Danio rerio (zebrafish): 30543
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Entry
30543 CDS
T01004
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
30543 (sox21a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
30543 (sox21a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
30543
NCBI-ProteinID:
NP_571361
ZFIN:
ZDB-GENE-990715-6
Ensembl:
ENSDARG00000031664
UniProt:
Q7SZS1
LinkDB
All DBs
Position
6:8348594..8349664
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AA seq
239 aa
AA seq
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MAKPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKNLIKKDRYHFNVTYNLGEGDPLKSARLSGDALSDSL
SAEKTSVAAAATRVFFSHHLSANPYPFLDLNSKISELPPAPFPHYSVLGYPSGLPAFPGM
GVLAGAPHAHPSAGSPGHMLPYNCLGWPGSGPAVPSSYVLLPGMTKAQHEPYLAYAATI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcccatggatcatgttaagcgccccatgaacgcttttatggtgtggtcgaga
gttcagaggcggaagatggctctggacaacccgaagatgcacaactcggagatcagcaag
cgcctcggaggcgaatggaaactcctgtcagactctgagaaaagacctttcattgacgag
gccaaacgactccgagccgtccacatgaaggagcacccggattacaaatacagaccgcgg
cgaaagcccaaaaacttgatcaaaaaagacaggtatcattttaatgtcacgtataatctg
ggtgagggggacccgctgaagagcgcgcgcctgtccggggacgcgctctcggactctttg
agcgcggagaaaacgtctgtcgccgccgctgctactcgggtgtttttcagccaccatctg
tccgcaaacccctatccttttctcgacctgaactctaaaatatcggaattacctcctgca
cctttcccgcattattccgtgctcgggtatcccagcggactccccgcgtttcccgggatg
ggggttctggccggtgcgccccacgctcacccgtctgcggggagtccaggtcacatgctg
ccctataactgcctgggctggccgggctctggacctgccgttccctcatcttatgtactt
ttaccaggaatgaccaaagctcagcatgaaccttacctggcatatgctgcaacgatatga
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