KEGG   Danio rerio (zebrafish): 252845
Entry
252845            CDS       T01004                                 
Symbol
pals1a
Name
(RefSeq) protein PALS1
  KO
K06091  MAGUK p55 subfamily member 5
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04519  Cadherin signaling
dre04530  Tight junction
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    252845 (pals1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    252845 (pals1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:dre04990]
    252845 (pals1a)
Domain-containing proteins not elsewhere classified [BR:dre04990]
 PDZ domain-containing proteins
  MAGUK family proteins
   252845 (pals1a)
SSDB
Motif
Pfam: Guanylate_kin L27_N PDZ SH3_2 PDZ_6 L27 PDZ_2 SH3_1 MMR_HSR1 CSN4_RPN5_eIF3a SH3_9
Other DBs
NCBI-GeneID: 252845
NCBI-ProteinID: NP_919344
ZFIN: ZDB-GENE-020712-1
Ensembl: ENSDARG00000006272
UniProt: Q8JHF4 B3DIW9
LinkDB
Position
17:35895624..35951329
AA seq 703 aa
MQKAPLLTLIPHTHLHHTPPHMRAAMMTTSHMNGYVTESDGGGGTDIVEEGVQRHREMAV
DCPSELGARTLPVRRSAQLEKIRQQQEDRRRREEEGRSRQELDLNSSMRLKKLSQNPKVG
IDNPTFEQMEGPGGSAGGLQSLIAPPALLELEDLLMSLKQVQHSLNDSQSQEDVELVLQL
VQKPDFQKAFSIHNSVAHYMNRPSPPYPLTDHAQTLAQEVEVMVQNSSHKEGLELSSLLS
TSHMQALMMAHDSVAEQEMQLEPLVPSVNASETLTQWGGETVKIVRIEKAKDIPLGATVR
NDMDSVVISRIVKGGAAERSGLLHEGDEILEINGVEIRGKDVNEVFDILADMHGVLSFVL
IPSAQIKSPPIKETVVHVKAHFDYDPSDDPYVPCRELGLCFQKGDILHIISQDDPNWWQA
YRDGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKTGKLWCAKKTKKKRKKMQYNA
NKNDDFDNEEILTYEEMALYHQPANRKRPIALIGPPNCGQNELRQRLLSTEPDRFAGPVP
HTTRSRRDAEANGRDYHFVSRQAFEMDSAAGKFIESGEFEKNFYGTSTDSVRQVINTGKI
CLLCVHTQSLKVLRSSDLKPYIIFIAPPSQERLRALLAKDNKNPKPEELRDIIEKAREME
QNYGHLFDAAIVNTDLDKSYQELLRLINKLDTEPQWVPSSWLR
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgcagaaagcacccctcctaaccctcatacctcacacacacttgcaccacacaccacca
cacatgcgcgcagccatgatgaccacctcccacatgaacggatatgtgaccgagtcagat
ggcgggggaggtactgacatcgtggaagagggggtgcagaggcacagggagatggcggtg
gactgcccaagtgagctgggtgcccgcaccctgcccgtcagacgcagcgctcagctggaa
aagatccgccagcagcaggaggaccgcagaagacgagaggaggagggccgcagccggcag
gagcttgacctcaactcgtccatgcgcctcaagaaactctcccagaacccaaaagtgggc
atcgataaccccacctttgagcaaatggaaggtcctggtggctccgcaggtggtcttcag
agcctcatcgcaccaccagctttactagagctggaggacctgttgatgtcccttaagcag
gtgcagcataatttgaatgactctcaaagtcaagaggacgtggagctggttctacagctg
gtccagaagcctgacttccagaaagccttcagcattcacaactctgtggcccactatatg
aaccggcccagccccccctaccccctgacggatcacgcacagaccctggctcaagaggtg
gaggtcatggtgcaaaacagctcacacaaggaaggacttgagctaagcagcctgctctca
acgtcccacatgcaggcgctcatgatggcacatgacagcgtggctgaacaagagatgcag
ctggagcctcttgttccttctgtcaatgcaagcgagactctcacccagtggggaggagag
actgtcaaaattgtacggattgaaaaagccaaggacatcccattgggagcgactgttaga
aatgatatggacagtgtggtcatcagccggattgttaaagggggggcggcagaacgcagc
ggcctgctacacgaaggagacgagatcctggagatcaacggtgtggaaatccgtggcaaa
gatgtcaacgaagtcttcgacatcctggcggacatgcatggtgtactgtcttttgttctc
atccccagcgcacagatcaaatctcctcctattaaagagactgtggtacatgtgaaggca
cattttgactatgacccctcagatgacccatatgtgccatgccgagagctcggcctgtgc
tttcagaagggggatatactccacataatcagccaagacgaccccaactggtggcaggcc
tacagagatggggatgaagacaaccagcctcttgctggcctcgtccctggcaaaagtttt
cagcagcagagggaggcaatgaagcaaaccatagaagaggataaagagcctgaaaaatca
ggaaagctttggtgtgctaaaaagaccaagaagaagcggaagaagatgcaatacaatgct
aacaaaaatgatgactttgataatgaggagattctcacatatgaagaaatggcactttac
caccaaccagccaatcgtaagcggcccatcgcactaatcggcccaccgaactgtgggcaa
aatgagctcagacaaagactcctctccactgagccggacaggtttgctggacctgttcct
cacaccacacggagtcgacgtgacgctgaggcgaacggccgtgactaccactttgtgtcc
cgccaggccttcgagatggactctgcagcagggaaattcatagagtccggagagtttgaa
aagaacttttacggcaccagcacagactctgtccgacaagtcatcaacacaggcaaaatc
tgcctcctgtgcgtacacacccagtctttgaaggtgttgcgcagctcggacctcaagccc
tacatcatcttcatcgctcctccatcccaagagcgattgagagccctcttagctaaagac
aacaaaaacccaaagcccgaggagctgcgagacattatcgagaaggcccgagagatggag
cagaactacggccacctgtttgatgctgccattgtgaacaccgacctggacaaatcctac
caggagctgctgcgtctcatcaataaactagacactgaaccccagtgggtcccttcatcc
tggctgcgctga

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