Danio rerio (zebrafish): 30520
Help
Entry
30520 CDS
T01004
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
30520 (irx3a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
30520 (irx3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
30520
NCBI-ProteinID:
NP_001307054
ZFIN:
ZDB-GENE-991119-5
Ensembl:
ENSDARG00000101076
UniProt:
Q90Z68
LinkDB
All DBs
Position
7:36041491..36044827
Genome browser
AA seq
454 aa
AA seq
DB search
MSFPQLGYQYIRPIYSQDRQGIGSARAGTDLSPSGALSNVLSTMYGSPFAAAQSYGAFLP
YSNDLSIFNQLGAQYELKDSPGVQHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRSRTDEE
GNVYNSDHEGDDGDKREDEEEIDLENIDTENIENKDDLDEQDELHSDLKLDGRSDSEISD
GYEDLQGPEQRLFKAMVKDGKEIHGDRAEHFHHHSHHHHLHHNSLEQANGEPVKINQAII
NSPPSENNPPPAPKPKIWSLAETATTPDNPRKSPLMNGTSAASATQTIITPHRLLSCPVG
KIQSWTNRGFTAHQLALLNSNHYLGLSNQASANGLALYSRQAEDRSQNSESTVTERSSAL
EAEKKLLKTAFHPVQRRPQNQLEAAMVLSALSSS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagctgggatatcagtacatccgacccatatactcgcaggacaggcag
gggataggcagtgcccgagccgggacagacctgagcccgtccggggcgctctctaatgtt
ctctctactatgtacggatcacctttcgcagccgcacaaagctatggagcttttcttcct
tattcaaatgatctgtccattttcaaccaactgggagcacagtacgagttaaaggacagc
ccgggcgtccagcatcctggatttgctcaccatcatcctgctttttatccatatggtcag
taccagttcggagacccttccagacccaaaaatgccaccagagagagcaccagcacgctt
aaggcctggctaagcgagcaccggaaaaacccatatcctaccaaaggcgagaagatcatg
ctggccatcatcactaaaatgaccctcactcaagtgtccacctggttcgctaacgccagg
aggaggctaaagaaggagaacaagatgacctggaccccacggagtcgcacggacgaggaa
ggaaatgtttacaacagcgatcacgagggggatgacggagacaaacgcgaggacgaggag
gaaatcgatttggagaatatcgacacggagaatattgagaataaggacgatttagacgag
caggacgaactgcattctgatttgaaactggatggcaggagtgactcagaaatttcagac
ggctatgaggatttacaagggccggagcaaagattgttcaaagcgatggtgaaagacggt
aaagaaattcacggcgaccgcgcagagcactttcaccatcacagtcatcaccatcacctc
caccacaacagcttagaacaggccaacggcgaaccggtcaaaatcaaccaggccattatc
aactctccgccctcagaaaacaacccacctccggctccaaaacctaagatctggtctttg
gcagagaccgccacaactccagacaatccacgaaaatctcctctgatgaacgggacttcc
gctgcgtcggccactcagaccatcatcactccacatagactcctttcgtgtcccgtaggg
aaaatccagagctggacaaatcggggtttcaccgcacaccagctcgccttgctgaactct
aaccactacttaggactcagtaaccaggcttcggcgaatggccttgccctgtacagcaga
caagcagaggacaggagtcaaaactccgagtccacagtcacagaaagatctagtgccttg
gaagcagaaaaaaagttgttaaaaacagccttccatcctgttcaaagacggccccagaac
caactcgaagctgccatggttttatccgccctctcgtcctcgtag
DBGET
integrated database retrieval system
