Danio rerio (zebrafish): 170784
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Entry
170784 CDS
T01004
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04120
Ubiquitin mediated proteolysis
dre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
170784 (ube4b)
04120 Ubiquitin mediated proteolysis
170784 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
170784 (ube4b)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
170784 (ube4b)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
U-box type E3
170784 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
170784
NCBI-ProteinID:
NP_919343
ZFIN:
ZDB-GENE-020205-1
Ensembl:
ENSDARG00000037017
UniProt:
F1Q5A9
LinkDB
All DBs
Position
23:complement(32447507..32493899)
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AA seq
1183 aa
AA seq
DB search
MEQLSPEEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGASSQPVPPAP
SHTLALNAQNVTPATSPMGASGVAYRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRNLAEKDSSSNPDVSEELALQLICKILRVS
WKEQDRDVIFLPSLAAEFQKNPKDVYSDFKDLIGQILMEALMMSTRSRDCNPFASLTATS
QPITAARSPDHHLTLVPPSSQGGSPMMPCAGSFGASSLSSLGASAGGMAGDSGSDRFTIE
SCKETEMLNYLIERFDSVGMEERKAPKMCSQPAVSQLLSNIRSQCISHAALVLQGALTQP
RAPLQPSLLVPYMLCRNLPYGFIQELVRMTHQEEDVFKQIFVPILQGLALAVKECSFDSD
NFKFPLMALAELCEIKFGKTHPVCNLITSLPLWCPDPLSPGTGREIQRLSFLGAFFSLSV
FAEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKILHNILLNGETREAALS
YMAALVNRNVKKAQMQTDDKLVSTDGFMMNFLWVLQQLSMKIKLETVDPLYIFHPKCRLN
VSPEETRLKATMEELKSWLTELHEDPTKFSEPKFPTECFFLTLHAHHLSILPCCRRYIRR
LRAIRDLNRTVEELKNSENQWKDSPLAGRHREMLKRCKTQLKKLVRSKACADAGLLDENL
LRRCLQFFSMVIQLILRMVEPAFPHVSLPLNPEIPKSFAALPEFYIEDVAEFMLFIVQYF
PQVLYEPCTEDIVTFLIVFICSQNYIKNPYLIAKLVEVLFVTNPAVQPRTQRFFEMLENH
PLSVNQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNINHQGTFLEEFNS
GKQFVRYINMLINDTTFLLDESLESLKRIHEIQEEMKNKEQWDLLPREQQQSRQSQLTQD
ERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVE
NPEKYGFEPKKLLDQLTDIYLQLDCPRFAKAIADDQRSYSRELFEEVISKMRKAGIKSTI
AIEKFKLLLEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIIL
RHLLNSPTDPFNRQPLTESMLEPVPELKERIQAWMREKQTGRY
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcagtcctgaagagatccgtagaaggcggttggcccggttagctggaggc
cagacatcacagcccagcacccccctcagcacccctctgacatccccacagagagagact
cccccaggacctttgccaggaccctccggggcctcatcacagcctgtcccaccagctcca
tctcacactctcgcactaaatgcccaaaatgtcacccctgccacctctcctatgggggcc
tcaggggttgcgtaccgcagccagagcagcgagggggtcagttctctctccagctctcca
tctaacagcctggagacacagtcccaatccctatcccgctcccagagcatggacatcgac
acagcctcctgcgagaagagcatgtcccaagtagatgtggactcaggaatcgagaatatg
gaggtggaagacagcgatcgcagggagaaaaggaaccttgctgagaaggactcctcatcc
aatcccgatgtctctgaagagttggcgttgcagctaatctgtaagattttgcgtgtttcc
tggaaggagcaggaccgtgatgtcatcttcctcccttctcttgctgctgagttccagaag
aaccctaaagatgtttactctgacttcaaggacctgatcgggcagattttgatggaggct
ctcatgatgtccacccgttcccgtgactgtaacccattcgccagcttgaccgccacatct
cagccaattactgctgccagatctccagaccatcacctgactcttgttccaccctccagc
