Danio rerio (zebrafish): 141376742
Help
Entry
141376742 CDS
T01004
Name
(RefSeq) integrin alpha-X-like
KO
K06461
integrin alpha M
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04145
Phagosome
dre04514
Cell adhesion molecule (CAM) interaction
dre04517
IgSF CAM signaling
dre04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
141376742
04517 IgSF CAM signaling
141376742
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
141376742
09142 Cell motility
04810 Regulation of actin cytoskeleton
141376742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
141376742
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
141376742
04515 Cell adhesion molecules [BR:
dre04515
]
141376742
04090 CD molecules [BR:
dre04090
]
141376742
00536 Glycosaminoglycan binding proteins [BR:
dre00536
]
141376742
Membrane trafficking [BR:
dre04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
141376742
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141376742
Cell adhesion molecules [BR:
dre04515
]
Integrins
Integrin alpha subunits
141376742
CD molecules [BR:
dre04090
]
Proteins
141376742
Glycosaminoglycan binding proteins [BR:
dre00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
141376742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
141376742
NCBI-ProteinID:
XP_073774189
LinkDB
All DBs
Position
12:4633942..4656267
Genome browser
AA seq
1132 aa
AA seq
DB search
MMDWYSYISFCIFCVSQSVMAFNIDPASWKTFTGPSQSQNVAFGYKVIQKDTSSLIVSDP
LIQINQDKRGQIYNCEVAKGTCTQLNITVPSEAVNMSLGFSMVQHPQSSKLAICGPTIPK
NCTTATNYRGMCFIGNSGDFGPPIPKSKYRDCLGQIDIAFLLDGSGSIGIYDFTVMKGFV
TNVIRRFIERDAQFAIAQYSNDCDIHYNFNDLKLDDGTWESKVANIPYHEGGTFTASAIQ
KLVNYLFTPNGGTRPSAKKILVVITDGESHDRNLLKDAASQAEKNSIVRFAIGVGKAFDY
YNAREELNTIASDPDTDYVFKVTDFNALKNILQKLEGNIIAIEGTQTSGDSSRMEFAQDG
FSTAFTSSGSVLVSAVGAFQWKGGYRDNSQEGSFQTGSEHESYQGYSMAVATVSLTSFAI
LGAPRYQHRGQVTISRIGTNEVQPLDSPMPQIGSYFGAEVCVVDLNSDSYTDLLLVSAPT
YTESEREGKVFVYSFTSWSRLFFSDVVLVGMAGQRGRFGSSLASPADLNGDGYRDVLVGA
PLEEEGQGSIYIFNGRDGGIISSYSQRIAGSSVKSGLQYFGVSLSQSSPDQTADSLPDIA
AGSKGAVLLLRSRPIMLLETMVSYTPSKISTIQQDCLIPLQTTLTVCFTMKGYRHHRRGL
NAKIAYNITLDAKRQAYRAFFSAKERLLSDVIDIGSTEACNNHNFSIEACPEDALNPLSN
QLKFTFEGLPSSQMQNLRPILLPEIKTTSDHDLDFERECGEDNICVDDLRMDFNFSGSTN
IEVGIMQEINVTVFVENRGEDSYNPHLTLKYPYGFSFRRFTLKQGRVECSSLDGEQGVRL
GETECAISKPILKDNTTVVFEITYSINREVTLGQNVTFSASVKSGNDQHSNHSESFKEKS
IDVKYGIYVTLIRHENSTIYINFTSGKKDLSKHVQQTIKIENDLRPLAFTAFVRVPVKLG
DTNIWKNSTLQVSDCVNNTEEKPNSTNFMDVIKKHHVLNCSVAVCAVFSCDVNLIKNERK
LYNITGNVSSAWIEQTGLKRTMFELVSTTTMDYDMSTYVFFSSDSRNTAPSLQISTQVEV
YEEADLTKEIIGGVIGGLVLLALITAVMYKAGFFKSQYKKMLKEAKRDEAPR
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgatggattggtactcctatatcagtttttgcatcttctgtgtgtctcagtcggtcatg
gcttttaacatcgatcctgccagctggaaaactttcactggaccttcacagagccaaaat
gttgcctttggctacaaggtgatacagaaagacacatcaagtctgatcgtgagcgatcct
ttaattcaaatcaaccaggataaaagaggacaaatttataactgtgaggttgcaaaagga
acctgcacacaactgaacattaccgtgccctcagaagctgtcaacatgtctctgggattc
tccatggttcaacatccacaatcttcaaagctggcaatttgtggtcctaccattccaaag
aattgtacaacagctaccaactacagaggcatgtgctttattgggaacagtggggatttt
