Danio rerio (zebrafish): 140423
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Entry
140423 CDS
T01004
Symbol
jag1b
Name
(RefSeq) protein jagged-1b precursor
KO
K06052
jagged-1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04330
Notch signaling pathway
dre04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
140423 (jag1b)
04371 Apelin signaling pathway
140423 (jag1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
dre04090
]
140423 (jag1b)
CD molecules [BR:
dre04090
]
Proteins
140423 (jag1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_2
DSL
EGF_DL_JAG
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
EGF_3
cEGF
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
140423
NCBI-ProteinID:
NP_571938
ZFIN:
ZDB-GENE-011128-4
Ensembl:
ENSDARG00000013168
UniProt:
F1R986
LinkDB
All DBs
Position
13:38798490..38849400
Genome browser
AA seq
1213 aa
AA seq
DB search
MILRRSSVFSAFYLHAFLLCLRTTVSDASGHFELEILSMQNANGELQNGACCDGARNPAD
RKCTRDECDTYFKVCLKEYQSRVSSAGACSFGTGSTPVLGGNKFSTKGTRSEKSRIVLPF
SFAWPRSYTLIVEALDFNNETASESGKLIEKAYHSGMINPNRQWQRLTHNGPVAQFEYQI
RVTCLEHYYGFGCNKFCRPRDEFFGHYTCDQNGNKTCLEGWTGPDCNTAICRQGCSTEHG
SCKQPGGCKCLYGWQGPYCDKCIPHPGCVHGTCVEPWQCLCDTNWGGQLCDKDLNYCGTH
QPCLNGGTCSNTGPDKYQCSCEDGYSGVNCERAEHACLSNPCANGGTCKETSQGYECHCA
IGWSGTSCEINVDDCTPNQCKHGGTCQDLVNGFKCACPPHWTGKTCQIDANECEDKPCVN
AKSCHNLIGAYFCECLPGWSGQNCDININDCKGQCLNGGTCKDLVNGYRCLCPPGYTGEQ
CEKDVDECASSPCLNGGRCQDEVNGFQCLCPAGFSGQLCQLDIDYCKPNPCQNGAQCFNL
ASDYFCKCPDDYEGKNCSHLKDHCRTTSCQVIDSCTVAVASNSTPEGVRYISSNVCGPHG
RCRSQAGGQFTCECQEGFRGTYCHENINDCESNPCRNGGTCIDKVNVYQCICADGWEGVH
CEINIDDCSLNPCLNKGACQDLVNDFYCECRNGWKGKTCHSRDSQCDEATCNNGGTCHDE
GDTFKCRCSPGWEGATCNIAKNSSCLPNPCENGGTCVVNGDSFNCVCKEGWEGSTCTENT
NDCNPHPCYNSGTCVDGENWYRCECAPGFAGPDCRININECQSSPCAFGSTCVDEINGYR
CLCPPGRIGPDCQEVVGRPCIANGQVTADGAKWEEDCNICQCQNGRIHCTMMWCGPKSCR
TGKARGGCPASQSCVPIKEEQCFVKPCPSLGECWPSAPPPPSKCHASFSYQDDSCANITF
TFNKENMPQGLSVEHVCNELRHWYLLKNLSTEYAVSISCEPSSSASNEIHISISTEEPRT
DRSPIKDITVQIIDLVSKHNGNSTIIKAITGVRVHQIPSPKTDYLVPLLSSIFIVLWIFA
LASAFLWCIHRRRKQNTHSNTATSATEDNTTNNVREQLNQIKNPIEKHAAHGVPIKDYEG
KNSIIAKIRTHNSEVEEEDMDKHLQKARFTKQPAYTLVEREERAPNKNPNWTNKQDNRDL
ETAQSLNRMEYIV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgattctgcgacggagttcagtattttctgctttttaccttcatgcctttttgttatgc
ttgcggacgacggtgtctgacgcatcggggcacttcgagctggaaatcttatcgatgcag
aacgcgaacggcgagctgcagaacggcgcgtgctgcgacggcgcgaggaacccggcggat
cgcaaatgcacgcgggacgaatgtgatacatattttaaagtttgtctaaaggaatatcaa
tcgcgagtttcctcggctggggcttgcagtttcggaactggatctacgcccgttctcggt
gggaataaattttcgaccaagggaacgcgcagtgaaaagtcaaggattgttttacccttc
agttttgcgtggccgaggtcctacacgttgatagtggaggccttggacttcaataatgag
accgccagtgaaagtggaaagctcatcgagaaagcgtaccactctggcatgatcaaccca
aatcgacaatggcagaggctcacccataatggccccgtcgcccagtttgagtaccaaatc
cgggtgacctgccttgaacactactacggcttcgggtgcaacaagttctgccggccacgt
gacgagttctttggacattatacctgtgatcagaatggaaacaagacctgtttggaagga
tggacgggtcctgactgcaacacagcgatctgcagacaaggctgcagcaccgaacacgga
tcatgcaagcaaccaggcggctgcaagtgtctgtatggctggcagggtccatactgtgat
