Danio rerio (zebrafish): 30263
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Entry
30263 CDS
T01004
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
30263 (ddx4)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
30263 (ddx4)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Gene silencing
piRNA pathway
30263 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
30263
NCBI-ProteinID:
NP_571132
ZFIN:
ZDB-GENE-990415-272
Ensembl:
ENSDARG00000014373
UniProt:
O42107
LinkDB
All DBs
Position
10:6884151..6905574
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AA seq
716 aa
AA seq
DB search
MDDWEEDQSPVVSCSSGFGLGSNGSDGGFKSFYTGGAGNDKSNSEGTEGSSWKMTGDSFR
GRGGRGGSRGGRGGFSGFKSEIDENGSDGGWNGGESRGRGRGGFRGGFRSGSRDENDENR
NDDGWKGGESRGRGRGGFGGSFRGGFRDGGNEDTGRRGFGRENNENGNDEGGEGRGRGRG
GFRGGFRDGGGDESGKRGFGRGGFRGRNEEVFSKVTTADKLDQEGSENAGPKVVYVPPPP
PEEESSIFSHYATGINFDKYDDILVDVSGSNPPKAIMTFEEAGLCDSLSKNVSKSGYVKP
TPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQRFMTDGVAASKFSEIQEPEAIIV
APTRELINQIYLEARKFAYGTCVRPVVVYGGINTGYTIREVLKGCNVLCATPGRLHDLIG
RGKIGLSKVRYLVLDEADRMLDMGFEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRM
AADFLKVDYIFLAVGVVGGACSDVEQTVVQVDQYSKRDQLLELLRATGNERTMVFVETKR
SADFIATFLCQEKISTTSIHGDREQREREKALSDFRLGHCPVLVATSVAARGLDIEQVQH
VVNFDMPSSIDEYVHRIGRTGRCGNTGRAVSFFNPESDTPLARSLVKVLSGAQQVVPKWL
EEVAFSAHGTTGFNPRGKVFASTDSRKGGSFKSDEPPPSQTSAPSAAAAADDEEWE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggatgactgggaggaagatcagagtcccgttgtgtcttgcagctcaggatttggtcta
ggctcaaatggttctgatggaggattcaagagcttttatacaggaggtgctggaaatgac
aagtcaaacagtgaaggtactgaaggtagctcatggaaaatgactggtgattcgttcagg
gggagaggaggcaggggaggatcacgaggaggcagaggaggctttagcggttttaaatca
gaaattgatgagaatggcagcgatggaggttggaacggaggtgaaagtcgaggaagagga
cgcggtggtttccgtggtggttttcgcagtggctcccgtgatgaaaatgatgaaaataga
aatgatgatggttggaaaggaggtgaaagccgaggtagaggtcgaggtggtttcgggggt
agttttcgtggaggtttccgtgatggtggtaatgaagacactgggagaagaggctttgga
agagaaaataatgaaaatggaaacgatgagggaggagaaggcagaggaagaggtcgtggt
ggtttccggggtggttttcgtgatggtggtggtgatgagagtggaaaaagaggcttcgga
agaggaggttttagaggccggaatgaggaagtattttccaaggtcacaactgcagacaag
ttggatcaagaaggaagtgaaaatgcaggacccaaggttgtttatgtgccgccgcctcct
ccagaggaggagagctcgatattctcccattatgcaacaggcattaattttgacaaatat
gatgatattcttgtggacgtgagtggcagcaatcctccaaaagcaattatgacttttgag
gaagcaggactttgtgactcactgagcaaaaatgtatcaaagtctggatatgtgaagcct
acacctgttcagaaacatggcattcccatcatttcagctggacgggatctaatggcttgt
gctcagactggatcaggaaaaacggcggccttcctgctgcctatcctacagcgctttatg
actgatggtgtggcagccagcaagttcagtgagatacaggagcctgaggccataatcgtg
gctcccaccagagaacttatcaatcagatctatctggaggccaggaagtttgcatacggg
acctgtgtacgacctgttgtggtttatggaggtataaatactggatatactatccgagag
gtgttaaagggctgcaatgttctgtgtgctactcctggaagattgcatgacctcattggt
cgtggaaagattggcctgagtaaagtgcgctatctagttctggatgaagcagacagaatg
ctggacatgggctttgagccagaaatgcgcaaactggtggcgtctcctggtatgccttca
aaagaggaacgacaaaccctcatgttcagtgccacctaccctgaagatattcaaagaatg
gctgctgactttcttaaagtggactatattttccttgctgttggtgtggtgggtggagca
tgcagtgatgtggagcaaaccgttgttcaggtggaccagtactcaaagagggaccagctg
cttgaattgctcagagcaacaggtaatgagcgcacaatggtttttgtggaaaccaaaaga
agtgctgatttcatagcaacatttctctgtcaagagaagatctcaaccacaagcatccat
ggtgatcgggaacagcgagagcgagagaaagctctcagtgattttcgccttggccactgt
ccggttctggtcgccacatctgtagctgctagaggcctggatattgagcaagtccagcat
gttgtgaattttgacatgcccagcagcatcgatgagtatgtccatcgcataggaagaact
ggacgctgtgggaacaccggtcgcgccgtgtccttttttaacccagagtctgacactcca
ctagctcgctccctggtcaaagtcctttcaggggcccaacaagtagttccaaaatggctg
gaggaagttgccttcagtgctcatggcacaacaggcttcaacccacgtggaaaggtgttt
gcatctacagactcgcggaagggaggatcctttaagagcgatgagccgccaccatcacaa
acatctgccccgagcgcagcagctgctgcagacgatgaggaatgggaataa
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