Danio rerio (zebrafish): 137489032
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Entry
137489032 CDS
T01004
Symbol
crocc
Name
(RefSeq) rootletin isoform X1
Organism
dre
Danio rerio (zebrafish)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CCDC39
CEP135_TSGA10_CC
FKBP15
Rod_CreS
CENP-F_leu_zip
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
137489032
NCBI-ProteinID:
XP_073792934
ZFIN:
ZDB-GENE-121025-1
UniProt:
A0AC58IFC2
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Position
22:complement(276457..308229)
Genome browser
AA seq
2011 aa
AA seq
DB search
MSACGAAGESKLEAVIQRLEDSVLAEEKRLTVRGSAPDEAPVSLPARVREIVSRNLSPDA
VMSSGLSLQEENHLLQSELSRVEDLLAHSRAERDELAIKYSAVSERLEQALRLDAGADGC
EAADSGSLAQQNVELRRRLEEEQAAYKRKLTAYQEGQQRQAALVQKLQAKVLQYKKKCGD
LEQALLEKSNGGCDGSSNGHRRDEDEPSSDLESTLIRLEEEQQRSSALSAVNAMLREQLE
QAGLANEALSQDIRRLTADWTKAREELEQKESDWRREEESFHSYFSSEHSRLLALWRQVV
NLRRHACELKSATDRELSAVRGELACVSQSVQLQCVSVCAALRSGERDGSAVLLERETAV
RTQLEQQLRDTVTEMINLQTRRDAETTEINTRLVDAVREQERLRARMEDREQEVTTLNRK
LQEQKSLEEAEVNSLRTHTAALQNTLRDITQLLCSASEAVDTHTEECLLPLLRSSSSSSL
PIMPDSCLTALRSAVNNRIIQTQELHERLQAAQSLVQQLRRQQGEAESQLREAELRSQTL
QRERDEAERERETAERERQRLQQERDTLCSEKHAADTAAQAEHTHTQLLQMESERLQVCV
SSAQREREHLRDERDAALQERERARAHTQRIQQMWEESESRASALRAELAALRESVQQGA
TERLMMDTHNTQLKDTLARSESSQAELSIMITKLRSEESTLRDSLAKMSSINESLAQDKA
QLNSVIAQLEEERGGLLSRQREAELEKLTIRDELVRSEQDRLELDSARLALHQSLQEMEL
ARAGLETELQTAQADRVKLQDRITQLIGQVSGLEAELASLRGEGERQSAALEEVGQGRAE
LVRERAGLLVQLTASERENASLTEELAAFRTEREALETSLFELQQQINLMESQREQQESE
NQSLRLRTDTITGELKRLRAEREQVVCEMEKQKEALKDALSAVQQEAQRAQRTALSDHQE
ELQRLANQKEALRCSLEAEHQGALRRLQEHQEEQRSRLQEERDRLQEELRCLQRDCDQRL
LQAETDKQQALSVKDLEAAVLSEKLSTLQAELSTAAVELEKLNRETAAFKDQERAVVASL
KAEVQDLRSQLQDAAAAHGRELRRLQENCGDQQTRADAALTELEECRALLSSVEESRDAA
RRELLEAETRFCQIRDAGEGHKREEAELRRSLSDVTKERDALSQSNSQLREALRAAETER
ISVKRVCEEQQQKLCVLEECVSSAQTEVSELRSCLREVEKSRLEARREMQELRRQLKALD
SECVQQQQQCGDLQARVCVEQQKQQQCSRELITVKQKLADADTATHTLQKELSLLQRRLA
ESEACLRSRERELASQLQEASGAQQKLQDEVCKLSVRSQTAADAAAQVQLELSAAQGRLA
ATEAELSRAEAGRRDLEFRLSSLQSTLTRTLGIGASGRSSSRGRSPTGSSPSSLTSGMMS
RHRSVSPLRCSLSPPKDVANHVSPDSSMMLRPLSPERSDAPLPVALPDLEPQELRSRLRE
FLLELREAQRERDEVRGQLGSLQGELQEVTGERDSAHERLTQLHNTLQECQEEKRAADAK
LSSAEAQLQERDECMRRAERERRALTERISELERLLLNTDTERKRVEEQCSQLRAGEARL
EAERRRLWEALEAAEGRGTRVELGRRSLEGELQRIRRSLAEKEAEIQTAHQKLDSATKQV
SEAELRVSCLQREQERLTLQLSKAQDGERLLQERVLSLSHSLQEATDAHSATHSRLTALQ
KSLSQAEGERRQLQERVDALRASAADGKRSTDSLTERVQTLQTELKQSQQSRADLETQLH
STQQALRVRSETLAAAQLGLQAAQIDRSAAEERLRSLQRAVALLETEKRDAERQAVRMEK
DRAALRSTLDKVERQKLQTEESSVRLSVEKSRLDRSLNSTEQELQDAHTQITLLQEELVG
IRQRIGVCQAQLVEMEQSHCGCEHQSRQQEEAEREAERLRVSQREAERTLAARERAHRQR
VRGLEEQLNTLKEQLQQEIRRRSPALPPALS
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtgtggagctgcgggagagtccaagctcgaggctgtgattcagaggctggag
gacagtgttctggccgaggagaagcggctgacggttcgaggttctgctccagatgaggct
ccggttagtttaccggcgcgcgtgcgcgagatcgtgtcccgaaacctgagtcctgacgcc
gtcatgtcgtcaggtctgtctctgcaggaggagaatcatcttctccagagtgagttgagt
cgagtggaggatctgctggcacacagtcgagcagagcgggacgagctggccatcaaatac
