KEGG   Danio rerio (zebrafish): 30543
Entry
30543             CDS       T01004                                 
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    30543 (sox21a)
Transcription factors [BR:dre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    30543 (sox21a)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 SOXp
Other DBs
NCBI-GeneID: 30543
NCBI-ProteinID: NP_571361
ZFIN: ZDB-GENE-990715-6
Ensembl: ENSDARG00000031664
UniProt: Q7SZS1
LinkDB
Position
6:8348594..8349664
AA seq 239 aa
MAKPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKNLIKKDRYHFNVTYNLGEGDPLKSARLSGDALSDSL
SAEKTSVAAAATRVFFSHHLSANPYPFLDLNSKISELPPAPFPHYSVLGYPSGLPAFPGM
GVLAGAPHAHPSAGSPGHMLPYNCLGWPGSGPAVPSSYVLLPGMTKAQHEPYLAYAATI
NT seq 720 nt   +upstreamnt  +downstreamnt
atggcaaagcccatggatcatgttaagcgccccatgaacgcttttatggtgtggtcgaga
gttcagaggcggaagatggctctggacaacccgaagatgcacaactcggagatcagcaag
cgcctcggaggcgaatggaaactcctgtcagactctgagaaaagacctttcattgacgag
gccaaacgactccgagccgtccacatgaaggagcacccggattacaaatacagaccgcgg
cgaaagcccaaaaacttgatcaaaaaagacaggtatcattttaatgtcacgtataatctg
ggtgagggggacccgctgaagagcgcgcgcctgtccggggacgcgctctcggactctttg
agcgcggagaaaacgtctgtcgccgccgctgctactcgggtgtttttcagccaccatctg
tccgcaaacccctatccttttctcgacctgaactctaaaatatcggaattacctcctgca
cctttcccgcattattccgtgctcgggtatcccagcggactccccgcgtttcccgggatg
ggggttctggccggtgcgccccacgctcacccgtctgcggggagtccaggtcacatgctg
ccctataactgcctgggctggccgggctctggacctgccgttccctcatcttatgtactt
ttaccaggaatgaccaaagctcagcatgaaccttacctggcatatgctgcaacgatatga

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