KEGG   Danio rerio (zebrafish): 30234
Entry
30234             CDS       T01004                                 
Symbol
tnn
Name
(RefSeq) tenascin-N precursor
  KO
K06252  tenascin
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04510  Focal adhesion
dre04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    30234 (tnn)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    30234 (tnn)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:dre00536]
    30234 (tnn)
Glycosaminoglycan binding proteins [BR:dre00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   30234 (tnn)
SSDB
Motif
Pfam: Fibrinogen_C fn3 EGF_TEN EGF_Teneurin Ig_DSCAM-DSCAML_C EGF_2 EGF_Tenascin Pur_ac_phosph_N Interfer-bind NDNF DUF4998 SdrD_B EGF hEGF
Other DBs
NCBI-GeneID: 30234
NCBI-ProteinID: NP_571111
ZFIN: ZDB-GENE-990415-262
Ensembl: ENSDARG00000024829
UniProt: B0S6K5
LinkDB
Position
2
AA seq 932 aa
MAVRLNRLKRGLFLLGTLFMVSHIVLSEEAVNAEKEVTFSHVYRIDSSCKQGSQVGQLSQ
DQASEGQLVTVNGENDIVFKHSIRLQPAGCGCADSEDFKALLYRVNGLEEEVNYLKSQCA
QGCCKGGAGVDTSCSGHGTYQQDSCSCKCNPGWEGPDCSISSCPDECNDNGRCVDGRCVC
YEGYTGHDCSQLTCPNDCKDKGHCVDGKCVCFSGFSGEDCSIATCPNDCIGNGRCVDGQC
ICDEGFFGIDCSMVLGPKGLRLIKVTDVSLLVEWESVRGAEYYILSYHPKGNKGAIKEVQ
VENTKNSYLITGLKPGVTYIVQVYAVIRGINSESDQITATTEVSGIEGIKVLSQTEDSIQ
VDWKNPGIIVDYFKLTHASHDGQGGHENVVMSQEARTKHTIVGLNPGTEYQIGVQAIKGE
NEGKASFATGVTDIDAPTNLATREVTENSATVTWDGVRAEIDGYMLTYSSAEGTSREIKV
AAGATSYQLTSLKPGVLYTVFLWAYKGSRSSRKSMTEAETDIDAPTNLMTREVTEDSASV
TWNKVQADIDGYMLKYSSLDGSGQEVRVGADSTSYRFTGLKPGVLYTVYVWAIKGARSSK
KSSTEAETEIDAPKNLKATDVQTQTSTLTWKAPQANIEGYILTYRAEDGSMQTVEKTLTA
RENRFALSGLEMGKKYIVTLIAYRGSKRSKIVETTFSTVGLAYQFPMDCTQIMRNGNMES
GVYTIYVNNNRSRTMQVYCDMKTDGGGWIVFQRRNTGKVDFMKKWRDYMKGFGELTEEFW
LGLDKIHELTNTPTQYEARFDLGSGSDRKYAVYDNFKVAPSKQKFKLTIGSYKGNAGDAM
TYHQGAPFSTVDSDNDIALGNCALTHQGAWWYKNCHLANLNGRFGDNRHSMGVNWEPWKG
HLQSLDFAEIKIRPVGAAGRQKRSLKRRVAAY
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggccgttagattaaaccggctgaaaagaggcctttttctactggggacgctctttatg
gtgtcccatattgtgctctcagaggaggcggtgaatgcagagaaagaagtcactttcagc
cacgtctacaggattgactccagttgtaagcagggttctcaagtaggtcaactttcccag
gaccaggcctcagaaggacagttagtcacagtgaatggagagaatgacattgtcttcaag
cacagcatacgcctccagccggccggttgtggatgtgcagattcggaggatttcaaagct
ctgctgtaccgtgtaaatggcctggaggaggaagtcaactacttaaagagccagtgcgct
cagggctgctgcaaaggaggggcaggtgtggacactagctgcagtgggcatggcacctat
caacaggactcctgcagttgtaaatgtaacccaggttgggagggtccagactgctccatc