agcgccgtcagcgagagactggagcaggctctgcgtctggatgcgggtgcagacggctgt
gaggctgcagactctggcagtctggcgcagcagaatgtggagctgcggcggcgtctggag
gaggagcaggcggcgtacaaacgcaaactcacggcctatcaggagggccagcagagacag
gcagcgctcgtgcagaaactacaggccaaggttctccagtacaagaagaagtgtggagat
cttgagcaggcgctgctggagaaatccaatgggggctgtgacggcagcagtaatgggcac
cggcgcgacgaggacgagccaagcagtgacctggagagcaccctcatccggctggaggag
gaacagcaaagaagtagcgctctgtctgccgttaatgctatgctacgtgagcagctggaa
caggccggactggccaatgaggcactcagccaggacatccgcagactcactgctgattgg
accaaagcgagggaagagctggagcagaaggagtctgattggaggagagaggaggagtcg
ttccacagctacttcagcagtgagcacagccgtctgctggcactctggaggcaggtggtg
aatctgcgcagacacgcctgtgagctgaagagcgccaccgacagggagctgtctgcggtg
cgcggcgagctggcgtgtgtgtcccagagtgtgcagctgcagtgtgtgagtgtgtgtgca
gcgctgcgcagtggagagagagacgggtctgcagtgctgctggagagagagacggctgtg
cggacacagctggagcagcagctcagagacacggtgacagagatgatcaacctgcagacc
cggagagacgccgagacgacagagatcaacacacggcttgtggacgcggtgcgagagcag
gagcgcctcagagctcgcatggaggacagagaacaggaagtcacaacacttaacaggaaa
ctgcaggaacagaagagtcttgaggaggctgaagttaattcactgaggacacacactgca
gcactgcagaacacactcagagacatcacacagctgctgtgctctgccagtgaggctgtg
gacacacacactgaggagtgtctgctgccgctgctgcgctcttcatcatcatcatcatta
cccatcatgcctgacagctgtctgactgcactgcgctctgctgtcaacaacaggatcatc
cagacacaggaactgcatgagcgtctgcaggctgcgcagtcattggttcagcagctgcgc
aggcagcagggggaggcggagtcacagctgcgggaggcggagctccgctcacagaccctg
cagagagagagagatgaggcagagcgagagagagagacggcggagagagagagacagcgg
ctgcagcaggagagagacacactctgcagtgagaagcatgcggcagacacagcggcgcag
gcggagcacacacacacacagctgctgcagatggagagcgagagactgcaggtgtgtgtg
tcatctgcgcagagagagagggaacacctgcgggacgagcgagacgcagcgctgcaggag
agagagagagcccgcgcacacacccagcgcattcagcagatgtgggaggagtcagagagt
cgtgcgtctgcactgcgggcggagctggcggcgctgagagagagcgtgcagcagggggcg
acagagagactcatgatggacacacacaacacacaactgaaggacacactcgccaggagc
gagagcagtcaggctgaactctccatcatgatcacgaagcttcgttcggaggagtcgact
ctcagagattcactcgctaagatgagcagcatcaacgagagtctggcgcaggacaaagcc
cagctcaacagcgtcatcgcgcagctggaggaggagaggggcgggctgctgagccggcag
agggaggcggagttagagaagctgaccatcagggatgagctggtgcgctccgagcaggac
cgcctggagctggactccgcccgcctcgctctccaccaatcactgcaggagatggagctg
gccagggcggggctggagacggagcttcagacggcgcaggctgacagagtcaagctgcag
gacagaattacacagctgattggccaagtgtctggtttggaggcggagcttgcctccctc
cgcggtgaaggagagcggcagagtgctgctcttgaggaggtggggcaagggagggcggag
ctagtgcgggagagggcgggacttctggttcagctgaccgcatcagaacgagagaacgcc
agtctgacggaggagctcgcagccttcaggacggagagggaggctctagagaccagtctg
ttcgagctccagcagcagattaatctgatggagtctcagcgtgaacagcaggagtctgaa
aaccagagcctgagactgcgcacagacaccatcacaggggagctgaagcgtctgcgtgct
gaaagagagcaggtcgtgtgtgagatggagaagcagaaggaggctctgaaagatgcgctg
tcagccgtgcagcaggaggcgcagcgagcccagcgcaccgccctgtctgaccaccaggag
gagctgcagcggctggccaatcagaaggaggcgctgcgctgcagtctggaggccgagcac
cagggggcgctgcggcggctgcaggagcaccaggaggagcagagaagccggctgcaggag
gagcgagaccggctgcaggaggagcttcggtgtctgcagcgcgactgcgaccagagactc
ctacaggcggagacagacaaacagcaggctctgtctgtgaaagacctggaggcggcggtg
ctgtcggagaagctgagcactctgcaggcggagctgagtactgcagcagtggagctggag
