Danio rerio (zebrafish): 192311
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Entry
192311 CDS
T01004
Symbol
srrt
Name
(RefSeq) serrate RNA effector molecule homolog
KO
K27103
serrate RNA effector molecule
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
192311 (srrt)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
192311 (srrt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
192311
NCBI-ProteinID:
NP_775345
ZFIN:
ZDB-GENE-020419-13
Ensembl:
ENSDARG00000017762
UniProt:
Q66I22
A0AB32TWE4
LinkDB
All DBs
Position
5:complement(4253929..4297481)
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AA seq
896 aa
AA seq
DB search
MGDSDDEYDRRRRDKFRRERSDYDRSREREDRRRDDWNDRRPSAREWDRGRERRSRGEYR
DYDRGRRERFSPPRHDMSPQQKRMRRDWDDHGGDPYHGGYDLGYGGGGGPSYAPPQPWGH
PDMHLMQPHHGIPIQARLGNIHDMDLGPPPPVMKTFKEFLISLDDSVDETESVKRYNEYK
IDFRRQQMQDFFLAHKDEEWFRSKYHPDEAGRRKAEAHSALQNRLGVYMYLMDNNWFESV
SLDIERAPQITKILDAAVIKMEGGAENDLRILEQPSEEEEERERLSSGGTPSEPSKRDEP
KPADTENKPSEEKDKMEEGEESAEKDGEKASAGGSEGEEKTEKEAPAEPIPEPKKLSKKR
KRKHSGDSEDEASASESESDSDSDSNSHCSEKPSEREREPEEVEEKEEEEEEEGEAADGK
EQTDEQTEREKEKEKKVKDDQPPRPRPLHRTCSLFMRSIAPTISKAEIVALCRRYPGFMR
VCLSEPQPERRFFRRCWVTFDRGVNIKEICWNLQNIRLRDCELAPGVNRDLARRVRNVNG
ITQHKQVLRNDIKLAAKLIHALDDREKLWSQKPREETPTLELPAQNPILKNITDYLIEEV
SAEEEELLGSAGGGDSEDGSKEGNPTEITVERDEKLVKVLDRLLFYLRIVHSIDYYNTCE
YPSEDEMPNRCGIIHVRGPIPPNRITLREVSDWQKTFEEKMGPLFSVKENLSEDEAAKMG
RKDPEQEVEKFVVANTQELGKDKWLCPLSGKKFKGPEFVRKHILNKHGDKIEEVKKEVVF
FNNFLMDAKRPCIPEMKPPPHPGPGQGVLSPGGLPFPPQGPQGLMGFGQPRPPLMGYGGG
PPYPPNQYGGGRGNYDNFRGQGGYPGKPRNSRVMRGDPRNIIEYRDLDAPDDVDFF
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagtgatgacgagtacgaccgcagacgcagagacaagttccgccgggagagg
agcgactatgaccggtccagggagagagaggaccgccgtagggatgactggaatgaccgg
cggccctcggctcgggaatgggaccggggccgagagcgtcgcagcagaggggagtaccgg
gactacgacaggggccgacgagagagattctcccctccacgacatgacatgagcccccaa
cagaagcgcatgaggagagactgggatgaccatggaggtgatccgtaccatggtggctat
gatctgggttatggtggcggtggaggacccagctacgcccctcctcagccgtggggtcac
cctgacatgcacctgatgcagccccatcatggaatccccatccaggccaggctgggaaac
atccacgatatggatcttggtcctcctcctcctgtgatgaagacctttaaggagtttctg
atttctctggatgactctgtggacgagacggagtcggtcaaacgctacaatgagtacaag
attgattttaggcgtcagcagatgcaggacttcttcctggcccataaagatgaagagtgg
tttcgctcaaagtaccacccggatgaggctgggaggcgtaaagctgaagcccacagtgct
ctgcagaaccggctgggcgtctacatgtacctgatggacaacaactggtttgagtcggtc
tctttggatattgagcgtgctccgcaaatcaccaagattttagatgcagccgtgataaag
atggagggaggagcagaaaatgacctgcgcatcctggagcagcccagcgaggaagaagag
gagcgtgagagactgtcatctggtggaactccctctgaaccctctaaacgggacgaaccc
aagcctgcagatactgagaacaaaccctcagaggaaaaagacaagatggaagagggtgag
gagagcgctgagaaagacggagaaaaggcttctgcaggaggaagtgaaggagaggagaaa
actgagaaggaagcacctgctgaaccaatccctgaacccaagaagctgagtaagaagagg
aagaggaagcacagtggagacagcgaggatgaagccagtgcatctgagagcgaatctgat
tctgactccgactcaaactctcactgctctgagaaaccctcggagagagagagagaacca
gaagaagtggaggaaaaggaagaagaggaagaagaggagggtgaagcggctgatggaaag
gagcagacggatgagcagacggaaagagagaaggaaaaagagaagaaagtaaaggatgat
cagcctccacgtcctcgacctcttcacaggacgtgttctctgttcatgaggagtatcgct
ccaacaatatctaaagcagagatcgtggctctgtgtcgacgttatccaggatttatgcgc
gtttgtttgtcggaaccacagccagagcgcaggtttttccgccgttgttgggtgaccttt
gacagaggagtgaacatcaaagagatctgctggaacctgcagaacatccggctgcgggac
tgtgaattggctcctggagttaatcgtgatttggcgcgtcgggtgcgaaacgtcaacgga
atcactcagcataagcaggttctgcgtaacgacatcaagctagcggctaaactgattcac
gcactggatgacagggagaaactctggagccagaaacccagagaagagacgcccactcta
gagcttcctgctcaaaaccccattctgaagaacatcactgattacctgatagaggaagtg
agtgcggaagaggaagagcttctgggaagtgccggaggaggcgactctgaagatggatcc
aaagagggaaaccccactgagattactgtggagagagatgagaaactcgtcaaggtgttg
gaccgtctcctcttttatctgcgtattgtacactctattgactattacaacacctgcgag
tacccgagtgaggacgagatgccgaaccgctgcgggatcatccatgtgcgagggcccatt
cccccaaaccgcattactctcagagaggtgagtgactggcagaagacttttgaagagaaa
atgggacccttgttcagtgtgaaagaaaacctgtctgaggacgaagcggcgaaaatgggc
cgcaaagacccagaacaggaagtggaaaagtttgtggtggccaacacacaggaactgggc
aaagacaagtggctctgccctctaagtggcaaaaagtttaagggcccagagtttgtgagg
aagcacatcctgaacaaacacggggacaagattgaggaagtaaagaaagaggtggtgttt
ttcaacaacttcctaatggatgctaaaagaccatgcatcccggagatgaaacccccaccc
catccaggcccaggacagggagtgctgtcacccggtggtcttcccttcccaccgcagggt
cctcaaggtctcatgggttttggtcagcccagacctccacttatgggttatggaggtggt
cctccgtatccccctaaccagtatggtggaggcagaggcaactatgataacttccgtgga
cagggcggatatcctggaaaacccagaaacagccgagtgatgcgtggagatcctcgcaat
atcatcgagtatcgtgatttagacgcacctgatgatgtggatttcttttag
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