Danio rerio (zebrafish): 286832
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Entry
286832 CDS
T01004
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1 precursor
KO
K05635
laminin, gamma 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04510
Focal adhesion
dre04512
ECM-receptor interaction
dre04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
286832 (lamc1)
04518 Integrin signaling
286832 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
286832 (lamc1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Alanine_zipper
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
286832
NCBI-ProteinID:
NP_775384
ZFIN:
ZDB-GENE-021226-3
Ensembl:
ENSDARG00000036279
UniProt:
Q1LVF0
LinkDB
All DBs
Position
2:38856909..38955449
Genome browser
AA seq
1593 aa
AA seq
DB search
MSLFSCLLLWTLWAACSHGAMDECIDEDDRPQRCMPEFVNAAFNATVVATNTCGSPPEEF
CVQTGVTGVTKSCHICNAADPRLHHGAVYLTDYNQPVQPTWWQSQTMLAGIQYPNSINLT
LHLGKSFDITYVRLKFHTSRPESFAIYKRSSEDGPWTPYQYYSGSCEKTYSKNNRGFIRT
GEDEQQALCTDEFSDISPLYGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNRL
NTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEYSKLVCNCKHNTEGADC
NVCKPFYNDRPWRRATAENPNECLPCNCNGKSAECYFDPELYRATGHGGHCRNCADNTDG
PKCERCLANYYREASGQRCLSCGCNPVGSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHS
LSEAGCRPCSCNPAGSTQECDVQTGRCQCKENVDGFNCDRCKLGYFNLDPQNPQGCTPCF
CFQHSTVCESADGYSVHKITSTFDRDDEGWKGKQRDDSSVPVQWSPSSGEISLISEDYFP
IYFVAPDKFLHNQLLSYGQNLTLNFRIQRHDARLSAEDVVLEGSGLRVAVPLIAQGNSYP
GEETQTFVFRLHDTTDYPWRPTIKHADFQKLLYNLTSIMIRGTYSAQSAGYLDNVSLVTA
RRGPGTPARWVEKCTCPQGYLGQHCEQCDQGFRRSRPELRRFSTCERCNCNGHSDTCDPE
TGMCNCQHNTAGLSCERCKDGFYGDSTVGSSSDCKACPCPAGATCAVVPKTNEVVCTNCP
TGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNNNIEPNAVGNCNRESGECLKCIYNT
AGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQTACSQVTGQCPCLPHVINRDC
GACELGFYNLQSGKGCERCNCNPIGSTNGQCDIVSGQCECQPGVTGQHCERCEVNFFGFS
SSGCKPCDCDPEGSESAQCKEDGRCHCRPGFVGSRCDMCEENYFYNRSTPGCQQCPNCYS
LVRDKVNQQRQKLLDLQNLIDSLDNTETTVSDKAFEDRLKEAEKTIMDLLEEAQASKEVD
KGLLDRLNNINKTLNNQWNRLQNIKNTVDNTGAQADRARNRVRDAENLINTAREELDKAK
EAISKVDIKIPTTSGDPNNMTLLAEEARKLSEKHKADADQIEKIAKDANDTSTKAYNMLK
KALDGENKTSSDIDELNRKYLEAKDLAKNLEKQAAKVHAEAEEAGNKALKIYANLTSLPP
INTKTLEDDANKIKKEASDLDKLIDKTEKEYNDLREDLRGKETEVRKLLDKGKTEQQTAD
QLLARADAAKALAEEAAKKGKSTFQEAQDILNNLRDFDKRVNDNKTAAEDAMRRIPQINA
TINEANDKTRRAEAALGNAAADAKDAKAKAEEAEKIANDVQKGSAKTKADAEKAFEDTMK
LDKDVDKMMDQLTAAEKELEKKKAEADTDMMMASMASDNAKDAEGNARKAKSAVREVLNT
INALLGQLGNIDKVDLSKLNQIDNALKDAKDKMAGSELDRKLKELNDIAKSQEDMISDYD