aagctgaaccgagagacggcggcgtttaaagaccaggagcgggctgtggttgcgtctctg
aaggctgaagtgcaggatttgcgcagtcagctgcaggacgccgcggctgcacacggccga
gagctgcgcagactgcaggagaactgcggagaccagcagacgcgagccgacgccgcactc
acagagttggaggagtgtcgcgcgctcctgtcatccgtggaggagagccgagacgccgcc
agacgagagctgctggaggcggagacacgtttctgccagatacgagatgcaggggagggg
cataaacgagaagaggcggagctacggcgctccctcagtgatgtcaccaaggagagggac
gctctcagccaatcaaacagccagctgagggaagccctgagagcagcagagactgagaga
atcagtgtgaagcgtgtgtgtgaggagcagcagcagaagctgtgtgtgctggaggagtgt
gtgtcgtctgcgcagacggaggtgtcggagctgcgcagctgcctgcgggaggtggagaag
tccagactggaggcccgtagggagatgcaggagctgcgcagacagctgaaggctctggac
agtgagtgtgtgcagcagcagcagcagtgcggggatctccaggcgcgtgtgtgtgtggag
cagcagaagcagcagcagtgcagtcgagagctgatcacagtaaagcagaaactcgcagac
gcagacaccgccacacacacactgcagaaagagctgtcgctcctgcagcggcgtctggcc
gagagcgaggcgtgtttgcgcagtcgtgagcgtgagctagcgtcacagctacaggaggct
agcggcgcgcagcagaagctccaggacgaggtgtgtaagctgagcgtgcgctcacagacg
gctgcagacgcggctgcacaggtgcagctggagctcagtgcggcacagggtcgactggca
gccacggaggcggagctttcacgagcggaggcggggcgtcgtgacctggagttccgcctt
tccagtctgcagtcgacgctcactcgtacgctaggcatcggcgccagtgggcggagcagc
agcagagggcggagtcccacaggctcctccccttcctctttgacctcagggatgatgtct
cgccatcggagcgtgtctccgctgcgctgctcactatcgccacctaaagatgtggccaat
cacgtgtctcctgatagctccatgatgctgcggccgctgtctccagagcgcagtgatgcc
ccgctgcccgtcgccctgcccgacctggagccgcaggagctgcgcagccgtctgagggag
ttcctgctggagctgcgggaggcacagagggaacgggacgaggtgaggggtcagctgggg
tcactgcagggggagttacaggaagtgacaggagagagagactccgcccacgagcgcctc
actcagctgcacaacacactgcaggaatgccaagaggagaagcgtgcagcggatgctaag
ctgtcgtcggctgaagcgcagctgcaggagcgtgacgagtgtatgcggagagcagagcgg
gagcggcgagcgctaaccgagcgaatctcagagctggagcggctattgctaaacaccgac
accgagcgcaagcgtgtggaggagcagtgcagtcagctgcgcgcgggagaggcgcggctg
gaggcggagcggcggcggctgtgggaggcgctggaggctgcagaggggcggggcacacgg
gtggagctggggaggaggagtctagagggagagctgcagcgaatcagacggagtctggct
gagaaggaggcggagattcagacggcacaccagaaactcgacagcgccaccaaacaggtg
tcggaggcggagctgcgcgtctcctgtctgcagcgggagcaggagcgtctgactctgcag
ctgtcgaaagctcaggatggggagcgtctgctgcaggagcgagtgctgtctctctctcac
agcctgcaggaggccacagacgctcacagcgccacccacagccgtctcactgcactgcag
aagagcctgagccaggcggagggagagcgcagacagctgcaggagcgtgtagatgcactc
agagcctctgctgcagacgggaagcgcagtacagactccctcactgagcgcgtgcagacg
ctgcagacggagctgaagcagagccagcagagcagagcagatctggagacgcagctgcac
agcacacagcaggctctgcgtgtgcgctccgagactctggccgcggctcagctcggtctc
caggctgcgcagatagacaggtcggctgctgaggagcgtctgcgcagtcttcagagagct
gtcgccctgctggagaccgagaagagggatgcagagagacaggctgtgaggatggagaaa
gacagggcggcactcaggagcacactggacaaggtggagcgtcagaagctgcagacggag
gagagcagtgttcgtctgagtgtggagaagagtcgcctggaccgatcactcaacagcaca
gagcaggagctgcaggacgcacacacacagatcacactgctgcaggaagagttagtcggc
atcaggcagaggatcggtgtgtgtcaggctcagctggtggagatggagcagagtcactgc
ggctgcgagcaccagagccgtcagcaggaggaggcggagcgggaggcggagcgactgcgg
gtcagccagagagaggcggagcgcacgctagcggcccgcgagagagcacaccggcagcgg
gtcagaggtctggaggagcagctcaacaccctgaaggagcagctgcagcaggagatccgg
aggaggagtccggcactgccccctgcgctcagctga
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