Danio rerio (zebrafish): 30634
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Entry
30634 CDS
T01004
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2
KO
K06550
L1 cell adhesion molecule
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
30634 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
30634 (l1cama)
04090 CD molecules [BR:
dre04090
]
30634 (l1cama)
04091 Lectins [BR:
dre04091
]
30634 (l1cama)
Cell adhesion molecules [BR:
dre04515
]
Immunoglobulin superfamily
L1 family
30634 (l1cama)
CD molecules [BR:
dre04090
]
Proteins
30634 (l1cama)
Lectins [BR:
dre04091
]
I-type lectins (Siglecs)
30634 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_3
Pur_ac_phosph_N
C2-set_2
Ig_4
Ig_6
C1-set
V-set_CD47
Sp38
Izumo-Ig
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
30634
NCBI-ProteinID:
NP_571436
ZFIN:
ZDB-GENE-990415-10
Ensembl:
ENSDARG00000007149
UniProt:
F1R9X3
Q6U7I4
LinkDB
All DBs
Position
23:28582795..28685168
Genome browser
AA seq
1271 aa
AA seq
DB search
MPATSQKQQVSSRGRCTALLLPLLLLAVALKPGNTTINIPSRYKIRDLKSPPVITAQPKS
VTTFSADDITLTCDATGNPPPTFRWVKDGVEFDPSKDPDLSVSRDSGTFSLTAKDGPIHQ
YQGRYNCYASNELGTAVSNEARIVTENTPTLQKEKIITKKVEEGESVVLPCNPPNGTVAP
VIHWMDKKLRHIQQNERVIQGRDGNLYFSHATVADSRDDYTCNIQFPSARVIKLKEPIKL
TVSSSNSVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPSPSIQWIRKDGVLSES
RTTKDSNDRVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAPYWIKEPKSQLYAP
GETVKLECKADGIPKPEVTWSINGILLSDIDPDPRRSVKHGVLTLKNVELSDTAVFQCKA
ASKHGSVLINAYVYVIELPPQILTEDGLMYSVAEGQTTELACETFGSPRPNVTWEGESWG
ALVANQRMIQLSDGSLQISNASLNDSGQYTCTVNNSKITITAELDVLNKTVIVKPPLALR
IQRGKPATLTCEYQVDSRQDLPQVQWRKNTQKLTESSDSDKYMIDESTLIIPEVEEEDEG
TYTCEVITTLDMAKASGSITIVDRPDPPSLIQMTEPKERRVTLSWTPGADHNSPVLEYLI
EFEETGSDRKEWEELSRVSGSSQRATLPLKPFISYRFRVIAINEIGKSDPSMVTEAYSTP
AAPPDSNPEGVRSDSDEPGTLVITWKEMDRRSFNGPDFHYKVMWRKVLGSGPSWHTKDIT
SPPFVVTDVGNFSAFDIKVQAVNEMGEGPEPKSIIGYSGEDYPLEAPLDVGLILINSTAI
KVTWAAVNRETVRGRLQGYKIYLTYLGPKGQHLRREPKTTFVVTTDSNEEKKVLGDLQPF
SHYNLAVSVFNYKGEGPQSESILFFTPEGVPGPPSSLMLDSPSETEMTVHWTPPNQPNGN
LIGYILQHQQLDNDASLMQVVKISDPTASHYKLKLDPHSRYRFYLRGYTAIGEGLPIIKD
GATTLDPVPPSDISISTGETSVNLTWVSKERQRNVEFFIHYLRKDGPDKWEKSEKVNSTQ
SFYTLHGLQPGSQYRLKIDFNNTKWEQEIQTAGARVMEVKSGFVTESWFIGLISALVLLL
LVLLILCFIKRSKGGKYSVKEKEEGQIDSEARPMNNEAFGEYRSLESDNEEKRTASQPSL
CEDSKLCTDDGLDDYANSNSVQTEVIMDESLASQSSGVRDVPDAETQESSPLNPATAISH
HGLPNSAALLD
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccacgtcacaaaaacagcaggtgagcagcagggggcgatgcacggctctcctg
cttcctctccttctgctagcagtggctctaaaacccgggaacaccaccatcaacatccca
tccagatacaaaataagagacttgaaaagccccccggtgattacggcccagccgaaatct
gtcaccaccttttcggctgatgacatcacgctcacctgtgatgccactgggaatccccct
cccacgttccgctgggtgaaagatggtgtggagtttgacccctctaaagaccctgacctc
tctgtatcccgagattctggcactttttcactgacagccaaagatggacccatccaccag
taccagggcagatacaactgctatgcctctaacgagctcggcacggcggtgtctaatgag
gctcgcatcgtcacagagaacactcctactctacagaaggaaaagatcattacaaagaag
gtggaggaaggagagagtgtggtgcttccctgtaatcctcctaacggcactgtagctccg
gtcatccactggatggataagaagctgcggcacattcagcaaaatgagcgtgtgattcag
ggtcgtgacgggaacctgtacttctctcatgcaactgtggcagacagtagagatgactac
acctgcaacattcagttccccagcgcacgcgtcatcaagctcaaggagccaatcaaactc
actgtttcttcctcaaactcagtggtgcggaacagaaggccacagatgatgcgtcccact
