Danio rerio (zebrafish): 30288
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Entry
30288 CDS
T01004
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03460
Fanconi anemia pathway
dre04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
30288 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
30288 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
30288 (her6)
03400 DNA repair and recombination proteins [BR:
dre03400
]
30288 (her6)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
30288 (her6)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
30288 (her6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
30288
NCBI-ProteinID:
NP_571154
ZFIN:
ZDB-GENE-980526-144
Ensembl:
ENSDARG00000006514
UniProt:
Q6PBX3
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All DBs
Position
6:complement(36551083..36552768)
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AA seq
270 aa
AA seq
DB search
MPADIMEKNSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPTQHQIPAGPPHPSFSQPMVQIPSA
TQQANVVPLSGVPCKSGSSSNLTSDATKVYGGFQLVPATDGQFAFLIPNAAFAPNGPVIP
VYANNSNTPVPVAVSPGAPSVTSDSVWRPW
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatatcatggaaaaaaactcctcttctccggtcgccgcgactccggcgagc
atgaacactacacctgataaacccaaaacggcttcggaacacagaaagtcttctaaaccc
attatggagaaaagaagaagagcgagaatcaacgaaagcttgggtcagctgaaaacgtta
atcttggatgctctgaaaaaagatagctccagacactctaaacttgagaaagccgacatc
ctggagatgacagtgaaacatctcagaaacatgcagcgcgcacaaatgaccgctgcccta
aacacagatcccaccgttcttgggaagtaccgagctggattcagtgaatgcatgaacgag
gttacccggttcctgtccacatgtgaaggggttaacaccgaggtcaggactaggctgcta
ggtcacctagccagctgcatgacacagatcaacgccatgaactatccaacacagcaccag
atacctgccgggcctcctcatccatccttcagtcaacccatggttcagatccccagcgcg
actcagcaagccaacgttgtgcctcttagcggagtcccctgcaaaagcggctcatcctcc
aacttgacttctgacgcaactaaagtatatgggggtttccagcttgtgccggcaaccgac
ggacagttcgcctttttgattcccaacgctgcctttgctccaaacggccctgttattcca
gtctacgcaaacaattccaacacaccggttccggtggccgtttctccgggagcaccgtcc
gtcacgtcagactccgtttggcggccttggtag
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integrated database retrieval system