Danio rerio (zebrafish): 252850
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Entry
252850 CDS
T01004
Symbol
thbs4b
Name
(RefSeq) thrombospondin-4-B precursor
KO
K04659
thrombospondin 2/3/4/5
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04145
Phagosome
dre04510
Focal adhesion
dre04512
ECM-receptor interaction
dre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
252850 (thbs4b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
252850 (thbs4b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
252850 (thbs4b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
252850 (thbs4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
252850 (thbs4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
252850 (thbs4b)
00536 Glycosaminoglycan binding proteins [BR:
dre00536
]
252850 (thbs4b)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Phagocytosis
Opsonins
252850 (thbs4b)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
252850 (thbs4b)
Exosomal proteins of colorectal cancer cells
252850 (thbs4b)
Exosomal proteins of bladder cancer cells
252850 (thbs4b)
Glycosaminoglycan binding proteins [BR:
dre00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
252850 (thbs4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
Prominin
DUF7630
Motif
Other DBs
NCBI-GeneID:
252850
NCBI-ProteinID:
NP_775333
ZFIN:
ZDB-GENE-020708-4
Ensembl:
ENSDARG00000020072
UniProt:
Q8JGW0
LinkDB
All DBs
Position
21:5129523..5162687
Genome browser
AA seq
949 aa
AA seq
DB search
MAGTMHLLTAVSLILMLSSANAESTVYNLLTSPDCLPDLLHGGLAEQGVTELYILTTFRI
QPGTGNTIFSLYNPRDNSKYFEFSVFGKANKAILRYLRRDGRMSAVTFNKLNLADGEKHR
LLFHLKGLEVGHPGGFPHSQGALPVPGVELHLDCRLVETLRDLPAVFNGLNNHQAVELKT
MQGKAQEGLEELKLAYGDSVENVASLQDCHTQSDSVQALGLNTKQLTTQMLELTKVINEL
KDVLIQQVKETSFLRNTISECQACGLSGAEVVKPKCAPGVCFRDDMCIETAEGVECGPCP
DGYTGDGYSCDDVDECQFNPCFPGVRCVNMAPGFRCEACPLGFTGKPLEGVGVAYAQTHK
QVCDDIDECKGPDNGGCTANSICVNSVGSYQCGRCKTGFTGDQIRGCKPEKSCGNRLQNP
CDPNAQCTEERDGTITCQCGIGWAGNGYLCGKDTDIDGYPDERLRCRDPTCRKDNCVTVP
NSGQEDADGDGKGDACDPDADGDGILNEQDNCWLTPNINQQNSDKDSHGDACDNCVRVDN
PDQRDTDSDGLGDACDDDMDGDGLKNFLDNCQRVKNRDQLDRDGDGVGDACDSCPDIPNP
NQSDIDNDLVGDSCDTNQDSDGDGHQDSKDNCPMVINSSQLDTDKDGIGDECDDDDDNDG
IPDSLPPGPDNCRLVPNPEQIDDNNDGVGDICESDFDQDKVIDRIDNCPENAEITLTDFR
AYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVT
DDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHLRN
SLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRVRFYEGTELVADSGVT
IDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTQHGMDPL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggccggcacaatgcatctcctcacggccgtttctctgatcttaatgctcagctcagca
aacgcagaatcaaccgtgtataacctcttaacgtcaccggactgtctaccggatctactg
catggtggtttggcagagcagggagtaacggagctctatattctcacaacgttccggatc
caacctggaaccggaaacaccatatttagcctgtacaatccacgagacaacagcaagtac
