KEGG   Danio rerio (zebrafish): 192318
Entry
192318            CDS       T01004                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    192318 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    192318 (sf3b4)
Spliceosome [BR:dre03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    192318 (sf3b4)
 Complex B
    192318 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    192318 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 192318
NCBI-ProteinID: NP_705947
ZFIN: ZDB-GENE-020419-22
Ensembl: ENSDARG00000018574
UniProt: Q6NWB3
LinkDB
Position
19:8480180..8486678
AA seq 400 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSMPTPVMTALGAAMPIPGMPPP
GAFPPVPPPGTMPPGMPPGMPMPPAPGTPAPQGGGGPPPGHPPFPPAGMHPPGMPHMPMP
PTGPPGMVPPPPGPPGSNQPRAPPPPQMPPPPMGVPPRGPFGPPMGPPMHPGMRGPPPPM
PPPGYGAGPPRPPPFGFQRGPPMPPRPPAPRGPMRAPAPS
NT seq 1203 nt   +upstreamnt  +downstreamnt
atggcggcgggaccgatttcagaacgaaatcaagatgccactgtatatgtgggtggtctc
gatgagaaggtctctgagcctcttttgtgggagcttttccttcaagctggtcctgttgta
aacacacacatgcccaaagacagagtaacaggacaacaccagggttatggctttgtggag
tttctcagcgaagaagatgcggactacgccataaaaataatgaatatgatcaaactttac
ggcaagcccatacgagtcaacaaagcttcagcgcacaacaagaacctcgacgttggtgcc
aacatcttcattggcaacttggaccctgagatcgacgagaaattactttatgacacattc
agcgctttcggtgtgatccttcagacccccaagatcatgcgagaccccgatacgggcaac
tcgaagggttacgccttcatcaactttgccagttttgatgcgtcagatgcggctatcgag
gctatgaatggccagtatctgtgtaatcggcccatcactgtttcatacgcgtttaagaaa
gactcaaagggtgaaagacatgggtcagcagccgagcgtctccttgccgcacagaatcca
ctgtcccaggccgatcgcccacatcagcttttcgcagatgctccacctcctccaagcatg
cccacgcctgtcatgactgccctcggagcagccatgcctattccaggaatgcctcctccc
ggtgctttcccacctgttcctcctcctggcacaatgccacctgggatgcctcccggtatg
cccatgcctccagcaccaggtactcctgcgccacagggcggtggaggacccccaccggga
cacccgcccttccctcctgctggaatgcatccgccaggaatgccgcatatgccgatgcct
ccaacgggacctccaggaatggtgcctcccccacctggcccaccaggatctaaccaacca
agagcaccgcctccaccacaaatgcctcctccacccatgggtgtccctcccagaggaccc
tttggacccccaatgggtccaccaatgcatccgggtatgaggggtcctcctccaccaatg
ccgcctccaggttatggtgcgggaccacccagacccccaccctttggttttcagagaggg
cctcccatgccgcctcgtcctcctgcacccagaggtccgatgagagcaccggcaccttcc
taa

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