KEGG   Danio rerio (zebrafish): 30527
Entry
30527             CDS       T01004                                 
Symbol
msx1a
Name
(RefSeq) homeobox protein MSX-1a
  KO
K09341  homeobox protein MSX
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    30527 (msx1a)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: NKL
    30527 (msx1a)
SSDB
Motif
Pfam: Homeodomain Homeobox_KN HTH_NDX
Other DBs
NCBI-GeneID: 30527
NCBI-ProteinID: NP_571348
ZFIN: ZDB-GENE-980526-312
Ensembl: ENSDARG00000116118
UniProt: Q90455
LinkDB
Position
14:complement(92706..94594)
AA seq 233 aa
MAPVVTMSSQAAEEDAGVMLAGQTEMQTRVTVQEDAQRPKILPFSVEALMADRRPNRGSP
DADARLGFSVEVLQLPVKAESPERSTWVPRARFSPSRLSPPACPLRKHKTNRKPRTPFST
AQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKMA
AKPLLPPAFGISFPAGAHIPAYSAGSHPFHRHSANVSPVGLYTHMGYSMYHLA
NT seq 702 nt   +upstreamnt  +downstreamnt
atggccccagtggtcaccatgagttcccaagctgcagaggaggatgccggagtgatgctg
gccggtcaaacggagatgcagacccgcgtcactgtgcaggaggacgcgcaaagaccgaag
attctcccgtttagcgttgaagctctgatggcggaccgtaaaccgagccgcgggtcacca
gatgcggatgcgcgcctggcgttttcggtggaggttctgcagctgccggtgaaggcggag
agcccggagcggagcacatgggtaccggcggcccgcttctcccccagtcgtctcagtcct
cccgcgtgccctctgagaaaacacaaaaccaaccggaagccgcggacaccgttcagcacg
gcgcagctgctggcgctggagcggaaatttcggcagaaacagtacctgtccatcgccgag
cgggccgagttctccagctccctcagcctgacggagacccaggtcaagatctggttccag
aacaggcgggcgaaggccaaacggctgcaggaggccgagctggagaagctgaagatggcc
gccaaacccctgcttcctccagctttcgggatttcgtttcccgccggcgcccacatcccg
gcttactccgccggatcacacccgtttcacagacactccgcgaatgtgagcccggtcgga
ctgtacacacacatgggatacagcatgtaccatttagcataa

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