RQIQEIRADIANLNDIKNTLPEGCFNTPSLERP
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttttagctgtttgttgttatggactttgtgggcagcgtgcagtcacggagcg
atggatgaatgtatagacgaggatgatcggcctcagcgctgcatgccggagttcgttaac
gcggctttcaatgcgaccgtggtggccaccaacacttgcggctcgccgcctgaagagttc
tgcgtacagaccggggttacgggagtcactaaatcatgccacatttgcaatgccgcggac
cccagactgcaccacggcgctgtttatctcaccgattacaaccaaccagtgcaaccaacc
tggtggcaaagccagactatgttagcgggcatccagtacccgaactccatcaacctgacc
cttcacctgggcaaatctttcgacatcacctatgtgcgtttgaagttccacaccagccgt
cctgagagttttgccatctacaagcgctccagtgaagacgggccttggaccccctaccaa
tactacagtggctcctgtgaaaaaacctacagcaaaaacaaccgtggcttcatccgcaca
ggcgaggacgagcagcaggctctgtgtacagatgagtttagcgacatctcgccactctat
ggaggaaacgtggctttctctacgctcgagggccgacccagtgcatataacttcgacaac
agccctgtactgcaggattgggtaactgccactgatatcagagtgaccctgaatcgatta
aacactttcggagatgaagttttcaacgatcccaaagtcctcaaatcctactactacgcc
atctcggattttgctgtgggaggaaggtgcaagtgcaatggccatgccagcgagtgcgtg
aagaacgagtacagcaagctggtgtgtaactgcaaacacaacacagaaggagccgactgc
aatgtgtgcaaacccttctataatgaccgtccctggaggagagccactgctgaaaaccct
aatgagtgtctgccttgtaactgtaatggaaagagcgctgaatgttacttcgaccctgag
ctgtatcgtgccactggtcacggaggtcactgccgtaactgtgctgacaatacagatggg
ccgaagtgtgagcgatgcctggccaactactacagagaggcctccggtcagcgctgtctg
tcctgcggctgcaaccctgttgggtctctcagcactcagtgtgataacactggcagatgc
agctgtaagccaggagtgatgggagacaagtgtgacagatgccaacctggataccactcg
ctctctgaggcaggatgcagaccgtgctcttgtaatccagccggaagcacacaggagtgt
gatgtccagaccggacgctgccagtgcaaggaaaatgtggacggattcaactgtgaccgg
tgtaaactgggctattttaatctggacccccagaatcctcagggctgcactccatgcttc
tgcttccagcattcgacagtgtgtgagagcgcagacggctacagcgtgcacaaaatcacc
tccacctttgacagagatgatgaaggctggaagggtaaacagagagatgactccagtgta
ccggtacagtggtcacccagttctggagagatctcactcatctcagaagattacttcccc
atctactttgtggctccagataaatttctgcataatcagctgttgagttatggtcagaac
ctcacgctgaacttcaggattcagcgtcacgatgctcgcctctcagcagaggacgttgtg
ctggagggctcggggcttcgtgtcgctgtgcctcttattgctcagggtaattcctaccca
ggagaggagacccaaacctttgtgttcagactacatgacacaactgactacccttggaga
cccaccataaagcatgcagacttccagaaacttctctacaatctgacttcaatcatgatc
cgtggaacctacagtgcacaaagtgctggttatttggataacgtgtctctggtgactgcc
cgccggggccctggcactccggcccgatgggttgagaaatgcacgtgtccgcagggttat
ttgggtcagcattgtgagcagtgcgatcagggattcaggaggagccggccagagctgcga
cgcttcagcacctgcgagcgctgcaactgcaatggacacagcgacacatgtgaccctgag
acaggaatgtgtaactgccagcacaacactgctggtctgagctgtgaaaggtgtaaagac
ggcttctatggtgattctacagtgggctcttcttcagactgtaaagcctgtccctgccct
gccggtgccacctgtgctgtggtgcccaagacgaatgaggtggtctgtaccaactgcccg
actggaaccacaggtaagcgatgtgagctgtgtgacgatggtttctttggagatcctctg