cagggcggcagtcccatgatgccctgcgctggttcattcggtgccagctctctttccagc
ctgggtgcatctgcaggagggatggctggtgactcaggtagtgaccgctttaccatagag
tcctgtaaagagacggagatgctcaactacctcatcgagcgctttgacagcgtggggatg
gaggagagaaaggccccaaagatgtgcagccaaccagctgtcagtcagctgctgagcaac
attcgctcccagtgcatttcccatgctgcactagtgcttcaaggtgccctcacacagccc
agagcccctcttcagccctccctgctggttccctacatgctgtgccggaaccttccatac
ggtttcatccaggagctggtgcgcatgactcaccaggaggaggacgtgttcaaacagatc
ttcgttcccattcttcaagggcttgctttagctgtaaaagaatgttcttttgacagtgac
aacttcaagttccctctgatggctttggccgagctctgtgaaatcaagttcgggaagact
caccctgtatgcaatttgatcacctctctgccgttgtggtgtcctgaccctctcagtccc
gggacaggaagagaaattcaaagactctccttcctcggagcgttcttcagcctttctgtg
ttcgctgaagatgacactaaagtgggagacaagtacttctcaggccctgccatcactatg
gagaacacgcgtgtggtcagccagtctctgcagcactatctggagtctgccaggggagat
ctgtttaaaatcctgcacaacatcttgctgaatggagagacaagggaagcagctctgagc
tacatggcagctcttgtgaatcgtaatgtgaagaaggctcagatgcagaccgatgataag
ttggtgtccacagacggcttcatgatgaacttcctgtgggtcctgcagcagctcagtatg
aagatcaagctggaaacagtggatcctctctatatcttccaccccaaatgtcggctgaat
gtcagcccggaagagacgcggctcaaagccactatggaggaactaaagagctggctcact
gagctgcatgaagacccaaccaagttttcagagcccaagttcccaacggagtgctttttc
ttaacgcttcacgcacatcatctgtccatcctcccatgctgtcggcgctacataaggaga
ctgagggccatcagggatctgaacagaactgtagaggagctgaagaacagtgagaaccag
tggaaggattccccgttggctggtcgtcatcgggagatgcttaagagatgtaaaacacag
ctcaagaaactggtgcgctctaaagcgtgtgcagatgcagggctgctggatgagaacctc
ctccgcagatgtctgcagttcttcagtatggtcatccagctcatcctgcgtatggtggag
cctgccttcccacatgtatccctgcctctgaatccagaaatccccaaaagctttgcagca
ctgcccgagttttacattgaagatgtggctgagttcatgctttttattgtgcagtacttt
ccgcaggttctctatgagccgtgcactgaagacattgtgaccttcctgatagtcttcatt
tgcagtcagaattatataaagaacccatacttaattgccaagctggtggaggtgttgttc
gtcaccaaccctgcggtacagccgcgcactcagcgtttcttcgagatgttggagaaccac
ccgctgtctgtcaatcagcttgtgcccgcccttatgaaattctacacagatgtggagcac
actggagccacaagcgagttctatgacaagttcaccattcgctatcacatcagcaccatt
ttcaaaagcctctggcaaaacattaaccaccaaggcactttcctggaggagttcaactcc
ggtaaacagtttgtgcgctacatcaacatgttaataaatgacacaacgtttctgctggac
gagagtttggagtctctgaaacgcatccatgagattcaggaggaaatgaagaataaggag
caatgggacttgcttcccagggagcagcagcagagcagacagtctcagttgactcaggat
gagcgagtgtcacggtcttacctggctttagccacagaaacggtggatatgtttcatatc
ctcaccaaacaggtccagaagccgttcctcaggcctgaactgggtcctcgtctggctgcc
atgttgaattataacctgcagcagctatgtgggcctaaatgtcgagacttgaaggtggaa
aaccctgaaaaatatggtttcgagccaaaaaagcttctggatcagctcactgacatctac
ctgcagctagactgtccccgatttgctaaagccatcgcagatgaccagcggtcgtatagc
agggagctctttgaggaggtcatttccaaaatgagaaaggcgggtattaaatccaccatc
gctattgagaaattcaagcttctgttggagaaggtggaggagattgtagcccgcaattct
cagtcagagatggattacagtgacgctccggatgagtttaaagacccgctgatggacact
ctcatgaccgatcccgtgcaacttccctcgggcaacataatggaccgttccatcatcctg
cgacacctgctgaactctcccactgaccccttcaacagacagcctctgaccgagagcatg
ctggaaccagtcccagagctgaaggagcgaatccaggcctggatgagagagaagcagacc
ggccgctactga
DBGET
integrated database retrieval system
