Danio rerio (zebrafish): 266983
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Entry
266983 CDS
T01004
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform 2 precursor
KO
K06766
neogenin
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04350
TGF-beta signaling pathway
dre04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
266983 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
266983 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
266983 (neo1a)
Cell adhesion molecules [BR:
dre04515
]
Immunoglobulin superfamily
DCC/UNC5 family
266983 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
C2-set_2
fn3_SORL1
Fn3_Dep-1_3rd
C1-set
fn3_2
Sp38
DUF4912
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
266983
NCBI-ProteinID:
NP_001315426
ZFIN:
ZDB-GENE-021031-1
Ensembl:
ENSDARG00000102855
UniProt:
A0A0R4IIB3
LinkDB
All DBs
Position
7:68709147..69044813
Genome browser
AA seq
1409 aa
AA seq
DB search
MAERGARLLLSLFCLTITVSHAEKGSAVRNFSPFWFSTEPSDTLAVRGAPVLLNCSVHSE
SPAKIEWKKDGSFLSLASDERRQVLADGSLLISSVVHSKHNKPDEGVYQCVATIDNLGTI
ISRTARLNVAGIARFLSQPEMASVRVGDSQVLSCEVNPDLVSFIRWEQNKEAVELDHRVF
SLPSGALVISNATETDAGLYRCVIDNAGPTKTSEEAQLHILTETGEERTLEFLQEPQHVS
KLVGESVLLPCVVTGYPTPEITWMYKDQLIEDSSGRFEILGGGSLRIFNLTEEDAGVYNC
LAENTNGSIEAQAELTLKDSPQFLKKPVNVFAHEATDVIFECEVSGSPSPTIKWVKNGDA
VIPSDYFKIIKEQNLQVLGLVKSDEGFYQCLAENDAGNVQSSAQLVILDQGSRGGAGPTP
SAPRDVVASLVSTRFLKLTWRLPAEPHGDDVTYSVYYSLEGTNRERIVNTSRPGEMQVTI
QNLMPDTKYAFRVVAHNKNGPGESSVPLKVETQPEVQVPGPAPNLHAVVMSPSTVSLSWD
VPLIGNGEIQNYKIYYMEKGMDSEQDLDVNTLSYTMTGLKKFTEYSFRLVAYNKHGPGVS
TEDISVRTYSDVPSSPPQNMTVEVLNSKSLMIRWQPPPADAQNGEITGYKIRYRKGTRKS
EVAEITSGSQLYQLIDGLQRGTEYMLRVSAMTVNGTGPATDWTTAETFESDLDESRVPDV
PSSLHVRSLVNSIVVSWTPPENQDIVVRGYSISYGIGSPHAQTIKVDYKQRYYTIENLNP
NSHYVITLKAFNNVGEGIPVYESAITRPQSVPDPIPMLPPVGVQASVLNQDTIKVTWADN
SLPKNQKITDARYYTVRWKTNIPANTKFKVANTTTLFHTVTGLKPNTLYEFSVMVTKGRR
TSTWSMTAHGTTFESIPSSPPKDVTVVSKEGRPKTIIVNWQPPSEANGKITGYIIYYSTD
VKAEVHDWVIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVQFRTPKAESS
DKMANDQAPGISVKQGRPSAPDNGFGSPGKPDMSGTGDNHILVIVIIVSVGAFTIIVVVV
GAFLCTRRTTTQQKKKRAACKSANGSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPN
PVMTDTPIPRTSQDITPVDGSMDPMLQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDA
QPPQPVISAHPIHSLDNHHHHYHLGSLASPTRSYLHHQSSTRSIATPISHLDRAESTESV
RNTPNAELLPPSGQPSCTTDLSETDISFHSSAAEEEPAFATPTAHVRPTHPLKSFAVPAI
PAHAMYDSAALPSTPLLSQTGPHSVKTASIGTLGRTRTPMPVIVPNAPDVSEGCRLHEDA
GSNYETDELSEEMAHLEGLMKDLNAITTA
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcccggctgctcctctctcttttctgcctcacgatcacagtttca
catgctgaaaaaggatcagcagtgaggaacttcagcccattctggttctccacggagccg
tcggatacactagcggtgcgaggagcgccagttctcctcaactgctcagtccacagcgag
tctcctgccaagatcgagtggaaaaaagatggctctttcctcagcctggcttcagacgag
cgcagacaggtcctggccgatggctctctgctcatcagctcagtggtgcactccaaacac
aataaacccgatgagggggtttaccagtgcgtggctactatagacaacctgggcaccatc
attagccgtacagctagactcaacgtagcaggtatagcgcggttcctcagtcagcctgag
atggcgtcggtgcgggtgggcgacagtcaagtgttgagctgtgaagtcaacccagacctg
gtgtccttcatccgctgggaacagaataaagaggcggtggagctggaccacagagtcttc
agtctgcccagtggagctctggttatcagtaacgccacagagacagacgcgggtctgtac
cgctgtgtcatcgacaacgctggacccaccaagaccagtgaagaagcacagttgcacata
ctgacagaaacgggtgaggaaaggacgctggagtttctccaggagcctcaacatgtgtct
aaactggtcggcgaaagtgtcctgctcccctgtgtggtgacgggatatcccactcctgaa
atcacatggatgtacaaagaccagctcattgaggacagcagtggccgctttgagatactc
ggcggggggagtctgcggatcttcaatctcacagaggaggatgccggggtgtacaactgt
ctcgcagaaaacaccaatgggtccattgaggcccaggctgagctcacgctgaaggattct
