Danio rerio (zebrafish): 30678
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Entry
30678 CDS
T01004
Symbol
pcnA
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03030
DNA replication
dre03410
Base excision repair
dre03420
Nucleotide excision repair
dre03430
Mismatch repair
dre04110
Cell cycle
dre04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
30678 (pcnA)
03410 Base excision repair
30678 (pcnA)
03420 Nucleotide excision repair
30678 (pcnA)
03430 Mismatch repair
30678 (pcnA)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
30678 (pcnA)
09144 Cellular community - eukaryotes
04530 Tight junction
30678 (pcnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dre03032
]
30678 (pcnA)
03400 DNA repair and recombination proteins [BR:
dre03400
]
30678 (pcnA)
DNA replication proteins [BR:
dre03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
30678 (pcnA)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
30678 (pcnA)
MMR (mismatch excision repair)
Other MMR factors
30678 (pcnA)
TLS (translesion DNA synthesis) factors
Other TLS factors
30678 (pcnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Motif
Other DBs
NCBI-GeneID:
30678
NCBI-ProteinID:
NP_571479
ZFIN:
ZDB-GENE-000210-8
Ensembl:
ENSDARG00000054155
UniProt:
Q9PTP1
LinkDB
All DBs
Position
10:complement(46056677..46061551)
Genome browser
AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRSDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADALALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNI
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIDEESS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggcacgtctggttcagggatctatccttaagaaggtcctggaggctctgaaa
gacctgatcaccgaggcttgctgggatgtgagctcgtcgggcatttctctgcagagtatg
gactcctctcatgtgtctctggtgcagctgacgctccggagtgacgggttcgactcctac
cgctgcgacagaaacctagccatgggggtcaatctgagcagcatgtcgaagattctgaag
tgtgctggaaatgaagacatcatcacactcagagctgaagacaatgctgacgccttggca
ctggtctttgaaacgctcaatcaagagaaagtgtccgactatgagatgaaactgatggat
ctggatgtggagcagcttggcattccagagcaggaatacagttgtgtggtgaagatgccg
tcgggtgagtttgcccgcatctgcagggatctgtcacagattggtgatgctgtcatgatc
tcgtgtgccaaggatggcgtgaagttctctgccagcggagagctgggcacaggcaacatc
aagctctcacagaccagcaacgtcgacaaggaggatgaagcggtaacaattgagatgaat
gagccagtgcagctcatttttgcattgaactacctgaacttcttcaccaaagccactcct
ctgtccaagacggtcacacttagcatgtccgcagatattccactagtggttgagtacaaa
attgcagacatgggacacgtcaaatattacctggcgcccaagatcgatgaagagtcctcc
taa
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