Danio rerio (zebrafish): 30606
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Entry
30606 CDS
T01004
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A
KO
K08529
retinoic acid receptor gamma
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
30606 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
dre03310
]
30606 (rarga)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
30606 (rarga)
Nuclear receptors [BR:
dre03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
30606 (rarga)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Dscam_C
Motif
Other DBs
NCBI-GeneID:
30606
NCBI-ProteinID:
NP_571414
ZFIN:
ZDB-GENE-980526-531
Ensembl:
ENSDARG00000034117
UniProt:
Q91392
LinkDB
All DBs
Position
23:38891325..39066506
Genome browser
AA seq
499 aa
AA seq
DB search
MFDCMEALGMGPRQLYDVTNRGACMLRKASPFYAGLDPFAWTGTASVRSVETQSTSSEEM
VPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQ
INKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKDEVIPPESYELSGELEELVNK
VSKAHQETFPSLCQLGKYTTNSSSDHRIQLDLGLWDKFSELSTKCIIKIVEFAKRLPGFT
TLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVF
AFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPERVDRLQEPLLEALKIYARRRRPNK
PHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFEDQSESTEKK
PEPEPPAPPPPALLTMKKEQEDEDDSWATENGSEPSPEEEDDDDEDGEEERGTDSDGEAW
GGQEPNADVSRKSHGGRAQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactgtatggaggctctgggcatgggtccccgccaactgtacgatgtcaccaac
cggggagcatgcatgcttcggaaggcgagtcctttctatgctggactggacccttttgct
tggaccgggacagccagcgtacgctcggtggagactcagagcaccagttcggaggagatg
gtgcccagttccccttccccgccacctccaccgcgtgtttacaaaccctgcttcgtctgc
caggacaagtcttctgggtaccactatggtgtcagttcttgcgagggctgcaagggtttc
ttccgtcgcagtattcagaagaacatggtgtacacctgccaccgtgacaagaactgccag
atcaacaaggtcacgcgcaaccgttgccagtactgccggctgcagaagtgcttcgaggtt
ggcatgtccaaggaagctgtgcgcaacgatcgaaataagaagaagaaagacgtgaaggat
gaggtcattccgccagagagctatgagctgagtggggaactggaggagctggtcaacaaa
gtgagcaaagcacatcaagagaccttcccttcactctgccagctgggaaaatacaccaca
aactccagctcggaccacaggattcagctagacctgggcctatgggacaaattcagtgag
ctttccaccaagtgcatcattaaaattgtggagtttgccaaacgcctcccaggcttcacc
accctcaccatcgcagatcaaatcacccttctcaaatctgcctgcttggacattctaatg
ctgcgaatctgtacacgatacacaccggagcaggacacaatgaccttttcggatggacta
accctcaaccggactcagatgcataatgcaggtttcggaccgctcactgacctggtgttt
gccttcgctggtcagcttctgcctcttgagatggatgatacggagactggcctccttagt
gccatctgcctcatatgtggagaccgaatggatcttgaagagccagagcgtgtcgatcgt
ctgcaggagcccttgctggaagctctgaagatttatgcacgacgccgccgacccaacaaa
cctcacatgttccctcgcatgctgatgaagatcactgatctacgtgggatcagcaccaag
ggagctgagagggccataactctgaagatggagatcccgggccccatgcctcctctcatc
cgagagatgctggaaaacccagaagccttcgaggatcagagcgaggccacagagaagaag
ccggagcccgaaccgccagctcctcctccacccgccctgctcacgatgaagaaagagcag
gaagatgaagacgacagctgggccacagagaacggcagcgagccttcaccagaagaggag
gatgacgatgatgaggacggagaggaggagaggggtacagacagcgatggagaggcctgg
gggggacaggaacccaacgcggatgtgtctagaaagagccacggaggaagagctcagtga
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