aaatgcatccctcacccgggctgtgtacatggaacctgcgttgaaccctggcagtgtctc
tgtgacactaactggggcggacaactctgtgacaaagatctaaactactgtggaactcac
cagccatgtctgaatggaggaacgtgcagcaacacagggcctgacaagtaccagtgctct
tgtgaagacggatactcgggcgtcaactgtgaacgagctgaacacgcctgtctatccaac
ccatgtgcaaatggagggacgtgcaaggagaccagccaggggtacgaatgtcactgtgca
atcggctggagtggcacatcctgtgaaatcaatgtggacgactgtacacctaaccagtgc
aaacatggaggcacatgtcaagatttggtcaatggctttaaatgtgcctgccctcctcac
tggactggcaaaacatgtcaaattgatgccaatgaatgtgaggacaagccatgtgtgaac
gctaagtcatgccacaatttgattggtgcatatttctgtgagtgtctccctggatggtca
ggtcaaaattgtgatataaacataaatgactgtaagggtcagtgtttgaatggaggaact
tgcaaggatttggtgaatggataccggtgtctatgccctcctggttacactggtgaacag
tgtgagaaggatgtggacgagtgcgctagcagcccctgtctgaatggtgggcggtgtcag
gatgaagttaacggatttcagtgcctgtgtcctgctggcttttcgggtcaactgtgtcag
ttggatatcgattactgcaagcccaacccatgtcaaaacggcgcgcagtgtttcaacctg
gcctccgactacttctgcaaatgtcctgacgactacgagggcaaaaactgctctcatctg
aaggaccactgtcgaaccacatcatgccaagtgattgacagctgcacagtcgcagtggcg
tccaacagtacaccggaaggagtgcgatacatctcttcaaatgtctgtgggcctcatgga
cgctgcaggagccaagctggaggccagtttacatgcgagtgtcaagaaggattcagagga
acctactgccacgagaacattaacgattgtgaaagtaacccatgtcgcaatggtgggacc
tgcatcgacaaagtgaacgtttatcagtgcatttgtgctgacggttgggaaggagttcac
tgcgaaatcaacatagatgactgcagcttgaacccttgcctgaacaagggagcatgtcaa
gacctggtgaacgatttctattgcgaatgtagaaatggctggaagggaaaaacctgccac
tcccgtgatagccagtgtgacgaagctacatgcaacaatggaggtacatgccatgatgaa
ggggacaccttcaaatgcagatgctcacctggctgggagggagccacatgtaacatagcc
aagaacagcagctgtttgcccaacccgtgtgagaacggaggcacctgtgtggtcaacggc
gactccttcaactgcgtctgcaaggaaggctgggaaggatccacctgcactgagaatacc
aacgactgcaacccacacccttgttacaacagtgggacatgtgtggatggtgaaaactgg
taccgttgcgagtgcgctccaggatttgccggaccagactgtcgcataaatataaatgag
tgtcagtcttctccctgcgcatttggctctacctgtgttgatgaaatcaatggttaccga
tgtctttgtccacctggaagaataggaccggattgtcaggaagttgtagggagaccctgc
attgctaatggacaagtaactgccgatggtgccaaatgggaagaagactgcaacatttgt
cagtgccaaaatggaaggattcattgcacaatgatgtggtgtggaccaaagtcatgtcgc
acaggaaaggccagaggtggatgtcctgcaagccaatcttgtgttcccatcaaggaagag
cagtgctttgtcaagccctgtcccagtctaggagagtgttggccctctgcaccccctcca
ccctctaaatgccacgccagcttctcttaccaggacgacagctgtgccaacatcacgttc
acctttaacaaggagaacatgcctcaaggcttgagtgtggaacatgtatgtaatgaactg
aggcactggtacctgctgaagaacctctcgacagaatacgcggtgtccatcagctgtgag
ccatcttcttcagccagcaatgagatccacatcagcatttccacagaggagcccaggaca
gacaggagtcctattaaagacataacggttcaaatcattgacttggtgagcaagcataat
ggaaacagcaccatcattaaagccatcaccggcgtacgggttcatcagataccaagcccc
aaaactgactacctggttcctttgctgagctccatcttcatcgtgctctggatcttcgct
ctggcctcggctttcctgtggtgcatccaccggcgccggaaacaaaacacccacagcaac
actgctacctcagccacagaggacaataccaccaataacgtgcgtgagcagctcaaccag
atcaaaaaccccatcgagaagcacgcagctcacggcgtgcccataaaagactacgagggc
aagaactccatcattgccaaaattaggacgcataactctgaggtggaggaagaggacatg
gacaaacacctgcagaaagcgcgcttcaccaagcagccggcctacacgctggtggagcga
gaagagcgcgcgccaaacaaaaacccaaactggactaacaaacaggacaacagagacttg
gagacggcacagagcttaaacaggatggagtatatcgtatag
DBGET
integrated database retrieval system