tcatcctgccctgatgaatgcaatgacaacggccgctgtgttgacggacgctgcgtatgc
tatgaaggctacactggtcatgactgcagccagctcacctgccccaacgactgcaaagat
aaaggccactgtgtggatgggaaatgcgtgtgcttcagtggattctcaggagaagactgc
agtattgccacctgtcccaatgactgcataggaaatggacgctgcgtggatgggcagtgc
atctgcgatgagggcttctttggaatcgactgctccatggttctaggaccaaaaggcctc
cgtctgatcaaagtcacagatgtgtctctgttggtggagtgggagtctgtgagaggagcc
gagtactacatcctgtcctaccatccaaagggaaacaagggagccattaaagaggtccag
gtggaaaacacgaaaaactcctacctaatcacaggcctcaaacctggagtcacgtacata
gtgcaggtgtacgctgtcatcaggggcattaatagtgaatctgaccaaataacggccaca
accgaggtctctggtattgaaggaatcaaggtgctgagccagacagaagactccatccag
gtggactggaagaatcctggaattattgtggactactttaaactgacccatgcaagtcat
gatggccagggaggacatgagaacgtggtgatgagccaggaggccagaaccaagcacacc
atcgtaggtctcaaccctggaacagaatatcagataggagtgcaagcgatcaaaggtgaa
aatgaaggcaaggcatcgtttgctacaggggtcacagacatcgatgccccaacaaatcta
gcaaccagggaggtgacggaaaactctgcgactgtgacatgggacggtgtccgcgctgaa
atcgatggctacatgctgacttacagctcggcagagggcaccagccgagaaattaaagtg
gcagcgggtgccacatcttaccagctgacctctctgaagccaggagtcctgtacacagtt
ttcctctgggcctataagggctctcgttccagcaggaagagcatgactgaggctgagacg
gacatagatgctcctactaacctcatgaccagggaagtgacagaggactcagcttcggtg
acgtggaacaaggtgcaggctgacattgatggctacatgctgaaatacagctctctagac
ggctccggccaggaggttcgagtaggagctgacagcacctcctacaggttcacgggtctc
aagcctggtgttctctacacagtctatgtgtgggccatcaaaggcgctcgctctagcaaa
aagagttcaacagaagcggaaacagagattgatgcccccaagaatctcaaagccactgat
gttcagactcaaacctccactctaacatggaaagcacctcaggctaatattgaaggctac
atcttgacctacagggctgaagacggcagcatgcagactgtggaaaaaacgttgactgca
cgagagaacagatttgctctctcaggccttgaaatgggaaagaagtacattgtcaccctt
attgcctacagaggctcaaagaggagtaaaatagtggagacaacattcagtacagttggt
ctggcctatcagttcccgatggactgtactcagatcatgaggaatgggaacatggagagt
ggcgtgtacacaatctacgtcaataacaaccgcagcagaaccatgcaggtgtactgtgac
atgaaaactgatggcggcggttggattgtcttccagagaagaaacacaggcaaagtagat
ttcatgaagaaatggagagactacatgaaaggctttggggaactgacagaagaattctgg
cttggcttggacaagatccacgaactgaccaacactccaacacagtatgaggcgcgtttt
gatctgggctcaggatcagatcggaaatatgctgtctatgataacttcaaagtagctcca
tccaaacagaagttcaaacttaccattggcagctacaagggaaatgctggtgacgccatg
acctaccaccagggggcgcctttctccacggtcgattcagacaatgacattgctcttggg
aactgtgctttaacccaccaaggtgcgtggtggtacaaaaactgccatctggccaatctc
aacggcagatttggggacaacagacacagcatgggtgtaaactgggagccatggaagggg
catctccagtctctggactttgcagagattaagatccggccagtgggagcagcaggcaga
cagaagagatcactcaagagaagagtagcagcatattaa

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