Danio rerio (zebrafish): 30038
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Entry
30038 CDS
T01004
Symbol
sox19a
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
30038 (sox19a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
30038 (sox19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
30038
NCBI-ProteinID:
NP_570983
ZFIN:
ZDB-GENE-980526-102
Ensembl:
ENSDARG00000010770
UniProt:
P47792
LinkDB
All DBs
Position
5:complement(24856254..24858518)
Genome browser
AA seq
297 aa
AA seq
DB search
MYSMLEHDMKSAVPPTHQSAQGMTQLNGGVTHGSAKPAVNSQQQQSSDPMDKVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDY
KYKPRRKTKPVLKKDNPAAKYPLSAGNLLAAAAAQGSGGSPRMDSYGWGHTGGYPGMQTD
ALGYSQQLHRYDLSALQYPSAMATAQTYMNGANSYNPMSYSSTPQQPSPVMSMVKPEQVS
HSPTGAHSHQRGPLQGDLRDMISMYIPGGDTTDSGAQRGYSNIQQHYLTGTAPLTHI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggagcacgacatgaagtccgccgtgccaccgacgcaccagagcgcg
cagggaatgacccagctgaacggtggagtgacccacggatccgccaaaccggctgtcaac
agccaacaacagcagagtagcgatcctatggacaaagttaagaggcccatgaacgcattt
atggtgtggtctcggggtcagaggcgcaaaatggcacaggagaaccccaaaatgcacaac
tctgaaatcagcaagcgcctgggcgccgagtggaagctgttgacggacgcggagaaacga
ccctttattgatgaagccaagcggcttcgcgcgctgcacatgaaggagtacccagattac
aaatacaaaccccgtcgtaagacgaagcccgtgctgaaaaaggacaacccggctgctaag
tatcctctgtcagccggtaacttactggcggctgccgcggctcaggggtcaggtggaagc
ccgaggatggacagctacggctggggtcacaccggtggttaccctggcatgcagaccgat
gcgctgggttacagtcagcagctgcaccgctacgatctgtccgccctgcagtatccatcc
gccatggccaccgcacagacctacatgaatggtgccaactcctacaaccccatgtcctat
agcagcactccacagcagcccagcccagtcatgtccatggtgaaaccagagcaggtgtct
cattctcccactggagcccacagccaccagcggggtcctttacaaggagacctgagggac
atgattagcatgtatatccctggaggagacaccacagacagtggagcacaaagaggctac
tccaacattcaacagcattacctcaccggtacggcgcctctcacacacatctga
DBGET
integrated database retrieval system
