Danio rerio (zebrafish): 141378043
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Entry
141378043 CDS
T01004
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141378043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
141378043
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141378043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
SOGA
Motif
Other DBs
NCBI-GeneID:
141378043
NCBI-ProteinID:
XP_073781022
LinkDB
All DBs
Position
2:complement(23851797..23889491)
Genome browser
AA seq
1909 aa
AA seq
DB search
MQKSMTSLCYKLEQAMKEVHRLQKETDEANKRALVLERDNQKSERQLADMSEQVRVLLVE
VEEARGNQVVREDVSSAVSSSSEVQGSRQVAFRSIQELQQQNQNLLVKIRDLEEQREKDQ
NQAKSAKQTELEQSLEKVQKELEQIKEQQNHQKLLAESAIRQRDMYRILLQTAGVELPPQ
GSDGGSQSTTPSRPGPMATRSTPLRAAAAESFQATQSKAALKQINDAFTTYKKEKAENDK
LLNEQIERLRGQVSDLLSQKAKLSSQLEFASKRYDMLQENVNGFRRETEALRERNQKMSA
THQRHEQIIHTMTQDLREANEKLTMSESRAENIRKERDILKQVENRLNQEKESILTEQRS
QNLLLTNLKSIQLTMERSETETKQRYNNQIQHLEKEIIQLKKRLEQEVEQRHALERNQDT
QLLEAKKKLESQTALHQKTKELLRSAEQQVTSLRQQLNNNENQNAAPKQPVRTLPRVSAP
SVPQQEADDLRARLQQVEEQNSDLKERLKNTTTNVEQYRSMVLSLEESVNKEKQLAEQAR
TSTDNQLKMARELNQQLEARLMEAEKEKLELQQEKMKAVDSVEERVKELKRSMTNMQTEL
QEALQRSTAAVTQEQKATQDSKVQAKLAAEAQNKYERELMLHAADVEALQAAKKQGQLLT
QNMKQLEEKAQKAASELHQYRTDWVMQEKRLKETLSKEQKRAEELQKQNTLLHEQMENLS
SKITASTQQETGESSLNISLNEEGKSHEQILDILRFVRREKEIAETRLEVAEVETLRYKQ
RMEYLECELKELQDSLNVEREKLQVTTKTLVQQEETMKRMESMSALTDTNKMLKNEKNRL
EHELQQTQAKMRKLEADIKPLQEANGELSEKSGMLQAEKRLLEEDVKRLKSRTQQLLNQQ
KDSDQEESKKLHSERETHLKRIQQLTEETGKLKNEVARSQASITTAQSQVQNLQDSLGKV
TTERDSLKKELEAKTLDIQEKVKTITQVKKIGRRYKTQYEELKEQHDKMVAEAASKPAQE
QEDRQASVQEIQNLKSSLSQTQNRTSELETQLDCIQKTLQEREAEVKSLQEQLTQVQPEL
SRLKAELQEKGKLEEQLRQQIADKEEKTKKAFLGAKQKLNQLNSAKEQLAKENEELKLQR
EELEVRMSALKSQYEGRLSRQERELRELREQQERHGEQRDEAQEPGQSKVQEAPRSSDAR
QITLKPTPAADRGSASQSEPPTANIKPTLVAATPSKPSPIAGSKSTPKASIRPMITPAPV
TTPTATVMPTTQVETQEALQSTEGPLEHVTVFGSTSGSVRSTSPNIQTTQPILSLQQSQA
TAFVQPTQQQASQEPATSIMEAVHSSQMERPSTSTAVFGTVSATTGSSVAKRVREEHEES
STEVTDTTQDDSTHPPIMKKLRIVRRVGLEDASGTEESNDAMGESSGDVQQPPDASEEAY
PVLGEGDEESLSAPMDQVSESQPSESQISGQDSSEEYKHDVIVIETDSATEEEEEEEEEQ
EEPGQYEDDDEDEDDDAEDEDDEDGDGGMAEAAEESNEGSGSADANEAYEGDEAEQGAGE
ADPSVHNEESQEASDSTQKQPDSQSSEASVSTLEAFPLEPVREHPPLPSTTTTSLAPRLP
QSPRRPHHTPPPRLNIHPVPELGPPIMQRQSGQSRRPSMSRAPQLTPGIGSMQHFFDDDD
RMVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMMPQASSSHSDLSHLATHGG
LGMYESPLFLPTHDEESGGRSVPTTPLQVAAPVTVFTESHPSDVSETASQSVPMVSTSTA
SLSAPGEAVPGDDGDDVFVAEAESEGVSSEACLESQLELDSAQPADDASLPSTSQEPTSS
SADTSTSSGQAKPAGRLLPQHHLPRRNQLIRRGFPRGGRGRGLSRGSPF
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtctatgaccagtctctgttataaactagagcaagctatgaaggaggtccat
cggctacaaaaagaaacggatgaagccaataagagagctttagtgcttgaaagagataat
cagaaatcagagagacagctagccgacatgtctgagcaggtgcgtgtgcttctggtggag
gtggaggaggcacgtggtaatcaggtagtgcgtgaggatgtgagttctgctgtgagcagt
agctctgaggtccagggttcacgacaggtggcattccgcagcatccaagagcttcagcag
