Danio rerio (zebrafish): 30432
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Entry
30432 CDS
T01004
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1
KO
K13129
survival motor neuron protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
30432 (smn1)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
30432 (smn1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
TUDOR
SH3_19
Motif
Other DBs
NCBI-GeneID:
30432
NCBI-ProteinID:
NP_571266
ZFIN:
ZDB-GENE-990715-16
Ensembl:
ENSDARG00000018494
UniProt:
Q9W6S8
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All DBs
Position
5:complement(43798348..43805610)
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AA seq
281 aa
AA seq
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MANGAEDVVFCRGTGQSDDSDIWDDTALIKAYDKAVASFKNALKGEDGATPQENDNPGKK
RKNNKKNKSRKRCNAAPDKEWQVGDSCYAFWSEDGNLYTATITSVDQEKGTCVVFYTDYG
NEEEQNLSDLLTEPPDMDEDALKTANVKETESSTEESDRSFTPQKSGHAKHKSKSNFPMG
PPSWFPSFPPGPPPPPPHFKKMDGRRGEGPGPSFPGWPPMIPLGPPMIPPPPPMSPDFGE
DDEALGSMLISWYMSGYHTGYYMGLRQGRKEAAASKKSHRK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggccaatggtgcagaagatgtcgtattttgtcgtgggactggtcaaagtgatgattct
gacatttgggatgatacagctttgattaaagcatacgataaagctgttgcatcattcaag
aatgctttgaaaggtgaggatggggcgaccccacaagaaaacgacaacccagggaagaag
aggaaaaacaacaaaaagaataagagcaggaagagatgcaacgcagcaccggataaagag
tggcaggttggagactcctgttatgcgttctggtctgaagatggcaacctgtacactgcc
accattacctcagtcgaccaggagaagggcacctgtgtggtcttttacacagattatgga
aatgaggaggagcagaacctcagtgaccttctgactgagcctccagacatggatgaagat
gctctgaagacagcaaatgtcaaagaaacagagtcctccacagaagagagtgatcgctct
ttcaccccacagaagtccggtcatgcaaagcacaaatctaaaagcaattttcctatggga
cccccatcatggtttcccagtttcccacctggaccgccaccaccaccaccccactttaaa
aagatggatggcagacgaggagaaggtcctggtccttcctttcctggatggcctcccatg
attccactcggtccaccgatgatcccaccaccgccacctatgagtccagactttggggag
gacgacgaggctttgggcagtatgctgatttcctggtatatgagcggctatcacactgga
tactatatgggtttaagacagggccgtaaagaggctgctgcatccaagaaatcgcatcgg
aaataa
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