Danio rerio (zebrafish): 30117
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Entry
30117 CDS
T01004
Symbol
spi1b
Name
(RefSeq) transcription factor PU.1b isoform 2
KO
K09438
transcription factor PU.1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
30117 (spi1b)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
30117 (spi1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ets
Motif
Other DBs
NCBI-GeneID:
30117
NCBI-ProteinID:
NP_001315297
ZFIN:
ZDB-GENE-980526-164
Ensembl:
ENSDARG00000000767
UniProt:
F1R668
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All DBs
Position
7:complement(32693963..32708681)
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AA seq
266 aa
AA seq
DB search
MLHPYRMEGYIIPPQQTEEMFETEIYRPPMEYQYIIDDSQNDHSWDYNTHHIHPVDFENL
PESHFTELQSVQSLHAASVHRFPDVESSHFMDPGLGSHHIPLTNPQMTYLPRTSVCYPHN
VQPSPLQRSSDEEDPSSRSPPLEVSDEECMRDHISSTTGGEHGNKKKIRLYQFLLDLLRN
GDMKDSIWWVDREKGTFQFSSKHKEVLANRWGIQKGNRKKMTYQKMARALRNYGKTGEVK
KIKKKLTYQFSGEVLGKSHTDRKHYM
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatccgtacagaatggaggggtacatcatcccaccccagcaaacagaggaaatg
tttgaaacagagatctatcgaccaccaatggagtatcagtatatcattgatgacagtcag
aacgatcactcttgggattataacacgcatcacattcatccagtggacttcgagaatctg
ccggagagccactttacagagctacaaagcgtgcagtcactacatgcggccagtgtgcat
cgctttccagatgtggagtccagccatttcatggacccaggcctgggtagccatcacatc
cctctaaccaatccacagatgacttacttgccccggacatcggtgtgttaccctcacaac
gtccagccatctcctctccagcgcagctcagatgaggaagatcccagcagtcgtagtcct
ccattagaggtgtcagatgaggagtgtatgagagaccacatcagctctacaacaggagga
gagcatggtaacaagaagaaaattcgcttgtatcagttcctgcttgaccttctgcgaaat
ggagacatgaaggacagcatctggtgggtggatcgagaaaaaggaacattccagttctca
tccaagcacaaagaggttttagccaaccgatggggcatccagaagggcaatcgcaaaaag
atgacctaccagaagatggcaagagcactgagaaactacggaaagacgggagaagtcaag
aagatcaagaaaaaactcacctaccagttcagtggagaggttctcgggaagagccacaca
gacagaaagcattacatgtaa
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integrated database retrieval system
