Danio rerio (zebrafish): 280647
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Entry
280647 CDS
T01004
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform 2
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
280647 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dre01007
]
280647 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dre03016
]
280647 (kars1)
Enzymes [BR:
dre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
280647 (kars1)
Amino acid related enzymes [BR:
dre01007
]
Aminoacyl-tRNA synthetase
Class II (A)
280647 (kars1)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
280647 (kars1)
Prokaryotic type
Other AARSs
280647 (kars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
zf-C3HC4_5
TRM10_TRM10A
Motif
Other DBs
NCBI-GeneID:
280647
NCBI-ProteinID:
NP_001315435
ZFIN:
ZDB-GENE-021115-8
Ensembl:
ENSDARG00000103799
UniProt:
A0ACM8Q4T5
Q6DHE6
A0A0R4IC11
LinkDB
All DBs
Position
7:72869882..72889336
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AA seq
577 aa
AA seq
DB search
MADGAVVDGDKLSKNELKRRMKAEKKAAEKEAKVKEQQEQKETNDKPQQNAYGADEETLD
PNQYFKIRSQAIQALKGTAEDPYPHKFHVDLSLTEFIERYNHLQPGDHLTDVVLNLSGRV
HAKRASGAKLLFYDLRGEGVKLQVMANSRNYTSEEAFVHINNKLRRGDIIGVRGNPGKTK
KGELSIIPVEMTLLSPCLHMLPHLHFGLKDKETRFRQRYLDLILNDFVRQKFVTRSKIIT
YLRSFLDQLGFLEIETPMMNLIPGGAVAKPFITYHNDLNMNLYMRIAPELYHKMLVVGGI
DRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGAYKVT
YHPDGPEGQAYEIDFTPPFRRISMTQELEKELGVKFPPPDTYDSDEMRKFLDDLCVQKEV
ECPPPRTTARLLDKLVGDFLEVKCINPTYICDHPQIMSPLAKWHRSQKGLTERFELFVMK
KEICNAYTELNDPIRQRELFEQQAKAKAEGDDEAMFIDETFCTALEYGLPPTAGWGMGID
RLTMFLTDSNNIKEVLLFPAMKPEDNKPAAPAEGTSV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggagctgtggtggatggagacaaactcagcaaaaatgagctgaaaaggcgc
atgaaagctgagaagaaagcagctgagaaggaagccaaggtcaaagagcagcaggaacag
aaggagaccaatgacaagccacagcagaacgcatacggggcagatgaggaaacactggac
cccaatcaatacttcaagatacgttcacaagccattcaagccttgaagggaacagccgaa
gatccttaccctcacaaatttcacgtggacttgtctcttactgagttcattgagcgctat
aaccaccttcagcctggagaccacttgacagatgttgtcctcaatttatcaggtcgtgtt
catgctaagagggcttcaggcgccaagctgctgttctatgatctgcgaggagaaggagtc
aagctgcaggtcatggccaactccagaaactacacatcagaagaagcgtttgtgcacatc
aacaacaaactgaggcgtggagacatcatcggggtccgggggaaccctggcaagacaaag
aagggcgagttgagcatcatcccagtggagatgaccctgctgtctccatgtcttcatatg
cttccacatcttcactttggcctgaaagacaaggaaaccaggttcagacagcgatatctg
gacctgattcttaatgattttgtgagacagaagtttgttactcgttccaagattatcacg
tatctccgcagctttcttgaccagcttggatttctggagattgaaaccccaatgatgaac
ctgatccctggtggcgcagtagcaaagccatttatcacctatcacaatgatctgaacatg
aacctgtacatgagaattgctcctgagctttaccataagatgttggtagttggaggaatc
gaccgcgtgtacgagattggccgtcagttccgtaatgaaggcatcgatctcactcacaac
ccagagttcaccacctgtgagttctacatggcctatgccgactatcacgacctgatggaa
atcacagagaagcttctctcaggaatggtgaagcacattaccggagcttataaagtgacg
tatcatcctgatggtccagagggacaggcctacgaaatagacttcacccctcccttcagg
cgaatcagcatgacccaagagctggagaaggagttgggtgtgaagtttccacctcctgac
acctatgacagtgacgaaatgcgcaagttcttagacgacctgtgtgttcagaaagaagtt
gaatgtcctcctcccaggacaactgctcgacttcttgataagttggtgggagacttcctg
gaggtgaagtgcatcaacccaacatacatctgcgatcatccacagataatgagtcctctt
gctaaatggcacaggtcacagaaaggtctaactgaacgttttgaactctttgtgatgaag
aaggagatctgcaatgcctacacagagttgaacgatcccatcagacagcgagaactgttt
gagcagcaggctaaggctaaggcagaaggtgacgacgaggccatgttcattgatgagacc
ttctgcaccgctttagagtacggtcttccccccacagcaggatggggaatgggcatcgac
cgcctcaccatgttcctcacagactccaacaacatcaaggaggtgctgcttttccctgcc
atgaagccagaagacaataaaccagctgcacctgcagagggcacatcagtctaa
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