KEGG   Danio rerio (zebrafish): 30148
Entry
30148             CDS       T01004                                 
Symbol
desma
Name
(RefSeq) desmin a isoform 2
  KO
K07610  desmin
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04519  Cadherin signaling
dre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    30148 (desma)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    30148 (desma)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dre04812]
    30148 (desma)
Cytoskeleton proteins [BR:dre04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     30148 (desma)
SSDB
Motif
Pfam: Filament Filament_head ZK652 DUF8429 DUF7491 PMD1-like TolA_bind_tri DUF4200 GAS Mis14 ANG-1 COLEC12 ABATE Baculo_PEP_C AAA_13
Other DBs
NCBI-GeneID: 30148
NCBI-ProteinID: NP_001315305
ZFIN: ZDB-GENE-980526-221
Ensembl: ENSDARG00000058656
UniProt: F1R8W3
LinkDB
Position
9:complement(7593139..7616601)
AA seq 488 aa
MSTKYSASAESASSYRRTFGSGLGSSIFAGHGSSGSSGSSRLTSRVYEVTKSSASPHFSS
HRASGSFGGGSVVRSYAGLGEKLDFNLADAINQDFLNTRTNEKAELQHLNDRFASYIEKV
RFLEQQNSALTVEIERLRGREPTRIAELYEEEMRELRRQVEALTNQRSRVEIERDNLVDD
LQKLKLRLQEEIHQKEEAENNLSAFRADVDAATLARLDLERRIEGLHEEIAFLRKIHEEE
IRELQNQMQESQVQIQMDMSKPDLTAALRDIRLQYEAIAAKNISEAEDWYKSKVSDLNQA
VNKNNEALREAKQETMQFRHQLQSYTCEIDSLKGTNESLRRQMSEMEERLGREAGGYQDT
IARLEAEIAKMKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRISLPVQSFSSL
SFRESSPEQHHHQQQQPQRSSEVHSKKTVLIKTIETRDGETRTTSEGMSALSAQRVVSES
TQHQQDVM
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgagcacaaaatattcagcctccgccgagtcggcgtcctcttaccgccgcacctttggc
tcaggtttgggctcctctattttcgccggccacggttcctcaggttcctctggctcctca
agactgacctccagagtttacgaggtgaccaagagctccgcttctccccatttttccagc
caccgtgcgtccggctctttcggaggtggctcggtggtccgttcctacgctggccttggt
gagaagctggatttcaatctggctgatgccataaaccaggacttcctcaacacgcgtact
aatgagaaggccgagctccagcacctcaatgaccgcttcgccagctacatcgagaaggtg
cgcttcctcgagcagcagaactctgccctgacggtggagattgagcgtctgcggggtcgc
gagcccacccgtattgcagagctgtacgaggaggagatgagagagctgcgcagacaggtg
gaggcactgaccaatcagagatcccgtgtggagatcgagagggacaacctagtcgatgac
ctacagaaactgaagctcagacttcaagaggagatccaccagaaagaggaagctgaaaac
aacctttctgctttcagagctgatgtcgatgctgccactctggccaggctggacctggaa
agacgtatcgagggtcttcacgaagagattgcattcctcaggaagattcatgaggaggag
atccgtgagctgcagaaccaaatgcaggagagtcaggtgcaaatccaaatggacatgtcc
aaaccagacctgactgcggccctcagagacattcgcctgcagtacgaggctatcgctgcc
aagaatatcagcgaggccgaggactggtataagtctaaggtttcagatttgaaccaggca
gtgaacaagaataacgaggctctcagagaagccaagcaggagaccatgcagttccgtcac
cagctccagtcctacacctgcgagattgactctctcaagggcaccaatgagtctctgagg
aggcaaatgagtgagatggaggagcggctgggacgtgaggccggtggttatcaggacact
atcgcccgtctcgaggctgagatcgcaaaaatgaaagacgagatggcccgccacctccgc
gagtaccaggatctgctgaatgtgaagatggctctggatgtggagatcgccacctacagg
aagcttttggaaggagaggagagcaggatctcgctgcccgtgcagtccttttcatccctg
agtttcagagagagcagtccagagcagcaccaccaccagcagcagcaaccacaacgctca
tctgaagtccactccaagaaaacagtcctgatcaagaccatcgagacccgcgatggcgag
actaggacaactagtgagggcatgagcgctctcagtgctcagcgtgtcgtcagcgagtcc
acacagcaccagcaggacgtcatgtaa

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