtttgaaaagggcaacagcaaggtgcacacagatgctaac
ggcagctcagaggatggggacacactgaaggccagcaaaggcacatcccctttaaaacgc
accggctccattaaagatagattgaccagatatcagctagcagtctgcaagcaggcctca
gtctcccgctcggccagccaatcggaagcagatgacagtgttttctgcgctgatagcaag
gagatggcgccatctgctggtcatgggcgcacattgagcaaagtccctggaacaaacatc
gcaaatatcaatggagagtatgtaaacgcatcaagtcccggcactgaaactcttttatca
gagaacaaagagtttcataaggtcaccaagccatttcaagtggccgtcccggacagatgt
gtgtcctgccagcagactgtttaccagctggaaagactagttgccaatcagcagatttat
cacaaaaagtgcttccgctgtgccgtctgtagcaccaaactcagtttggcagcgtttgct
tccctgcatggcagcatctactgtaagcctcacttcaaccagctcttcaagtctaaaggc
aactacgacgaaggctttggccacaaacaacacaaggaaatgtggtctccacgaacaagc
caggaggaaccggaggaaaactccaactctgtgtcagtgaagcctgtagaaaaagcagag
gagtcgcacagaggggccaaattcacagagcagaccccaattatagagtccagaagtcaa
acagaaagacctcaaagcacgtctgcggaaaccaggaaactgagagtcgcatggcctccc
cctgcagacagtgatggaggagccaaagtctccagtccagctgaagtcagcaagggtccg
tccaggtttttcagagcaaagtggcccccggaggatgagtctccatcttctcagcagagc
acggaaagagcggagctgaaaaccctacggagaagcacatctctcagagagcgcagtcgg
ccattttccctagcgccaagcttgagctccaacccttcaaaacaagacgcgcaatccgca
ccaaaggcggtccgacgaggctcgctggaggacctgcgctctaggtcaacggctaaaact
gaggaaaaaatccctgacgcgaagacgaaggaggacgacggccaatccaagatcgagaag
aaggaaaagatgccaacttcaattctcaaacacacgaacatagagggagaacaacagaca
gaaaatgaggctgggagacagttcaacaggaaggaggcggagccacaaccaacaaataag
cagtctcagatacaattaaatcaaaaggaggaggagttagtgaccaaaaaggaggcggag
ctacaaacaccaaataaagagtctcggctacagttaaacagaaatgaggcggagctacag
ctaccaaataaggagcctcagacacaagtgaccaaaaaggaggcggagctaccaccagca
aataagcagtctcagttacaattcaacagaagggaggaggagctagtgaacaaaaaggag
gtggagcttcaaacaccaaataaggagtctcggatgcaattaaacagaaaggaggaggag
ctacaactagctaaacaggaaattaaagtacaacaaacaaaaaaggagcctgagatagaa
gaacacggagctgctgaggataagggaagactgcaaaggaaacctgagctccagttttct
gcgtctgtggaggaaaaagccctcaggacgtcccaggatgtggggttttgggagggtgag
gaggctgaggagtcactgaccgtggaggaaatgatcaagaggaaccgctactatgaagat
gaagatgacgatgaagaagaagtggcaatagtttga
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