Danio rerio (zebrafish): 192328
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Entry
192328 CDS
T01004
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
192328 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
192328 (u2af1)
Spliceosome [BR:
dre03041
]
Complex A
U2 snRNP components
U2 related factors
192328 (u2af1)
Complex B
192328 (u2af1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
GRP
Motif
Other DBs
NCBI-GeneID:
192328
NCBI-ProteinID:
NP_803432
ZFIN:
ZDB-GENE-020419-1
Ensembl:
ENSDARG00000015325
UniProt:
Q8JHJ3
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All DBs
Position
9:complement(9230448..9242690)
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AA seq
249 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGLNAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREE
DAEKAVINLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL
RRELYGRRRKRHRSRSRSRERRSRSRGRNKGVGGAAAGGGGGGGGGGGGGGGRDRERRRS
RDRERSGRF
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatacttggcgtctattttcggtacagaaaaagacaaggtcaactgctctttc
tactttaaaattggagcctgtcgccatggagaccgatgctctagacttcataataaaccc
accttcagtcagaccattgccctgttgaacatctacaggaacccacaaaacacagcccag
tctgctgatggcttaaatgctgtcagtgatgtggagatgcaggaacattatgatgagttc
tttgaggaggtcttcactgaaatggaggagaaatatggagaggttgaggagatgaacgtc
tgcgataatttaggagatcacttggtgggaaatgtctatgtgaagttccgccgtgaagaa
gatgcagagaaagcggtgattaacctgaacaaccgctggtttaatgggcagcccattcat
gcggagctctcgcctgtcactgacttcagagaggcctgttgtcgacagtatgagatggga
gagtgcactcgaggaggcttctgcaatttcatgcatctgaagccaatctcaagggaacta
aggagagagctgtacggccgcagaaggaagagacatcggtcccgctctcgctcccgtgaa
cgacgctctcgctctaggggacgcaataaaggagttggtggtgcagcagcaggcggtggt
ggtggcggcggtggtggtggtggaggtggaggaggaagagaccgagagagacggcggtca
agagatagagagcgttctggaagattttaa
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integrated database retrieval system