cagaaccagaacttactggtcaagatcagagacctggaagagcagagagaaaaagaccag
aaccaggctaagagtgcaaagcaaacagaattggaacaaagtctggagaaggttcagaag
gagctggagcagatcaaggaacagcaaaaccatcagaagctgctggctgaatctgccatc
cgccagagagacatgtaccgtatccttttgcagacagccggagtcgagcttccaccacag
ggttcagatggtggatctcaatccactactcccagcaggccaggacccatggccactaga
tccacaccactaagggctgctgctgcagaatctttccaggcaacccagtctaaagcagca
cttaaacagataaatgatgcctttactacatataaaaaggagaaggccgaaaatgacaag
cttctaaatgagcagattgagaggcttcgtggtcaagtgtctgacctgctctcacaaaag
gccaaactgtcctctcagctggagtttgcctctaaacggtatgatatgcttcaggagaat
gtaaatggctttcgaagagagactgaagccctgcgggagaggaatcaaaagatgtctgcc
acccatcagagacatgagcaaatcattcacacaatgactcaagacctgagggaggccaat
gagaaactgaccatgtccgagtcgcgggctgaaaacatccgtaaggaacgagacattctg
aagcaggtggaaaacagactcaaccaggagaaagagtctatcctgactgaacagcggagc
cagaaccttctgctcaccaacctcaaatccattcagctcaccatggagcgctctgaaact
gagaccaaacagcgctacaataatcaaatccagcatctggaaaaggagatcatccagtta
aagaagaggctggagcaagaagtggaacagagacacgcactggaacgcaaccaagatact
cagctgttggaggctaagaagaagctggagtcacagaccgcactacaccagaagactaaa
gagctgctgagatctgctgaacagcaggtgacctctttgagacagcaactgaacaacaat
gagaatcagaatgcagcacctaagcagcctgtcaggacattacccagagtttcagctccc
agcgttcctcaacaggaggcagatgatcttcgtgcacgtctacagcaggtcgaggaacag
aactctgacctgaaagaacgcttgaagaacaccaccaccaatgtagagcagtatagatct
atggtgctcagcttggaggagtctgtgaacaaggagaaacagttggctgagcaagcacgg
acctccactgacaaccaactgaagatggctcgggagttgaatcagcagctggaagcccgt
ttgatggaagcggagaaggagaagttggagctccagcaggagaagatgaaagctgtggat
agtgttgaagaacgggtgaaggagctgaaaaggagcatgacaaatatgcagactgagctt
caggaagctctgcagagatctacagcagcagtcactcaggagcagaaagccacacaggac
agcaaagtacaggctaagctggctgcagaggctcagaataaatacgagcgagagctcatg
ctgcatgctgcagatgtggaagccctgcaggccgccaagaaacagggacagcttttaaca
caaaacatgaagcagctcgaggagaaagctcagaaagctgcatctgaactgcatcagtac
cgcacagactgggtaatgcaggagaagagactaaaggaaacgctttctaaagagcagaag
agagccgaggagctgcagaagcagaacactttgctccatgagcagatggagaacttgagc
agcaagatcactgcctcaacccagcaggagactggagagagcagtctgaacatctctctg
aacgaggagggcaagtctcatgagcagatactggacatcctcaggtttgtccggcgggag
aaggagattgcagagacccgactggaagtggccgaggtggagacccttcgctacaaacag
cgcatggagtatctggagtgcgagctgaaggaactacaggacagcctgaatgtagagaga
gagaagttgcaggtgacaacaaagaccttggtacagcaggaagagacgatgaagaggatg
gagagcatgagtgctcttacagataccaacaaaatgctgaaaaatgagaaaaatcgactg
gagcatgagctgcagcagactcaggccaagatgcgtaagctcgaagcagacatcaagcct
ctgcaggaggccaatggtgagctgagtgagaagagtggcatgttacaggctgagaagagg
cttctggaggaggatgtcaagcgcttgaagtctcgcacacagcaactcttgaatcagcag
aaggacagcgatcaggaggaaagcaagaagcttcattctgagagagagactcatcttaaa
cgcatccagcagctcacagaggagactggcaaactgaagaatgaggtggcccggagccaa
gcttcaatcaccacggctcagagccaagtgcagaacctgcaagacagtctggggaaggtc
accactgaacgagacagtctgaagaaggagctggaggcaaaaacactggacatccaggag
aaagtcaaaaccatcacgcaggtcaagaaaatcggccgtcgctacaaaacccagtatgaa
gagctcaaagaacagcatgataagatggtggcagaggctgcttctaaaccagcccaggag