ggtgagaaaggtccagtgagagcgtgtcgagcctgcagctgcaacaacaacatcgacccg
aacgctgtgggcaactgtaaccgagagtcgggcgaatgcctcaagtgcatctacaacacc
gctggcgtcttttgcgaccgctgcaagcagggcttctacggtgatgcccgcgctgctaat
gtagccgacaaatgcaaaccgtgcaagtgttctccatatggtacagtagaccgacagaca
gcctgttctcaggtgacgggtcaatgtccgtgtctccctcacgtcattaacagagactgt
ggcgcttgtgaactgggtttctacaatctgcagagtggaaagggctgtgaacgatgcaac
tgcaaccctattggttccacgaatggtcagtgtgacattgtcagcggtcagtgtgagtgt
cagcctggagtcaccggtcaacattgtgagcgatgcgaggtcaacttcttcggattcagt
tcatcgggttgcaaaccatgtgactgtgacccagaaggctcagaatcagctcagtgtaag
gaggacggccgctgtcattgtcggccaggttttgtgggctctcgctgtgatatgtgtgag
gaaaactacttctacaaccgctcgacacctggctgccagcagtgccctaactgttacagc
ctggtcagagacaaggtaaaccagcagagacaaaaactgcttgacctgcagaatttgatt
gatagtctggacaacactgagacgacagtgagcgacaaggcctttgaggacagactgaag
gaggcagagaaaactataatggacttgctggaagaggctcaggctagcaaagaagtggat
aaaggtcttttggaccgtctaaacaacatcaacaagaccctgaataaccagtggaacaga
ctgcagaacatcaagaacacagtagacaacacaggagcacaggcagacagagcacgaaac
cgcgttcgtgatgcagaaaacctgattaacacagccagagaggagctggacaaagccaaa
gaagccatcagtaaagtggacattaaaatacctacaacctctggagatccaaacaatatg
acgcttctggcagaggaagcccgtaagctgtcagaaaaacacaaagcagatgcagatcag
attgagaagatcgcgaaagatgccaatgacacttctactaaagcctataatatgctgaag
aaagcacttgatggagagaacaagacaagcagcgacattgatgaactcaacaggaagtat
ttggaagcgaaagatctggccaaaaatctggagaagcaggcagctaaagttcatgctgag
gcagaagaggccggaaacaaagctctgaagatctatgctaacctgaccagcttacctcca
atcaacaccaaaacattagaggatgatgccaataagattaaaaaggaggcttcagacttg
gacaaactgatagacaagactgaaaaggagtacaatgacttgagagaagacttgcgagga
aaagagacggaggtccgcaaactgctggacaaaggaaagactgagcaacagacggctgat
cagttgttggcgcgtgcagacgcagcaaaggctttggctgaggaggcggcaaaaaaaggc
aaatctactttccaagaggctcaggatattctgaacaacctcagagatttcgacaagcga
gtgaatgacaacaaaactgctgctgaagatgccatgaggagaatcccacaaatcaatgca
acaatcaatgaagccaatgataaaaccagacgggccgaggcggctttaggcaatgcagct
gctgatgctaaagatgctaaagcgaaggcagaggaagctgagaaaatcgctaatgatgtg
cagaagggttctgcaaagaccaaggcagacgcagaaaaggcttttgaagacaccatgaaa
ctggataaagatgttgacaaaatgatggaccagctcacagcagcggagaaagagctggaa
aagaagaaagcagaggcggacactgacatgatgatggcatctatggcatcagacaatgcc
aaagatgcagagggcaatgccagaaaagccaaaagtgctgtcagagaagtactcaacaca
atcaatgcactgctaggccaactcggtaacatcgataaggtggatctgagcaagctgaat
cagatcgacaacgctctcaaagatgccaaggacaaaatggcgggaagtgagctggacagg
aagctgaaggagctgaacgacatcgccaagagtcaggaggacatgatcagcgactacgac
cgtcagatccaggagattcgagcagacattgccaacctgaacgacatcaagaacactctg
cccgagggctgctttaacacgccgtctctagagcggccataa
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