ccacagttcctgaagaaacctgtgaatgtgtttgctcatgaagccacagacgtcatcttc
gagtgcgaggtctcaggatcaccttctcccaccatcaaatgggtgaaaaatggagacgcc
gtcatcccaagcgattatttcaaaatcattaaggagcagaacctgcaggtgttgggactg
gtcaagtcagatgaaggtttttatcagtgtttagctgagaatgacgctggcaacgtgcag
tcaagtgctcagctcgtcatattggatcaaggctccagaggcggcgctggccccacgccc
tccgccccccgtgatgtggtagcgtccctggtgtccacccgcttcctcaagctgacctgg
cgccttcctgctgaaccacacggagacgatgtcacctactcagtctactacagcctggag
ggcactaacagggagaggatcgtaaacaccagtcgtccaggagaaatgcaagtcaccatt
cagaacctcatgccagacaccaagtatgccttccgtgtggtggcgcacaacaaaaacggc
cctggagagagttcagtgcctctaaaggtcgaaactcagcccgaagtccaggtacctggt
ccggctccaaacctgcatgcagtggtcatgtcccccagcactgtcagtctcagctgggat
gtgcctcttataggcaatggtgagatccagaactacaagatctactacatggagaagggc
atggacagtgaacaggatctggatgtaaacacattgtcctacaccatgactggcctgaag
aagttcacggagtacagtttcagactggtggcctataacaaacatggaccgggagtctcc
actgaggacatatcagtgcgcacatactctgatgtccccagctctcctccgcagaacatg
acggtggaagtgctgaactccaagagcctcatgatcagatggcagcctccaccagccgat
gcccagaacggagagatcacaggctacaagatccgctacaggaagggtacgaggaagagc
gaggtggcggagatcacttcaggatcacagctttatcagctcatagatggtttgcagcga
ggcactgaatatatgttgcgagtatctgcaatgacggtcaacggcacaggtcctgccaca
gactggaccactgcagagacattcgaaagcgatctggacgagtcaagagtgccggacgtc
ccgagctctctgcatgttcgttctctggtcaacagtattgtggtgagctggacgcctcca
gagaaccaggacatcgtggtgaggggttacagtatcagctatgggattggcagtcctcac
gcacagaccatcaaagtggactacaagcagagatactacaccattgagaacctgaatccc
aactcgcactacgtgatcacgctgaaggccttcaacaacgtgggtgagggaatccctgtg
tacgagagcgccatcacacgaccacagtcagtaccagaccctatacccatgctgcctcct
gtgggcgttcaggcatctgtcctgaaccaagacaccatcaaagtcacctgggcggacaac
tcgctgcctaagaaccagaagatcacagatgcgcgctactatacagtgcgctggaagacc
aacatacccgcaaacacaaagtttaaggtggctaataccacgacgctatttcacacggtg
acgggtcttaaacccaataccttgtatgagttttcggttatggtgaccaagggacggagg
accagtacctggagcatgactgcacacggaacaacttttgagtcaatcccaagttctcca
ccaaaagatgtgactgtagtgagcaaagagggacgaccaaaaaccatcatcgtcaactgg
cagccgccatcagaagccaatggcaaaattacaggttacatcatttattacagcactgat
gtgaaggcagaggttcatgactgggtcattgagccagtcgtgggaaacaggctaacccat
caaattcaggagctgacccttgataccacctactactttaagatccaggctcggaactcc
aagggcatgggtcccatgtcggaagcggtccagttccgcactcctaaagctgaatcctct
gacaaaatggctaatgaccaagctccaggcatatctgtgaaacaaggaagaccttctgca
ccagataacggctttggatcacctgggaaaccagacatgtctggcactggtgataaccac
atcctggttattgtcatcattgtgtccgtgggtgcttttaccatcatcgtggtggtggtg
ggcgccttcctttgtacacgtcgtaccacaacacaacagaaaaagaaaagggccgcctgc
aagtccgccaatggatcccacaagtataagggcaactccaaagatctcaaaccaccagac
ctctggatccaccatgaacgtttggagctaaagcccatagacaaatcacccgaacccaat
ccagtcatgaccgacacaccaatccccaggacctcccaagacatcacgccggtggacggc
tccatggatcctatgctccagagacgcaactcttaccgtggccatgaatcagaggacagc
atgtctacactggcaggccgtcgggggatgagacctaaaatgatgatgccctttgatgca
caaccccctcagcctgtgattagtgctcaccccatccattccctcgataaccatcaccat
cattatcacttgggcagcctggcctcgccgacacgcagctatctccaccaccagagcagc
acgcgctccatcgccacccccatctctcatctagacagggcagagtccacagagtcagta
aggaacacccctaatgcggagctgctccctccatctgggcagccatcttgcaccactgac
ctttcagagacggacattagctttcacagctcagccgctgaggaggagccagcgttcgct
acacccacagcacacgttcgacctacacacccacttaagagttttgcagtgcctgccatc
ccggcccatgcaatgtatgactcggcagctttgcccagcactccactgctgtctcagaca
gggcctcactcagttaaaacagcctctattggtacactgggaaggacgagaactcctatg
cctgtcatagttccaaatgcgccggatgtctcagaaggctgcagacttcatgaagatgca
ggaagtaattacgagacggacgagttatcggaggaaatggcccatctcgagggcttaatg
aaggacctaaacgccatcacaacagcctga
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integrated database retrieval system
