Danio rerio (zebrafish): 30529
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Entry
30529 CDS
T01004
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
30529 (sox3)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
30529 (sox3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
30529
NCBI-ProteinID:
NP_001001811
ZFIN:
ZDB-GENE-980526-333
Ensembl:
ENSDARG00000053569
UniProt:
Q6EJB7
A9JSZ3
LinkDB
All DBs
Position
14:complement(37286151..37287914)
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AA seq
300 aa
AA seq
DB search
MYNMMETEIKSPIPQSNTGSVTGGKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNAVSVGQRMDYTHMNGWTNSAYSLMQDQLAYPQHPSMNSPQIQQMH
RYDMAGLQYPMMSTAQTYMNAASTYSSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDSADHSSLQTSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagattaaaagccccattccgcagtccaacacgggctcg
gtgacgggcggcaaaaacaacagtgccaacgaccaggaccgggtgaagcggcctatgaat
gctttcatggtgtggtctcgcgggcagcggaggaagatggctcaggagaatcctaaaatg
cacaactcggagatcagcaagcgcctcggtgctgactggaaacttttgactgacgccgag
aagagacccttcattgacgaggccaagcggttacgagccatgcacatgaaggagcacccg
gattacaaataccgtccccgcaggaagaccaagaccctgctgaagaaagacaagtattct
ttgccagggggactcctggcgcccggtgccaacgctgtcaacaacgcggtgtctgtgggc
cagcggatggactacacgcacatgaacggatggacgaacagcgcatactccctcatgcag
gaccagctggcctaccctcaacatcccagcatgaacagcccccagatccagcagatgcac
cggtacgacatggcgggacttcagtacccaatgatgtccacggctcagacctacatgaac
gccgcgtccacgtacagcagcatgtcaccagcatacacgcaacaaacttccagtgcaatg
ggtttgggctccatggcttcggtgtgcaagacggagcccagctcccctcctccggccata
acctctcactctcagcgtgcttgtttgggagacctgagagatatgataagcatgtacctg
ccgcccggtggagacagcgccgaccactccagtctacagaccagtcggttacacagcgtt
catccgcactatcaaagcgcagggacaggcgtgaacggaacgctacccctaacccacatt
tga
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integrated database retrieval system
