Danio rerio (zebrafish): 30679
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Entry
30679 CDS
T01004
Symbol
prox1a
Name
(RefSeq) prospero homeobox protein 1a isoform X1
KO
K20211
prospero homeobox 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
30679 (prox1a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain PROS
30679 (prox1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPD
NifQ
Nop25
Motif
Other DBs
NCBI-GeneID:
30679
NCBI-ProteinID:
XP_073783047
ZFIN:
ZDB-GENE-980526-397
Ensembl:
ENSDARG00000055158
LinkDB
All DBs
Position
17:complement(34527679..34571692)
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AA seq
740 aa
AA seq
DB search
MPDHDSTSLLSRQTKRRRVDIGVKRTVGQASVVFTRAKATFLSAMNPHGSEQDVECSVVQ
HADGEKSNVLRKLLKRANSYEDAVMPFPGATIISQLLKNNLTKNGGSEPNFQGSGLSSTG
SEMQQEDACSNSSRGSPQECLSPFSRPSMTQFEMERLTDEHLRAKRARVENIIRGMSHSP
SVTLRAGDNDREGAAQPPSPRENYRENKRKQKLPQQQQQSFQQLVSARKEQKHEERRQLK
LQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSDGMDNRAHDSVPDRSDNEM
SDLDPGHFLDRARALIREQSMMEGDKPKRDGSRGKSQGPTSMHAEGKQLAETLKQELNTA
MSQVVDTVVKVFAKPPRPVPQVFPPLHMESPDRFAVNGENPNFHTANQRLQCFGDVIIPN
PLDTFASMQVPNSNDQTEALPLVVRKNSSDQTGSLSTPGGHHHHPSLHPPPLSSTMGFSP
PSFRHPFPLPLMGYPFQSPLGAPTGPYPGKDRSSPESLDLSRETTSLRTKMSSNHLSHHR
SISPTHPGNEGLSLSLIKSECGDLQDMSDISPYSGSTIQEGLSPNHLKKAKLMFFYTRYP
SSNMLKMFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAINDGVTGSEELSVSRD
CELFRALNMHYNKANDFEQVPERFLEVAQITLREFFNAIVAGKDVDPSWKKAIYKVICKL
DSEVPEIFKSPNCLQELLHE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccatgacagcacatccctcttaagtagacaaaccaagagaagaagagttgac
ataggagtgaagaggactgttgggcaagcatctgtggtttttacccgcgcaaaagcaacc
tttcttagtgccatgaatccccacggttccgagcaggatgttgagtgttcagtggtgcag
cacgcagacggtgagaagtccaacgtgcttcgcaagctgttgaagagagcaaactcttac
gaagacgctgtgatgccctttccaggggcaaccatcatatctcagcttctgaaaaacaat
ttgaccaaaaatggaggcagtgagcctaatttccagggaagtggcctctcgagtaccggc
tcagagatgcagcaggaggatgcttgcagcaactcctcacggggcagccctcaggagtgc
ctttcaccattcagcaggccctccatgacccaatttgagatggagaggctaacagatgag
catctaagggccaaacgtgcccgggtggagaacatcatccgtgggatgagccattctcct
agcgtcacacttcgtgcaggagataacgatcgtgagggggcagcccaacccccgagtcct
cgtgagaactaccgggaaaacaagcgcaaacagaaactgccacagcagcagcagcagagt
tttcagcagctcgtctctgcacgcaaagaacagaaacatgaagaacggcggcaactcaaa
ctacagctggaggacatgcagaagcagctccggcaactccaagagaagttctaccagatt
tatgacagcactgactctgaaaacgatgaagatgggaacctctctgaagacagcatgcgc
tctgatggaatggacaatcgtgcccacgactctgtcccagatcgttctgacaacgaaatg
tctgacctggatccggggcactttttggatcgagcacgcgcacttattcgggagcagagc
atgatggagggggacaaacccaagcgtgatggatcaagaggaaagagccagggaccaacc
tccatgcatgcagagggcaaacaattggcagaaacgctaaaacaagagctcaatacagca
atgtcccaggtagtggacactgtggtgaaggtctttgccaagcctccacgcccagttcct
caggttttcccacccctgcacatggaatcccctgatcgtttcgcagtcaatggagaaaat
ccaaacttccatactgccaaccagcgcttgcaatgttttggtgatgtcatcattcctaat
cccctggacacttttgctagtatgcaggtgcccaactcaaatgaccaaacagaggccctg
cctttggtggtgagaaagaactcttcagatcagactgggtcactttccacacctgggggt
caccaccaccatccctctctgcaccccccacctttatcttctacaatgggttttagtcct
ccctctttccgccatcctttcccccttcctctaatgggctaccctttccaaagcccctta
ggtgccccaacagggccttacccaggaaaggataggtcttctcctgagtctctggatctg
tccagagagaccactagcctacggaccaagatgtcgtccaaccacctcagccaccatcgt
tccatctcaccaacacacccagggaatgaaggcttgtccttgtccctcataaagtcagaa
tgcggagaccttcaggacatgtcagacatctctccatattcaggaagtacaatccaagag
gggctttcgccgaaccatctgaagaaggccaagctgatgttcttctacacgcgctacccc
agctccaacatgctgaagatgttcttctcagacgtgaagtttaaccgctgcatcacatcc
cagctgatcaagtggttcagcaacttccgcgagttctactacatccagatggagaaattt
gcccggcaggccatcaatgacggcgtgacagggtcagaagagctgagcgtgagcagagac
tgcgagcttttccgtgctctcaacatgcactacaacaaggccaacgattttgagcaggtt
ccggagcgattcctggaagtggcacagatcacgttacgggagtttttcaatgccattgtg
gcaggcaaagatgttgatccttcctggaagaaggccatatacaaggtcatctgcaagctg
gacagtgaggtcccagagattttcaaatctcccaattgtctgcaggagcttctgcatgaa
tag
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