KEGG   Danio rerio (zebrafish): 30288
Entry
30288             CDS       T01004                                 
Symbol
her6
Name
(RefSeq) hairy-related 6
  KO
K06054  hairy and enhancer of split 1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03460  Fanconi anemia pathway
dre04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    30288 (her6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    30288 (her6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    30288 (her6)
   03400 DNA repair and recombination proteins [BR:dre03400]
    30288 (her6)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    30288 (her6)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     30288 (her6)
SSDB
Motif
Pfam: Hairy_orange HLH Spectrin_1st_PEPL bHLH_NCOA
Other DBs
NCBI-GeneID: 30288
NCBI-ProteinID: NP_571154
ZFIN: ZDB-GENE-980526-144
Ensembl: ENSDARG00000006514
UniProt: Q6PBX3
LinkDB
Position
6:complement(36551083..36552768)
AA seq 270 aa
MPADIMEKNSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPTQHQIPAGPPHPSFSQPMVQIPSA
TQQANVVPLSGVPCKSGSSSNLTSDATKVYGGFQLVPATDGQFAFLIPNAAFAPNGPVIP
VYANNSNTPVPVAVSPGAPSVTSDSVWRPW
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcctgccgatatcatggaaaaaaactcctcttctccggtcgccgcgactccggcgagc
atgaacactacacctgataaacccaaaacggcttcggaacacagaaagtcttctaaaccc
attatggagaaaagaagaagagcgagaatcaacgaaagcttgggtcagctgaaaacgtta
atcttggatgctctgaaaaaagatagctccagacactctaaacttgagaaagccgacatc
ctggagatgacagtgaaacatctcagaaacatgcagcgcgcacaaatgaccgctgcccta
aacacagatcccaccgttcttgggaagtaccgagctggattcagtgaatgcatgaacgag
gttacccggttcctgtccacatgtgaaggggttaacaccgaggtcaggactaggctgcta
ggtcacctagccagctgcatgacacagatcaacgccatgaactatccaacacagcaccag
atacctgccgggcctcctcatccatccttcagtcaacccatggttcagatccccagcgcg
actcagcaagccaacgttgtgcctcttagcggagtcccctgcaaaagcggctcatcctcc
aacttgacttctgacgcaactaaagtatatgggggtttccagcttgtgccggcaaccgac
ggacagttcgcctttttgattcccaacgctgcctttgctccaaacggccctgttattcca
gtctacgcaaacaattccaacacaccggttccggtggccgtttctccgggagcaccgtcc
gtcacgtcagactccgtttggcggccttggtag

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