KEGG   Danio rerio (zebrafish): 30602
Entry
30602             CDS       T01004                                 
Symbol
sox11a
Name
(RefSeq) transcription factor SOX-11a
  KO
K09268  transcription factor SOX11/12 (SOX group C)
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    30602 (sox11a)
Transcription factors [BR:dre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    30602 (sox11a)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 Peptidase_S30
Other DBs
NCBI-GeneID: 30602
NCBI-ProteinID: NP_571411
ZFIN: ZDB-GENE-980526-395
Ensembl: ENSDARG00000077811
UniProt: Q9I9C8
LinkDB
Position
17:complement(35878547..35881807)
AA seq 354 aa
MVQQTDNSETDSMSREATDSDESEFMVSINPDWCKTATGHIKRPMNAFMVWSKIERRKIM
EQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKKPKLDS
SSKPSAPSPEKCSKTSKSSKKCPKLKANKTGSKSSSHGYGDEYAFKSTKVSKTVHIKSEF
TDEDDDDDSEEDSRVRVKEEEEDPIRAYNVAKVPASPTLSSSTESEGASMYEEVRNNRLY
YNFKNITKQSTMYPASVSPASSRSVSTSSSSSEDADDLLFDFSLNFASSAQSSELGSQNP
GNLSLSLVDKELESFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggtgcagcaaacggacaacagcgaaacggacagcatgtctagagaagccactgactct
gatgaaagcgaattcatggtctcgataaacccagactggtgcaagacagccaccggacac
ataaagcgaccgatgaacgcgttcatggtgtggtctaaaatcgagcggagaaagatcatg
gaacagtctccagacatgcacaacgccgagatctccaaacgcttggggaagcgctggaaa
atgctgaaagacagcgaaaagatacctttcatcagggaagccgagagactccggttgaaa
cacatggctgactaccccgactacaaatacagaccgaagaagaaaccaaagctggacagt
tcatccaaaccttcagccccgtctccggaaaagtgcagcaagacttccaagagctccaag
aaatgtcccaaactgaaagcgaacaagacggggagcaagtcgtcgtctcacggctacgga
gacgagtacgcgttcaagagcacgaaagtttcaaagactgttcacattaaaagtgaattc
acggacgaagacgacgatgacgactccgaggaggactctcgggtcagggtgaaagaggag
gaagaggatccgatacgagcctacaatgtagcaaaagttcccgccagcccaactttgagc
tcgtccaccgagtctgaaggcgccagcatgtacgaggaggtccggaacaacagactctat
tacaacttcaaaaacatcaccaagcagagcacaatgtatcccgcatccgtctcaccagca
tcctctaggtccgtttccacgtcttccagctcgagcgaagacgcggacgacttgcttttt
gacttcagtttgaacttcgcctcctccgcgcaaagctcggagctgggcagccaaaatcca
gggaatctctccctctctctggtggataaggagttggagtcttttagcgagggcagcctg
ggctcccactttgaatttccagactattgcacgcctgagctcagcgaaatgatagctggg
gactggctcgaagcgaacttttcggacttggtttttacatactaa

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