Danio rerio (zebrafish): 108449885
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Entry
108449885 CDS
T01004
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
108449885 (npas4l)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108449885 (npas4l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS_4
PAS
HLH
Pentapeptide_4
Pentapeptide
Motif
Other DBs
NCBI-GeneID:
108449885
NCBI-ProteinID:
NP_001316841
ZFIN:
ZDB-GENE-070117-2515
Ensembl:
ENSDARG00000116511
UniProt:
P0DOC7
LinkDB
All DBs
Position
13:52006945..52014610
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AA seq
647 aa
AA seq
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MSCGDSGIRRILRASKRFRSTKGASKARRDQMNSEIRNLRALLPISPEHRLSYLHSMSIT
CTYIRKSVELRGVCEESTVFSAVNGCVPQDCALQDCALQECVLQECVLQECVLQECVLQA
LPGFIVAFTTDGKLLYVSENVHEYLGLSMVDVLQSDSFFDMLDRSDVEAVRSVLADASPS
GERWVVCRMLVSKAMRLRSSCCPLLVRIRLRDGVCVSLCRPTADRLPARNADFHTHHSAD
MRLASASSSVLFHLGFSADELIGRSWYELLHPDDLRHAADRHAAILAAATADAEMLIRVQ
CKDLSWVWMYTHASATAERDAISCSNYMISEAEAVYLQQRLSSSSSSSTSSSSSSASPQC
SSVSDSSDAHSAHTLFCTPPYSPTSSQCSDFLSEGYGSLEALVDSAFCSPPYPPLFPNPC
CTPTVCPPDTALDPARLCPPDSALVPAALCPPDAALDPTQLCPPGAALDPTLLCPPGAAL
DPTQLCLPDGALVPAVFCPPNGALVPARLCPSDAALVPAALGRPDAALVPVCRPLQVCEC
PLDGAVPLEDLSMFPLPQGGGSRLMPPEASPTTHTHFSYDAAQQAGIGTLAMQIHTLICS
FDAYSAARHTHSHHTSCWAPEPLLDEGIIDSILRELDSTHTDAHTLI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcggagactcgggcatcaggaggatcctccgcgcgtccaagcgcttcaggtcc
accaaaggagcatctaaggcgcggcgtgatcagatgaacagtgagatacggaacctgcga
gcgctgctgcccatcagcccagagcacagactctcatacctgcacagcatgagcatcacc
tgcacctacatcaggaagagtgtggagctgagaggtgtgtgtgaggaatccacagttttt
tctgccgtgaatggatgtgtcccgcaggactgtgctctacaggactgtgctctacaggag
tgtgttctgcaggagtgtgttctgcaggagtgtgttctgcaggagtgtgttctgcaggct
ctgccggggtttatcgttgcctttaccacagatggaaaactgctgtatgtgtctgagaac
gtacacgagtatctgggtctgtccatggtggacgttctccagagcgactctttcttcgat
atgctggaccgcagtgatgtggaggcggtgaggagtgtgttagctgacgccagtccttca
ggagagcggtgggttgtgtgtcgtatgctggtgtctaaagcgatgcgtctgcggagctcc
tgctgccccctgctggtgcggatccgtctgcgggacggagtgtgtgtgtcgctctgcaga
cccaccgctgaccggctgccggcgcgcaacgctgacttccacacacaccacagcgcagac
atgaggctcgccagcgcatcctccagtgtgttgttccacctgggcttctcagcggacgag
ctgattggtcgatcctggtacgagctcctgcaccccgacgacctccgacacgctgctgac
cgccacgccgcaatccttgcagccgccacagcagacgcagagatgctgatccgggttcag
tgtaaggatctgtcctgggtgtggatgtacacacacgcatcagcaacagcagagcgggac
gcgatcagctgctccaactacatgatcagtgaagcagaggcagtgtatctgcagcagaga
ctctcctcctcctcctcctcctccacctcctcctcctcctcctctgcctctcctcagtgt
agctccgtctcggacagcagtgatgcccacagcgcacacacactcttctgcacgccgccc
tacagccccacttcctctcagtgctctgacttcctgtctgaaggttatggctctctggag
gcgctggtggattctgccttctgctctccgccgtacccgccgctgttccccaacccatgc
tgcacccccactgtctgcccaccggacactgccctggaccccgctcggctctgcccgcca
gattctgccctggtccccgctgcgctctgtccgccggacgctgccctggaccccactcag
ctctgcccgccgggagctgccctggaccccactctgctctgcccgccgggagctgccctg
gaccccactcagctctgcctgccggacggtgccttggtccctgctgtgttctgcccgccg
aacggtgccctggtccctgcccggctctgcccgtcagatgctgccctggtccccgctgca
ctcggtcggccggacgctgccctggtgcctgtgtgtcggccactgcaggtgtgtgagtgc
cctctggatggcgctgtgccgctggaggacctcagcatgttcccgctgccgcagggcgga
ggctctcgtctgatgccgcctgaagcatcacccactacccacacacacttctcgtatgat
gcagcacagcaggcggggatcggcacgttggcaatgcagatacacacactcatctgcagc
ttcgatgcgtacagcgccgcacgacacacacactctcaccacacctcctgctgggcacca
gagccactgctggacgagggcatcatcgacagcatcctcagagagctggacagcacacac
actgatgcacacacactgatctag
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