KEGG   Danio rerio (zebrafish): 30432
Entry
30432             CDS       T01004                                 
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1
  KO
K13129  survival motor neuron protein
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    30432 (smn1)
Spliceosome [BR:dre03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    30432 (smn1)
SSDB
Motif
Pfam: SMN_YG-box SMN_Tudor SMN_G2-BD TUDOR SH3_19
Other DBs
NCBI-GeneID: 30432
NCBI-ProteinID: NP_571266
ZFIN: ZDB-GENE-990715-16
Ensembl: ENSDARG00000018494
UniProt: Q9W6S8
LinkDB
Position
5:complement(43798348..43805610)
AA seq 281 aa
MANGAEDVVFCRGTGQSDDSDIWDDTALIKAYDKAVASFKNALKGEDGATPQENDNPGKK
RKNNKKNKSRKRCNAAPDKEWQVGDSCYAFWSEDGNLYTATITSVDQEKGTCVVFYTDYG
NEEEQNLSDLLTEPPDMDEDALKTANVKETESSTEESDRSFTPQKSGHAKHKSKSNFPMG
PPSWFPSFPPGPPPPPPHFKKMDGRRGEGPGPSFPGWPPMIPLGPPMIPPPPPMSPDFGE
DDEALGSMLISWYMSGYHTGYYMGLRQGRKEAAASKKSHRK
NT seq 846 nt   +upstreamnt  +downstreamnt
atggccaatggtgcagaagatgtcgtattttgtcgtgggactggtcaaagtgatgattct
gacatttgggatgatacagctttgattaaagcatacgataaagctgttgcatcattcaag
aatgctttgaaaggtgaggatggggcgaccccacaagaaaacgacaacccagggaagaag
aggaaaaacaacaaaaagaataagagcaggaagagatgcaacgcagcaccggataaagag
tggcaggttggagactcctgttatgcgttctggtctgaagatggcaacctgtacactgcc
accattacctcagtcgaccaggagaagggcacctgtgtggtcttttacacagattatgga
aatgaggaggagcagaacctcagtgaccttctgactgagcctccagacatggatgaagat
gctctgaagacagcaaatgtcaaagaaacagagtcctccacagaagagagtgatcgctct
ttcaccccacagaagtccggtcatgcaaagcacaaatctaaaagcaattttcctatggga
cccccatcatggtttcccagtttcccacctggaccgccaccaccaccaccccactttaaa
aagatggatggcagacgaggagaaggtcctggtccttcctttcctggatggcctcccatg
attccactcggtccaccgatgatcccaccaccgccacctatgagtccagactttggggag
gacgacgaggctttgggcagtatgctgatttcctggtatatgagcggctatcacactgga
tactatatgggtttaagacagggccgtaaagaggctgctgcatccaagaaatcgcatcgg
aaataa

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