Danio rerio (zebrafish): 30580
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Entry
30580 CDS
T01004
Symbol
mef2d
Name
(RefSeq) myocyte-specific enhancer factor 2D
KO
K09262
MADS-box transcription enhancer factor 2D
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
30580 (mef2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
30580 (mef2d)
04131 Membrane trafficking [BR:
dre04131
]
30580 (mef2d)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
30580 (mef2d)
Membrane trafficking [BR:
dre04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
30580 (mef2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
30580
NCBI-ProteinID:
NP_571392
ZFIN:
ZDB-GENE-990415-164
Ensembl:
ENSDARG00000040237
UniProt:
Q98870
LinkDB
All DBs
Position
16:complement(29076241..29146624)
Genome browser
AA seq
529 aa
AA seq
DB search
MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNADIIEALNKKEHRDSESPDPEEPFSLTPRTEEKYKKIDE
EFDKMMQSYRLSSTVPAPTFSMPVTVPVSNQSPLPFSNPSSLVTTSFVTSTLTDPRLLSP
QQPQLQRNTVSPGLPQRPASAGALLGGDLNNSNGACPSPVANGYVSARASPGLLSVSNGN
SMGKVVQAKSPPPPSTQMANSRKPDLRVITSQSSKGLMQLTDEELELVSENAQRLGTSQV
TQPLTTPVVSVATPSLLTPFSMPTAYNTEYQLTSADLTALQAFTPSGALLPGNMTTWQQQ
QQPSVSQQPQQQPSVSQQQTQQQQQQQQQPQQLTLASLSNLVPVGTIPHGATLTVNTNPS
ISIKSEPVSPNRDRSTPSSTPGAVGGVSGLTVSQYPGTLRLEPTGRSPVDSISSNGSSYE
GSDRDDSGQPRPPDFSSLGLLRATGDQPAQAEQQESANVKRMRLDTWVT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagatccagattcagcgaatcacagacgagcgtaacagacaggtgacc
ttcactaaacggaagtttggtctgatgaagaaagcctacgagctcagtgtgttgtgtgac
tgcgagattgccctcattattttcaatcactcaaacaagctcttccagtatgccagcact
gacatggacaaagtgctcctcaaatacacagagtacaacgagccacacgaaagcaggacc
aacgcagacatcattgaggctctgaacaagaaagagcaccgtgattcggagagcccggac
cccgaggagccgttctccctcacacctcgcacagaggagaagtacaaaaagatagacgag
gagtttgataaaatgatgcagagctataggctttcatccacagtgccagcgcccactttc
tccatgccagtcacagtgccggtgtccaatcagagcccgttgccattcagcaatccaagc
agtctcgtcaccacttccttcgtcacctcgaccctcacagacccgcgcctgctttcacca
cagcagccccagctccagaggaacacggtttctccaggcctgccacagagacccgccagc
gcaggtgctcttctgggtggtgacctcaacaattcaaatggagcgtgcccgagccctgtg
gccaatggttacgtcagtgccagggcctccccaggactcctctcagtctccaacggcaac
agcatggggaaagtagtccaggctaaatctccacctccgcccagcactcagatggcgaac
agccgcaaaccggaccttcgggtcatcacctcgcagagcagcaagggccttatgcagctg
acagatgaagagctggagttggtgagtgagaatgctcagcggttaggcacctctcaagtg
acccagcctcttaccacaccagtggtttccgtggcaacgccgagcctcctgactccattc
tctatgcccaccgcctacaacacagagtaccagctaacaagtgcagatctcacagccctc
caggcctttacgccgtcgggcgcactgttgccaggcaacatgaccacttggcaacagcag
cagcagccatctgtatcccagcaaccacagcagcagccatccgtatcccagcaacagact
cagcagcagcagcaacaacaacaacagccacagcagctcactctggcctcactcagcaac
cttgtgcccgtaggaacgatccctcacggagctactctgacggttaacactaaccccagc
attagcatcaaatccgagccagtgtctcccaaccgggaccgcagcacccctagttccacc
cccggggcagtgggtggcgtttcaggcctgacggtgagccagtatccagggacactgcgt
ttggagcccaccggccgctctccagttgacagcatcagcagtaacggcagctcatacgag
ggaagcgatcgagacgacagcggccagcctcgccctccagatttctccagcctaggtctt
ctccgagctaccggagaccagccggcccaagcagagcagcaggagtcagccaacgtgaag
cgtatgagactggacacctgggtcacataa
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