Danio rerio (zebrafish): 30234
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Entry
30234 CDS
T01004
Symbol
tnn
Name
(RefSeq) tenascin-N precursor
KO
K06252
tenascin
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04510
Focal adhesion
dre04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
30234 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
30234 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dre00536
]
30234 (tnn)
Glycosaminoglycan binding proteins [BR:
dre00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
30234 (tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_TEN
EGF_Teneurin
Ig_DSCAM-DSCAML_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
Interfer-bind
NDNF
DUF4998
SdrD_B
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
30234
NCBI-ProteinID:
NP_571111
ZFIN:
ZDB-GENE-990415-262
Ensembl:
ENSDARG00000024829
UniProt:
B0S6K5
LinkDB
All DBs
Position
2
Genome browser
AA seq
932 aa
AA seq
DB search
MAVRLNRLKRGLFLLGTLFMVSHIVLSEEAVNAEKEVTFSHVYRIDSSCKQGSQVGQLSQ
DQASEGQLVTVNGENDIVFKHSIRLQPAGCGCADSEDFKALLYRVNGLEEEVNYLKSQCA
QGCCKGGAGVDTSCSGHGTYQQDSCSCKCNPGWEGPDCSISSCPDECNDNGRCVDGRCVC
YEGYTGHDCSQLTCPNDCKDKGHCVDGKCVCFSGFSGEDCSIATCPNDCIGNGRCVDGQC
ICDEGFFGIDCSMVLGPKGLRLIKVTDVSLLVEWESVRGAEYYILSYHPKGNKGAIKEVQ
VENTKNSYLITGLKPGVTYIVQVYAVIRGINSESDQITATTEVSGIEGIKVLSQTEDSIQ
VDWKNPGIIVDYFKLTHASHDGQGGHENVVMSQEARTKHTIVGLNPGTEYQIGVQAIKGE
NEGKASFATGVTDIDAPTNLATREVTENSATVTWDGVRAEIDGYMLTYSSAEGTSREIKV
AAGATSYQLTSLKPGVLYTVFLWAYKGSRSSRKSMTEAETDIDAPTNLMTREVTEDSASV
TWNKVQADIDGYMLKYSSLDGSGQEVRVGADSTSYRFTGLKPGVLYTVYVWAIKGARSSK
KSSTEAETEIDAPKNLKATDVQTQTSTLTWKAPQANIEGYILTYRAEDGSMQTVEKTLTA
RENRFALSGLEMGKKYIVTLIAYRGSKRSKIVETTFSTVGLAYQFPMDCTQIMRNGNMES
GVYTIYVNNNRSRTMQVYCDMKTDGGGWIVFQRRNTGKVDFMKKWRDYMKGFGELTEEFW
LGLDKIHELTNTPTQYEARFDLGSGSDRKYAVYDNFKVAPSKQKFKLTIGSYKGNAGDAM
TYHQGAPFSTVDSDNDIALGNCALTHQGAWWYKNCHLANLNGRFGDNRHSMGVNWEPWKG
HLQSLDFAEIKIRPVGAAGRQKRSLKRRVAAY
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggccgttagattaaaccggctgaaaagaggcctttttctactggggacgctctttatg
gtgtcccatattgtgctctcagaggaggcggtgaatgcagagaaagaagtcactttcagc
cacgtctacaggattgactccagttgtaagcagggttctcaagtaggtcaactttcccag
gaccaggcctcagaaggacagttagtcacagtgaatggagagaatgacattgtcttcaag
cacagcatacgcctccagccggccggttgtggatgtgcagattcggaggatttcaaagct
ctgctgtaccgtgtaaatggcctggaggaggaagtcaactacttaaagagccagtgcgct
cagggctgctgcaaaggaggggcaggtgtggacactagctgcagtgggcatggcacctat
caacaggactcctgcagttgtaaatgtaacccaggttgggagggtccagactgctccatc
tcatcctgccctgatgaatgcaatgacaacggccgctgtgttgacggacgctgcgtatgc
tatgaaggctacactggtcatgactgcagccagctcacctgccccaacgactgcaaagat
aaaggccactgtgtggatgggaaatgcgtgtgcttcagtggattctcaggagaagactgc
agtattgccacctgtcccaatgactgcataggaaatggacgctgcgtggatgggcagtgc
atctgcgatgagggcttctttggaatcgactgctccatggttctaggaccaaaaggcctc
cgtctgatcaaagtcacagatgtgtctctgttggtggagtgggagtctgtgagaggagcc
gagtactacatcctgtcctaccatccaaagggaaacaagggagccattaaagaggtccag
gtggaaaacacgaaaaactcctacctaatcacaggcctcaaacctggagtcacgtacata
gtgcaggtgtacgctgtcatcaggggcattaatagtgaatctgaccaaataacggccaca
accgaggtctctggtattgaaggaatcaaggtgctgagccagacagaagactccatccag
gtggactggaagaatcctggaattattgtggactactttaaactgacccatgcaagtcat
gatggccagggaggacatgagaacgtggtgatgagccaggaggccagaaccaagcacacc
atcgtaggtctcaaccctggaacagaatatcagataggagtgcaagcgatcaaaggtgaa
aatgaaggcaaggcatcgtttgctacaggggtcacagacatcgatgccccaacaaatcta
gcaaccagggaggtgacggaaaactctgcgactgtgacatgggacggtgtccgcgctgaa
atcgatggctacatgctgacttacagctcggcagagggcaccagccgagaaattaaagtg
gcagcgggtgccacatcttaccagctgacctctctgaagccaggagtcctgtacacagtt
ttcctctgggcctataagggctctcgttccagcaggaagagcatgactgaggctgagacg
gacatagatgctcctactaacctcatgaccagggaagtgacagaggactcagcttcggtg
acgtggaacaaggtgcaggctgacattgatggctacatgctgaaatacagctctctagac
ggctccggccaggaggttcgagtaggagctgacagcacctcctacaggttcacgggtctc
aagcctggtgttctctacacagtctatgtgtgggccatcaaaggcgctcgctctagcaaa
aagagttcaacagaagcggaaacagagattgatgcccccaagaatctcaaagccactgat
gttcagactcaaacctccactctaacatggaaagcacctcaggctaatattgaaggctac
atcttgacctacagggctgaagacggcagcatgcagactgtggaaaaaacgttgactgca
cgagagaacagatttgctctctcaggccttgaaatgggaaagaagtacattgtcaccctt
attgcctacagaggctcaaagaggagtaaaatagtggagacaacattcagtacagttggt
ctggcctatcagttcccgatggactgtactcagatcatgaggaatgggaacatggagagt
ggcgtgtacacaatctacgtcaataacaaccgcagcagaaccatgcaggtgtactgtgac
atgaaaactgatggcggcggttggattgtcttccagagaagaaacacaggcaaagtagat
ttcatgaagaaatggagagactacatgaaaggctttggggaactgacagaagaattctgg
cttggcttggacaagatccacgaactgaccaacactccaacacagtatgaggcgcgtttt
gatctgggctcaggatcagatcggaaatatgctgtctatgataacttcaaagtagctcca
tccaaacagaagttcaaacttaccattggcagctacaagggaaatgctggtgacgccatg
acctaccaccagggggcgcctttctccacggtcgattcagacaatgacattgctcttggg
aactgtgctttaacccaccaaggtgcgtggtggtacaaaaactgccatctggccaatctc
aacggcagatttggggacaacagacacagcatgggtgtaaactgggagccatggaagggg
catctccagtctctggactttgcagagattaagatccggccagtgggagcagcaggcaga
cagaagagatcactcaagagaagagtagcagcatattaa
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