tttgaattctcggtgtttggaaaagcaaataaagctattttgcgatacctgcgcagagat
ggcaggatgagtgcggtcacctttaacaaactgaacctggctgacggcgagaagcatcgg
ctgctcttccatctgaaaggactggaggtgggacatcccggaggcttcccgcacagccag
ggagcgctacctgtgcctggggtggagctacacctggattgcagactggtggagacgctg
agagatttaccagctgtgtttaacggcctaaacaatcaccaggcggtggagctcaagact
atgcaggggaaagcacaagagggcttggaggagctcaaactggcatatggcgattcagtg
gaaaatgttgcatcgctgcaggactgccacactcagagtgactcagtacaggctttaggg
cttaacacgaaacagcttacaactcagatgctggagctaacaaaggtcattaatgagctg
aaagacgttcttattcagcaggtgaaggaaacatctttcctcagaaacaccatctctgag
tgccaggcctgcgggctgagtggagcggaggtggtgaaaccaaagtgcgcccctggagtg
tgtttccgtgatgatatgtgcatagaaacagctgaaggagtggagtgtggtccatgcccc
gatggatacactggagatggatacagctgtgacgatgttgatgagtgccagtttaacccc
tgttttcctggtgtgaggtgtgtgaacatggctccaggcttccgctgtgaggcctgtcct
cttggattcactggcaaaccactggagggtgttggcgtggcctatgcacaaacacacaag
caggtgtgtgatgatattgatgagtgtaaagggccagataatggaggatgcacagcgaac
tccatctgtgtgaattctgtgggatcatatcaatgcgggcgatgcaaaaccggattcacg
ggagaccagatcagaggttgtaagccagagaaaagctgcggaaaccgtctgcagaaccct
tgcgatcccaatgcacagtgcacagaggagagagacggcaccattacatgccagtgtggc
attggatgggctggaaatggttatctctgcgggaaagacactgacatcgatgggtaccct
gatgagaggctgcgctgccgagacccaacctgcagaaaggataactgtgttaccgttcca
aactcgggacaagaggacgcagatggcgatgggaagggtgacgcatgtgacccagatgca
gatggagatggaatattgaatgagcaggataactgctggttgacgccaaatataaatcag
cagaatagtgataaggacagccatggtgatgcttgtgacaactgtgtccgagtggataac
ccagaccagagagacacagactctgatggactcggagatgcatgtgatgatgatatggat
ggagatgggctgaagaacttcctggataactgccagcgagtgaaaaatcgtgatcagctg
gatcgtgatggggatggggtgggggatgcatgcgatagctgtcctgatatcccaaatcca
aatcagtctgacattgacaatgatcttgtcggagactcttgtgatacaaatcaagacagt
gatggtgatggacaccaagatagcaaggacaactgcccgatggtaattaacagctcccag
ctagacacagataaagacggaataggagatgaatgtgatgatgacgatgataacgacggt
attcccgactcattgcctccaggaccagataactgtcggttggtgcccaaccctgaacag
atagacgacaacaatgatggagtgggtgacatatgtgaatccgactttgaccaggacaag
gtaatcgacaggatcgataactgtccagaaaatgccgagatcacactgacagatttcaga
gcctatcagacagttgtactggatccggagggtgatgcccagattgaccccaactgggtg
gttctcaaccagggaatggagattgtccaaacgatgaacagtgatccaggccttgctgtt
ggttacacggcatttagcggtgttgatttcgagggaacattccatgtaaatacagtgact
gatgacgactatgccgggttcatctttggataccaagattcctccagtttctatgtggtg
atgtggaagcaaacagaacagacgtactggcaggccacacccttcagagctgtagctgaa
cctggcattcagctgaaggcagtgaagtccaagactggtccaggtgagcatttgaggaac
tcgctctggcatacaggtgacactaatgatcaggtacgtctcctgtggaaggatccaaga
aacgttggttggaaggacaaggtatcataccgctggtacttgcagcaccgcccacaagtt
ggatacatcagggttcgtttctatgagggaacagagcttgttgcagattctggggtgaca
attgataccacaatgagaggaggaagactgggagtgttctgcttttctcaggagaacatc
atctggtcaaacttgaagtaccgctgcaatgacaccatcccagaggacttccaagagttc
agtacacaacatggcatggaccccttgtaa
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integrated database retrieval system