ggaccaccaatacccaaatccaaatacagagactgtcttggtcagattgacatagctttt
ctactggatggctctgggagtataggaatttatgattttacagtaatgaagggttttgtg
acaaacgtgatcagacgttttattgagcgggatgcacagtttgccattgcacagtactcc
aatgactgtgatattcactacaatttcaatgacctcaaattagatgacggcacctgggag
tctaaagtggcaaatattccatatcatgagggtggcacttttactgcatcagccatccaa
aagcttgtcaattacctcttcacaccaaatggagggacaaggccatcagcaaaaaaaatc
ttggttgttattactgatggagagtcacatgacagaaatttgttgaaagatgcagcatca
caggcagagaaaaacagcattgtccgattcgcaattggagttggcaaagcttttgattat
tacaacgcaagagaagagttgaatacaattgcttctgatccagacactgactatgtgttt
aaagtgacagacttcaatgcactgaaaaacattcttcaaaagttggaagggaacattatt
gcgattgaaggaacccagacttcaggagattcttccagaatggagtttgctcaggatgga
ttcagcacagctttcacatcatctggaagtgtgttagtgagtgctgttggagctttccag
tggaaaggtggataccgggacaattcccaagaaggctcctttcaaacaggcagtgagcac
gaaagctatcaaggttattcgatggctgttgcaacagtgtcattgaccagctttgctatt
ctaggagctccaagataccagcatagaggacaagtcactatttccagaatcggaaccaat
gaagttcaacctctggactctcctatgcctcagattggctcttattttggagctgaggtg
tgtgtggtggatttgaacagtgactcttatacagatctgcttctggtatcagcaccgaca
tacacagagtctgaacgagaggggaaagtgtttgtttatagtttcacatcttggtcaagg
ttatttttttctgatgtggtgctggtgggcatggccggtcagaggggtcgctttggctct
tctctagccagtccagcagatctgaatggtgatggttatagggatgtgctggttggtgct
ccattagaggaggaaggacagggcagcatctacatcttcaatggacgagatggagggatc
atttcatcatactcccagagaattgctggatcatctgtaaaatcaggattgcagtacttt
ggcgtttccttgagtcaatcctctccagaccagactgcagacagccttcctgacattgct
gctgggtccaaaggagcagttctgcttctcaggtccagacccatcatgctcttggaaaca
atggtttcttacaccccatccaaaatatcaaccattcaacaagactgcttaataccattg
cagaccactctgaccgtgtgcttcaccatgaaaggatacaggcatcacagaagaggtttg
aatgcaaaaattgcttacaacataaccctggatgctaaaagacaggcctatcgagcattc
ttctcagccaaagagcgtctcctcagtgatgtgattgacattggaagtacagaagcttgc
aataatcataatttctcaatagaggcttgtccagaagatgctctgaatccattgtccaat
cagttaaaattcacctttgagggtctgccatctagtcaaatgcaaaacctgaggccaata
ctgctgccagagataaagaccacctcagatcacgatctggattttgagagagaatgtgga
gaagataatatatgtgttgatgatctcagaatggatttcaatttctcgggatctactaat
atagaagtggggataatgcaggagatcaacgtgacggtgtttgtcgaaaacagaggagaa
gattcatacaacccacacctcaccctcaaatacccatatggattttcattcaggagattc
acattgaaacagggcagagtagagtgttcatctctggatggagagcaaggggttcgactg
ggagaaactgaatgcgccatcagtaaacccatcctcaaggataatacaacggttgtgttt
gagattacgtacagtatcaatagagaagttacactgggccaaaacgtgacattcagtgct
tcagtcaagagtgggaatgaccaacactcaaaccacagtgagtcattcaaagagaaaagc
attgatgtgaaatatggcatctacgtcacattgatccggcatgaaaattccaccatctac
attaactttacttcagggaagaaggatctttcaaaacatgtgcagcagacaataaagatt
gaaaatgacctcagaccattagctttcacagctttcgtcagagtaccagtgaaacttggt
gataccaacatctggaaaaattctactttgcaggtttctgactgtgtgaacaatacagag
gagaaacctaatagcacaaatttcatggacgttattaaaaaacatcatgtgctgaactgc
agtgtggcggtgtgtgccgtgttcagctgtgatgtgaacctcataaagaatgaaaggaag
ctctataatataactggcaatgtgagctctgcgtggattgagcagactggactcaaaagg
actatgtttgagctggtcagtacaaccactatggattatgacatgagcacatatgttttc
ttttcctcggattccagaaacacggcgccgtctttacagatcagcacacaagtagaagtg
tatgaggaggcggacctgacaaaggagatcattggaggagtgattggaggacttgtgctg
ctggctctcatcactgcagtcatgtataaggctgggttctttaaaagccagtacaagaag
atgctgaaggaggcaaaaagagatgaagcaccacgataa
DBGET
integrated database retrieval system