caggaagaccgtcaggcctcagtgcaggagattcagaacctgaagagctcattgagtcag
acacagaatcgaacctcagagctggaaactcagctggactgcatacagaagacgttgcag
gagcgtgaagcagaggtgaagagcctacaggaacagctgacacaagtgcagcctgagctc
agccgtctaaaagcagaactgcaggagaagggcaaactggaggagcagctccgacagcag
atcgctgataaagaggagaagaccaagaaagccttcttgggggccaaacagaagctcaac
cagctcaacagtgcaaaggagcagctggcgaaagaaaacgaggagctgaagctgcagcga
gaggagctggaggtgaggatgagtgcactgaagtctcaatatgaaggtcgacttagccga
caagaacgagagctgagggaacttcgtgaacagcaggagagacatggagaacagagagat
gaagctcaggagcctggccagagcaaggttcaagaggcaccgaggtcatcagatgctcgt
cagatcacactcaagcctacgcctgctgctgacagaggaagtgcaagtcagtctgaacca
cccactgccaacatcaagcccacgttagttgccgccacccctagcaagccttcaccaatc
gcaggcagcaagtccactcctaaagcaagcatccgtccaatgataacgcctgctcctgtt
accacacccacagccacagtcatgcccaccacacaggttgaaacgcaggaagctctacaa
tccacagagggtccgctggagcatgtgactgtgtttggcagcaccagtggctcagtgcgc
tccaccagcccaaacatacagaccacacagccaatcctcagcctgcagcagagccaagcc
actgccttcgtccagcccactcagcagcaggccagccaggaaccagcaaccagcattatg
gaagcggtgcatagctctcagatggagaggccctccacctccaccgctgtctttggtaca
gtttctgcaacaacgggttcttcggtggccaagcgagtgcgagaggagcatgaggagagc
tccactgaggtgacggacaccacacaggatgactctacacatccacccatcatgaagaag
ctccgcattgtaagaagagtgggtctggaggatgcttcaggtactgaggagagtaatgat
gctatgggtgaatcttcaggagacgttcagcagcctcctgatgccagtgaggaagcctat
cccgtattaggagagggggatgaagaatcattgtctgcccccatggatcaggtgagtgag
tctcaaccctctgagtctcagatcagtggacaggactcatcagaagagtacaagcatgat
gtaatcgtcatcgaaacagacagcgccactgaggaggaggaggaagaggaagaggagcag
gaagaacctggacagtatgaagatgatgatgaggatgaggacgatgacgcagaagatgag
gatgatgaagatggggatggaggaatggctgaagcagcagaggagagtaatgaaggcagt
gggagtgcagatgccaatgaggcttatgagggggatgaggcagagcagggtgccggggaa
gctgatccaagtgttcacaatgaagagagtcaagaggcatctgattcaacccagaagcaa
ccagactctcagagcagtgaagctagtgtcagcaccctggaggccttccctcttgagcct
gtaagagagcacccgccgctgcccagcactaccaccacctccctcgccccgcgtctgccc
caatccccccgtagaccacatcacacccctccacctcgtcttaatatccaccctgtccct
gaacttggacctcctatcatgcagaggcagtctggacagagcagacgaccatcaatgagt
cgcgcaccgcagcttacgcccggtattggaagcatgcaacacttctttgatgacgatgac
agaatggttcccagcactcccactcttgtggtgccacaccgcacagatggctttgcggag
gccattcattcccctcaggtggctggagttcctcgcttccgtttcggccccccagaggac
atgatgcctcaggccagctcttctcattctgacctgagccatctggccacacatggagga
ctgggcatgtatgaaagtccactgttcctgcccactcatgatgaggagtctggaggcagg
agtgtgcccaccacccctctacaagtggccgctccagtgaccgtgttcaccgaaagtcac
ccgtcggatgtttcggagacggcctctcagtcagtgcccatggtaagcacatccaccgcc
agcctgagtgcaccaggagaggctgtgccaggagatgatggagatgacgtgttcgtggct
gaggctgagagcgaaggggtgagtagtgaagcgtgtctagaaagccagttggagctagat
tctgcacaaccggctgatgatgccagtcttccctccaccagtcaagagcctacgtctagt
tctgcagacactagcaccagtagcggtcaggctaaacccgcaggccgtctgcttcctcag
caccatctgccccggagaaaccagctgatccggagaggttttcctcgtggaggtcggggt
cgagggctcagcagaggctcccctttctaa
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integrated database retrieval system