ggctccagcagctcctacctggtactcagcggacaaaacctggagctggagtgcatcgtt
cagggccttccctctcccagtatccagtggatcaggaaagatggagtcctgtctgagtca
cgcactaccaaagatagcaatgacagagttctgcgttttcaaaatatctcagagactgac
ggtggcgagtaccagtgtacggcaaccaatccacagggcatgagcactcacacctacaga
gtcacggtggaagctgctccgtattggattaaagaaccaaagagccaactgtacgcccca
ggagagactgtcaaactggaatgtaaggctgatggcattcccaaacctgaggtcacctgg
agcatcaatggcattctactttctgatattgatccagacccccgacgcagcgtgaaacat
ggcgttctcactctgaagaatgtggaactcagcgacactgcggtttttcagtgtaaagca
gccagtaaacatggatctgtcctcatcaatgcctatgtctatgttatagagctgcctcct
cagattctgacagaagacggcctcatgtactccgtggcagagggacagaccactgaattg
gcttgcgagacctttggatctcctcggcccaatgtcacatgggagggagagtcctggggc
gctcttgtagccaatcagaggatgattcagttatctgacggttctctacagatcagtaac
gcctcgctcaatgacagtggccagtacacctgcactgtcaacaacagtaaaatcaccatc
accgctgagcttgatgtactcaataagacagtgattgtgaagcctcctctggctctgcga
attcagcgggggaaaccggcaaccctcacctgcgagtaccaggtggactccagacaggac
ctccctcaagtccagtggaggaagaacacgcagaagcttacagagtcctcggattcagac
aagtacatgatagatgaatccaccctcataatacctgaggtggaagaagaggatgaaggg
acttatacatgtgaagtcattaccacactggatatggctaaagctagtggctccatcact
atcgtcgaccgaccagaccctccgagcctaatacagatgaccgaacccaaagaacgcaga
gtcactctcagctggacaccaggagcggatcacaacagccctgtgctagaatatttgatt
gagtttgaggagacgggatctgacagaaaggaatgggaagagctcagccgtgtgtccggc
agcagtcagcgagctactcttcccctaaagcccttcatttcttaccgtttccgagtcatt
gccattaatgaaatcggcaagagtgaccccagcatggttacagaggcctattccacacca
gctgctcctccagacagcaaccctgaaggagtgcgcagtgattccgacgagccaggcacc
cttgtcatcacgtggaaggagatggacaggcgtagcttcaatggcccagatttccactat
aaagtgatgtggaggaaagttttgggcagcggtccatcctggcacaccaaagacatcacc
tctccacccttcgttgtcacagatgtgggcaacttctcagcatttgacattaaagtgcaa
gcggttaatgagatgggagaaggtccggagcccaaatcaattattggatactctggggag
gactaccctcttgaggctcctctggatgtgggattgattctgatcaacagcactgctatt
aaagtgacatgggcggccgtgaacagggaaactgtgaggggtcgtctgcaggggtacaag
atttatctgacgtacttaggcccaaaaggccaacacctcagacgggagccaaaaaccaca
tttgttgtgacgacagacagtaatgaggagaagaaggttttgggagatctgcaaccgttc
tcccattacaatctggctgtaagtgtcttcaactataaaggagaaggaccccagtctgaa
tccatcttattcttcactccagaaggagttccgggtcctccatcatctttgatgttggat
agcccatcagaaacagaaatgacagtgcactggactccgcccaaccagccaaatggaaac
ctgattggatacatcttacagcatcaacaacttgataatgatgccagccttatgcaggtg
gtcaagattagtgaccccactgcttcccactacaaattaaaactggaccctcacagccgt
taccgcttctatctgcgaggatacacggctatcggagaaggactgcccatcatcaaggat
ggagccaccacactggatccagttccgccctccgacattagcatatcgactggagagaca
tcagtcaacctgacctgggtgtcaaaagaaagacagaggaacgtggaattctttattcat
tacctgagaaaggatggcccagacaaatgggagaaatctgaaaaggtgaacagcactcag
tctttctacacactgcatgggctccagcctggatcccagtaccggctgaagatcgacttt
aacaacactaaatgggagcaagagatccagactgcaggagctagagtcatggaggtgaaa
agtgggtttgtaaccgagagctggtttattggactcatcagtgccctcgtgctgttgctg
ttggtactgctcatcctgtgtttcataaaacgaagcaaaggtggaaaatactcagttaaa
gaaaaggaagaaggccaaatagattctgaagctcggccaatgaataatgaagcttttgga
gagtacagatcgctagagagtgacaatgaggagaagcgtacagccagtcagccgtctctg
tgcgaggacagtaagctatgtaccgacgatggtctagacgactacgccaacagcaacagc
gtgcagaccgaggtcatcatggacgagtcgctggccagtcaaagcagcggagtgcgagat
gttcctgatgccgagactcaggaaagttcccctctaaatcctgccacagccatctctcac
catggcctgcccaactccgccgccctccttgactag
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integrated database retrieval system
