Danio rerio (zebrafish): 30116 Help Entry 30116             CDS       T01004                                  Symbol ddx3xb Name (RefSeq) DEAD-box helicase 3 X-linked b   KO K11594   ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] Organism dre  Danio rerio (zebrafish) Pathway dre04622   RIG-I-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:dre00001]  09150 Organismal Systems   09151 Immune system    04622 RIG-I-like receptor signaling pathway     30116 (ddx3xb)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dre03019]     30116 (ddx3xb)    03041 Spliceosome [BR:dre03041]     30116 (ddx3xb)    03036 Chromosome and associated proteins [BR:dre03036]     30116 (ddx3xb) Enzymes [BR:dre01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      30116 (ddx3xb) Messenger RNA biogenesis [BR:dre03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      30116 (ddx3xb)    mRNA cycle factors     Common to processing body (P body) and stress granule      30116 (ddx3xb) Spliceosome [BR:dre03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA helicase-like proteins     30116 (ddx3xb) Chromosome and associated proteins [BR:dre03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     30116 (ddx3xb) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII Utp25_C Motif Other DBs NCBI-GeneID:  30116 NCBI-ProteinID:  NP_571016 ZFIN:  ZDB-GENE-980526-150 Ensembl:  ENSDARG00000005774 UniProt:  Q6PBB2 LinkDB All DBs Position 6:59832774..59850404 Genome browser AA seq 688 aa AA seqDB search MSHVAVENVHGLDQQLAALDLSSADVQGVTGRRYIPPHLRNKEAAKNDAPGGWDNGRSNG FVNGYHDGRDNRMNGGSSFAGRGPIRSDRGGRGGFRGFGYDNKEAGGWNVPKDNAYNSFG GRSDRGKSSFFNDRGSSSRGRYERGGFGGGGNSRWVEECRDEDWSKPLPPNERLEHELFS GSNTGINFEKYDDIPVEATGHNGPQPIDRFHDLEMGEIIMGNINLSRYTRPTPVQKHAIP IIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGEALQAAKNSAQENGKYGRRKQYPI SLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLL DMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMFSATFPKE IQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFV ETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARGLDIS NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAKQEVP SWLESLAYEHQHKSSSRGRSKRFSGGFGARDYRQNSSSGGGGFGGRGGRSTGGHGGNRGF GGGKGGFGNFYSSDGYGGNYSQVDWWGN NT seq 2067 nt NT seq  +upstreamnt  +downstreamnt atgagtcatgtggccgtagaaaatgtgcacggtctggaccagcagctggctgccctagac ttgagctccgctgatgttcaaggagtcactggaaggcgctacattccaccacatttaagg aacaaagaagcagctaaaaatgatgctcctggaggatgggataacggacgcagcaatggc ttcgtgaacggctaccatgatggcagagacaaccgcatgaatgggggcagcagtttcgcc gggcgcgggcccatccgcagcgaccgcgggggcagaggaggcttccggggatttggctac gacaacaaagaagcagggggatggaacgtccccaaagacaacgcctacaacagcttcggc gggcgctccgacaggggcaaatcatcgttcttcaatgaccgcgggtcctcatccaggggc cggtatgagcgtggaggtttcggtggcggtggaaacagcagatgggtggaggagtgcagg gatgaagactggtccaaaccactgcctcccaatgagcgcctggaacacgagctgttctct ggcagcaacacggggattaactttgagaaatacgatgacattcctgttgaagcgacgggc cacaacgggccgcagcccatcgaccgcttccatgatttggagatgggggagatcatcatg ggtaatataaacctgagccgatacacacggcccactccggtccagaaacacgcgattccg atcatcaagtctaagagggacctgatggcctgcgcacagaccggctctgggaagacagca gcgttcctgttgccagtgctcagccagatctacactgatggaccaggagaagctctgcag gccgccaagaacagcgcacaggaaaatgggaaatatggccggcgcaagcagtatcccata tcactggtgttagccccgaccagagagctggctctacagatctatgatgaagcccgaaag ttctcgtaccgctctcacgtgcgtccctgtgtggtgtacggcggcgcagacatcggccag cagatccgggatctggagcgcggctgtcatctgctggtggccacgcccgggcgcctgttg gacatgatggagcgcgggaagatcggcctggactactgcaattatctggtgctggatgaa gcggaccggatgctggacatgggcttcgagccgcagatccggcgtatcgtggagcaggac accatgcctccgaaaggcctccgtcagaccatgatgttcagcgccaccttccccaaggag atccagatcctggctcgagacttcctggaggactacatcttcctggcggtgggcagagtg ggctccacctcggagaacatcacgcagaaggtggtgtgggtggaggagaacgacaagcga tcgttcctgttggacctgctgaacgccacaggtaaagactctctgactctggtgtttgtg gagactaagaagggagcggacgcgctggaggacttcctgtaccgagagggttacgcctgc accagcatccatggagaccgctcgcagagggaccgagaggaggcgctgcaccagttccgc tccggcagatgccccatactggtggccacggcggtggccgctcgagggctggatatctcc aatgtgaagcacgtcattaactttgacctgcccagcgacatcgaggagtacgtccaccgc atcggccgcacagggcgtgtgggcaacctgggtcttgccacatccttcttcaatgataag aacggcaacatcaccaaagacctgctggacatcctggtggaggccaaacaggaagtgccg tcgtggctggagagtctggcgtatgagcaccagcacaagagcagcagccgcggacgctcc aagaggttttctggagggtttggagccagagactaccgtcagaacagcagcagtggcggc ggaggcttcgggggccgcggcggacgcagcactggtggacatggagggaaccgaggattt ggcggtggtaagggaggattcggaaacttctacagcagcgacggctacggcggaaactac tcccaggtggactggtgggggaactag

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